Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G000130 Citrullus lanatus HOM05D000684 ORTHO05D008211 5.1e-47 190.7 91 100.0
Sed0022159 Sechium edule HOM05D000684 ORTHO05D008211 4.3e-14 81.3 85 52.9
CsaV3_3G050020 Cucumis sativus L. HOM05D000684 ORTHO05D008211 9.7e-14 80.1 81 53.1
Dinv28449 Davidia involucrata HOM05D000684 ORTHO05D008211 5.3e-12 74.3 83 48.2
Ciclev10005222m.g Citrus clementina HOM05D000684 ORTHO05D008211 1.2e-11 73.2 83 44.6
PGR142G4059 Punica granatum HOM05D000684 ORTHO05D008211 2.0e-11 72.4 82 45.1
Lj1P996T30 Lonicera japonica HOM05D000684 ORTHO05D008211 4.5e-11 71.2 83 43.4
Atru.chr1.470 Acer truncatum HOM05D000684 ORTHO05D008211 5.9e-11 70.9 84 45.2
Cfa008312 Carpinus fangiana HOM05D000684 ORTHO05D008211 1.3e-10 69.7 83 45.8
Prupe.2G293400 Prunus persica HOM05D000684 ORTHO05D008211 1.7e-10 69.3 83 43.4
CiPaw.03G105600 Carya illinoinensis HOM05D000684 ORTHO05D008211 2.9e-10 68.6 83 44.6
TAR629G2342 Trochodendron aralioides HOM05D000684 ORTHO05D008211 2.9e-10 68.6 81 45.7
Haze_13723 Corylus avellana HOM05D000684 ORTHO05D008211 3.8e-10 68.2 83 44.6
Rhsim03G0180200 Rhododendron simsii HOM05D000684 ORTHO05D008211 3.8e-10 68.2 83 42.2
Hma1.2p1_3335F.1_g335320 Hydrangea macrophylla HOM05D000684 ORTHO05D008211 5.0e-10 67.8 83 42.2
Cpa.g.sc107.44 Carica papaya HOM05D000684 ORTHO05D008211 6.5e-10 67.4 91 44.0
QL09p014359 Quercus lobata HOM05D000684 ORTHO05D008211 6.5e-10 67.4 84 42.9
MD01G1199700 Malus domestica HOM05D000684 ORTHO05D008211 8.5e-10 67.0 83 42.2
vmacro06687 Vaccinium macrocarpon HOM05D000684 ORTHO05D008211 1.1e-09 66.6 83 41.0
Actinidia32866 Actinidia chinensis HOM05D000684 ORTHO05D008211 1.4e-09 66.2 80 41.2
CSS0019145 Camellia sinensis var. sinensis HOM05D000684 ORTHO05D008211 2.5e-09 65.5 83 42.2
TWI14G0609 Tripterygium wilfordii HOM05D000684 ORTHO05D008211 4.2e-09 64.7 81 43.2
TWI39G0522 Tripterygium wilfordii HOM05D000684 ORTHO05D008211 7.2e-09 63.9 83 42.2
Potri.015G143200 Populus trichocarpa HOM05D000684 ORTHO05D008211 1.2e-08 63.2 83 39.8
Gohir.A03G092300 Gossypium hirsutum HOM05D000684 ORTHO05D008211 2.1e-08 62.4 85 43.5
Gohir.D02G121100 Gossypium hirsutum HOM05D000684 ORTHO05D008211 2.1e-08 62.4 85 43.5
Gorai.005G133100 Gossypium raimondii HOM05D000684 ORTHO05D008211 2.1e-08 62.4 85 43.5
Migut.F00348 Erythranthe guttata HOM05D000684 ORTHO05D008211 2.7e-08 62.0 84 36.9
Nn6g33528 Nelumbo nucifera HOM05D000684 ORTHO05D008211 3.6e-08 61.6 81 39.5
Nn1g01438 Nelumbo nucifera HOM05D000684 ORTHO05D008211 4.7e-08 61.2 80 40.0
Potri.012G140200 Populus trichocarpa HOM05D000684 ORTHO05D008211 4.7e-08 61.2 83 39.8
Thecc.03G056400 Theobroma cacao HOM05D000684 ORTHO05D008211 4.7e-08 61.2 84 42.9
DCAR_018192 Daucus carota HOM05D000684 ORTHO05D008211 6.1e-08 60.8 84 41.7
MD07G1267700 Malus domestica HOM05D000684 ORTHO05D008211 6.1e-08 60.8 83 41.0
Manes.06G146500 Manihot esculenta HOM05D000684 ORTHO05D008211 6.1e-08 60.8 85 42.4
RcHm_v2.0_Chr1g0377161 Rosa chinensis HOM05D000684 ORTHO05D008211 7.9e-08 60.5 83 39.8
Sabra12G0105200 Salix brachista HOM05D000684 ORTHO05D008211 1.0e-07 60.1 83 39.8
MSTRG.8454 Avicennia marina HOM05D000684 ORTHO05D008211 1.4e-07 59.7 88 35.2
Oeu062752.1 Olea europaea HOM05D000684 ORTHO05D008211 1.4e-07 59.7 85 37.6
Sabra15G0152900 Salix brachista HOM05D000684 ORTHO05D008211 1.4e-07 59.7 83 38.6
MELO3C003316.2 Cucumis melo HOM05D000684 ORTHO05D008211 3.0e-07 58.5 39 66.7
PGSC0003DMG400006033 Solanum tuberosum HOM05D000684 ORTHO05D008211 3.9e-07 58.2 85 36.5
Solyc11g005190.3 Solanum lycopersicum HOM05D000684 ORTHO05D008211 5.1e-07 57.8 85 37.6
Sopen11g001190 Solanum pennellii HOM05D000684 ORTHO05D008211 5.1e-07 57.8 85 37.6
Duzib068G0819 Durio zibethinus HOM05D000684 ORTHO05D008211 6.7e-07 57.4 82 41.5
PSO782G0794 Papaver somniferum HOM05D000684 ORTHO05D008211 6.7e-07 57.4 84 41.7
unitig_749.g13761 Utricularia gibba HOM05D000684 ORTHO05D008211 1.5e-06 56.2 85 34.1
Gohir.A09G175450 Gossypium hirsutum HOM05D000684 ORTHO05D008211 2.6e-06 55.5 84 38.1
PSO478G1968 Papaver somniferum HOM05D000684 ORTHO05D008211 2.6e-06 55.5 81 42.0
Peaxi162Scf00025g00283 Petunia axillaris HOM05D000684 ORTHO05D008211 2.6e-06 55.5 84 38.1
Migut.F01124 Erythranthe guttata HOM05D000684 ORTHO05D008211 4.4e-06 54.7 81 35.8
FAN10G2450 Fragaria x ananassa HOM05D000684 ORTHO05D008211 4.4e-06 54.7 80 36.2
Nitab4.5_0002396g0010 Nicotiana tabacum HOM05D000684 ORTHO05D008211 4.4e-06 54.7 84 38.1
Gohir.1Z049363 Gossypium hirsutum HOM05D000684 ORTHO05D008211 9.7e-06 53.5 84 36.9
Gohir.D09G170242 Gossypium hirsutum HOM05D000684 ORTHO05D008211 9.7e-06 53.5 84 36.9
Gorai.006G191600 Gossypium raimondii HOM05D000684 ORTHO05D008211 9.7e-06 53.5 84 36.9


User provided reference genes

Program Settings