Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G004490 Citrullus lanatus HOM05D007227 ORTHO05D002252 3.7e-49 198.0 105 100.0
CsaV3_2G014630 Cucumis sativus L. HOM05D007227 ORTHO05D002252 9.4e-29 130.2 110 71.8
MELO3C020982.2 Cucumis melo HOM05D007227 ORTHO05D002252 6.3e-25 117.5 109 69.7
Sed0019925 Sechium edule HOM05D007227 ORTHO05D002252 1.2e-18 96.7 85 64.7
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 1.8e-11 72.8 101 39.6
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 1.2e-10 70.1 84 41.7
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 5.7e-10 67.8 84 39.3
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 5.7e-10 67.8 84 39.3
MD10G1078100 Malus domestica HOM05D007227 ORTHO05D002252 7.5e-10 67.4 82 39.0
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 9.8e-10 67.0 84 44.0
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.7e-09 66.2 81 44.4
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 1.7e-09 66.2 81 44.4
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 1.7e-09 66.2 84 39.3
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 2.2e-09 65.9 84 39.3
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 2.8e-09 65.5 84 39.3
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 4.9e-09 64.7 81 40.7
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 4.9e-09 64.7 85 38.8
TWI31G1433 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 8.3e-09 63.9 81 42.0
Potri.009G114400 Populus trichocarpa HOM05D007227 ORTHO05D002252 1.4e-08 63.2 95 36.8
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 1.8e-08 62.8 93 37.6
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 1.8e-08 62.8 79 46.8
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 2.4e-08 62.4 84 45.2
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 5.4e-08 61.2 82 37.8
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 9.2e-08 60.5 79 39.2
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 9.2e-08 60.5 84 42.9
Prupe.8G099800 Prunus persica HOM05D007227 ORTHO05D002252 2.0e-07 59.3 84 35.7
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 3.5e-07 58.5 81 43.2
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 3.5e-07 58.5 84 39.3
TPR.G8589 Trifolium pratense HOM05D007227 ORTHO05D002252 4.5e-07 58.2 82 35.4
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 4.5e-07 58.2 83 44.6
arahy.Tifrunner.gnm1.ann1.YB55U6 Arachis hypogaea HOM05D007227 ORTHO05D002252 7.7e-07 57.4 56 41.1
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 7.7e-07 57.4 102 35.3
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 7.7e-07 57.4 78 38.5
arahy.Tifrunner.gnm1.ann1.3LC685 Arachis hypogaea HOM05D007227 ORTHO05D002252 2.3e-06 55.8 79 39.2
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 2.3e-06 55.8 78 37.2
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 2.9e-06 55.5 78 41.0
Lsat_1_v5_gn_9_109540 Lactuca sativa HOM05D007227 ORTHO05D002252 2.9e-06 55.5 63 38.1
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 2.9e-06 55.5 77 37.7
EL10Ac9g21739 Beta vulgaris HOM05D007227 ORTHO05D002252 3.8e-06 55.1 86 36.0
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 3.8e-06 55.1 86 40.7
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 3.8e-06 55.1 76 36.8
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 3.8e-06 55.1 84 38.1
arahy.Tifrunner.gnm1.ann1.24P8DN Arachis hypogaea HOM05D007227 ORTHO05D002252 5.0e-06 54.7 79 39.2
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 5.0e-06 54.7 82 37.8
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 5.0e-06 54.7 81 37.0
Psat2g007160 Pisum sativum HOM05D007227 ORTHO05D002252 5.0e-06 54.7 79 36.7
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.6e-06 54.3 78 35.9
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 6.6e-06 54.3 82 39.0
Manes.17G100100 Manihot esculenta HOM05D007227 ORTHO05D002252 6.6e-06 54.3 84 36.9
Phvul.009G024600 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 6.6e-06 54.3 84 38.1
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 6.6e-06 54.3 88 36.4


User provided reference genes

Program Settings