Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.7e-114 416.0 211 100.0
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 5.8e-46 188.3 125 79.2
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 1.9e-44 183.3 125 71.2
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 3.2e-36 156.0 103 73.8
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 7.2e-36 154.8 124 61.3
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 2.7e-35 152.9 101 81.2
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 8.8e-34 147.9 123 58.5
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.1e-33 147.5 123 58.5
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 4.3e-33 145.6 123 57.7
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 6.3e-32 141.7 124 54.0
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.1e-31 141.0 123 54.5
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 1.4e-31 140.6 123 56.1
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 3.1e-31 139.4 119 55.5
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 3.1e-31 139.4 119 55.5
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 3.1e-31 139.4 123 52.8
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 6.9e-31 138.3 123 54.5
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 9.1e-31 137.9 123 53.7
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.5e-30 137.1 123 54.5
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.5e-30 137.1 123 54.5
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 3.4e-30 136.0 123 53.7
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.4e-30 136.0 123 53.7
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 4.5e-30 135.6 123 52.0
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 4.5e-30 135.6 124 53.2
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 5.9e-30 135.2 123 54.5
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 7.7e-30 134.8 122 52.5
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 1.0e-29 134.4 123 52.8
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 2.2e-29 133.3 123 52.8
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 2.9e-29 132.9 123 52.0
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.9e-29 132.9 120 54.2
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 3.8e-29 132.5 122 50.0
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 5.0e-29 132.1 123 52.0
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 5.0e-29 132.1 123 49.6
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 6.5e-29 131.7 115 55.7
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 6.5e-29 131.7 121 53.7
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.5e-29 131.7 123 52.0
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 6.5e-29 131.7 121 52.9
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 6.5e-29 131.7 122 50.8
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.1e-28 131.0 122 50.8
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 1.1e-28 131.0 121 52.1
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 1.4e-28 130.6 123 51.2
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.4e-28 130.6 122 50.0
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 1.9e-28 130.2 123 51.2
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 7.2e-28 128.3 123 50.4
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 1.2e-27 127.5 123 48.8
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.7e-27 126.3 122 51.6
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 3.6e-27 125.9 123 49.6
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 2.3e-26 123.2 121 49.6
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.5e-25 120.6 91 59.3
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 3.3e-25 119.4 92 56.5
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 3.3e-25 119.4 92 56.5
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 4.4e-25 119.0 122 45.9
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 4.4e-25 119.0 123 45.5
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-24 117.5 121 46.3
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.7e-24 117.1 111 51.4
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 2.8e-24 116.3 122 45.9
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 3.7e-24 115.9 121 48.8
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 2.4e-23 113.2 118 45.8
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 3.1e-23 112.8 118 46.6
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 3.1e-23 112.8 118 46.6
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 5.3e-23 112.1 123 44.7
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 7.0e-23 111.7 122 43.4
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 7.0e-23 111.7 118 44.9
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.0e-22 110.2 109 46.8
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 3.5e-22 109.4 117 45.3
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 4.5e-22 109.0 118 44.9
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 5.9e-22 108.6 93 51.6
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 5.9e-22 108.6 111 46.8
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 7.7e-22 108.2 118 44.9
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 7.7e-22 108.2 112 47.3
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.0e-21 107.8 102 50.0
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 2.2e-21 106.7 120 43.3
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.9e-21 106.3 136 44.9
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.9e-21 106.3 102 45.1
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 3.8e-21 105.9 119 43.7
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 6.5e-21 105.1 118 44.1
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 6.5e-21 105.1 118 44.9
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 1.5e-20 104.0 118 42.4
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 2.5e-20 103.2 117 43.6
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 3.2e-20 102.8 122 44.3
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 5.5e-20 102.1 118 41.5
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 7.2e-20 101.7 122 44.3
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.2e-19 100.9 122 43.4
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 2.1e-19 100.1 91 48.4
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 4.7e-19 99.0 122 43.4
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 6.1e-19 98.6 110 46.4
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 8.0e-19 98.2 113 44.2
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 1.4e-18 97.4 81 50.6
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 2.3e-18 96.7 118 39.8
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 4.0e-18 95.9 122 41.8
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 8.8e-18 94.7 121 39.7
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.5e-17 94.0 111 41.4
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.5e-17 94.0 111 41.4
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 2.0e-17 93.6 88 46.6
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 7.5e-17 91.7 116 40.5
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 7.5e-17 91.7 116 40.5
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 7.5e-17 91.7 91 49.5
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 4.8e-16 89.0 122 40.2
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 8.2e-16 88.2 100 43.0
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 7.0e-15 85.1 116 39.7
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 9.1e-15 84.7 121 38.8
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 5.9e-14 82.0 63 52.4
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.0e-13 81.3 119 37.8
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 1.0e-13 81.3 82 42.7
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 2.2e-13 80.1 120 37.5
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 3.2e-12 76.3 105 36.2
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 3.2e-12 76.3 111 37.8
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 2.1e-11 73.6 111 34.2
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 9.8e-09 64.7 44 56.8
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 2.4e-07 60.1 57 56.1


User provided reference genes

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