Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 5.7e-156 555.1 510 100.0
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 5.3e-61 239.6 484 69.2
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 1.5e-47 194.9 151 65.6
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 1.9e-34 151.4 167 59.3
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 6.8e-32 142.9 167 44.9
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 1.4e-29 135.2 173 39.3
MELO3C009102.2 Cucumis melo HOM05D007752 ORTHO05D009994 2.7e-28 131.0 123 63.4
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 3.5e-28 130.6 172 39.0
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.3e-27 128.6 490 60.2
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.7e-27 128.3 490 55.9
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 4.3e-26 123.6 141 47.5
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 7.3e-26 122.9 149 46.3
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 3.6e-25 120.6 140 49.3
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 4.4e-23 113.6 157 52.2
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 1.3e-22 112.1 173 45.1
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 2.9e-22 110.9 157 56.7
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 8.3e-22 109.4 161 38.5
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 1.9e-21 108.2 159 37.7
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 2.4e-21 107.8 153 49.0
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 2.1e-20 104.8 101 48.5
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 4.6e-20 103.6 172 34.3
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 1.0e-19 102.4 162 45.7
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 1.0e-19 102.4 162 48.8
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.0e-19 102.4 165 37.6
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 1.3e-19 102.1 142 39.4
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 3.0e-19 100.9 150 49.3
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 8.6e-19 99.4 159 38.4
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 1.1e-18 99.0 165 46.1
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 2.5e-18 97.8 135 41.5
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 5.6e-18 96.7 92 50.0
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 5.6e-18 96.7 141 39.0
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 2.8e-17 94.4 139 48.9
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 2.8e-17 94.4 158 36.1
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 4.7e-17 93.6 147 36.1
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 6.2e-17 93.2 174 42.0
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 1.1e-16 92.4 140 37.9
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 3.1e-16 90.9 141 36.9
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 3.1e-16 90.9 167 31.1
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 4.0e-16 90.5 85 49.4
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 5.2e-16 90.1 85 49.4
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 1.2e-15 89.0 138 51.4
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 2.2e-14 84.7 137 51.8
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 2.2e-14 84.7 137 35.0
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 2.9e-14 84.3 85 47.1
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 4.9e-14 83.6 82 47.6
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 4.9e-14 83.6 85 42.4
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 1.9e-13 81.6 93 41.9
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 2.4e-13 81.3 67 56.7
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 2.1e-12 78.2 167 29.9
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 2.7e-12 77.8 133 33.8
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 2.7e-12 77.8 169 32.5
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 3.5e-12 77.4 138 47.1
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 6.0e-12 76.6 139 30.9
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 6.0e-12 76.6 159 33.3
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 7.8e-12 76.3 88 44.3
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 1.7e-11 75.1 123 37.4
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.1e-10 72.4 139 33.8
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.1e-10 72.4 139 33.8
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 1.9e-10 71.6 67 50.7
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 2.5e-10 71.2 138 37.7
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 2.5e-10 71.2 77 45.5
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 3.3e-10 70.9 185 33.0
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 4.3e-10 70.5 67 52.2
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 7.3e-10 69.7 72 47.2
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 3.6e-09 67.4 67 49.3
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 1.4e-08 65.5 70 44.3
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 1.8e-08 65.1 141 32.6
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 9.0e-08 62.8 131 32.8
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.2e-06 58.2 163 30.7
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 2.2e-06 58.2 67 40.3
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 2.9e-06 57.8 139 46.0
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 2.9e-06 57.8 181 27.6
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 4.9e-06 57.0 74 37.8
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 6.4e-06 56.6 74 41.9


User provided reference genes

Program Settings