Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 0.0e+00 1081.2 523 100.0
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 5.0e-272 940.6 512 86.7
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 2.9e-264 914.8 521 83.7
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 8.5e-256 886.7 521 81.8
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 4.9e-251 870.9 520 79.8
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 7.8e-241 837.0 523 76.7
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 7.8e-241 837.0 523 76.7
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.7e-240 835.9 523 76.5
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.1e-239 833.2 523 76.3
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.5e-239 832.8 511 77.7
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 4.3e-239 831.2 509 77.4
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 5.6e-239 830.9 519 76.5
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 2.6e-236 822.0 511 76.9
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.9e-235 818.5 520 75.2
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.9e-235 817.8 520 75.0
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 4.9e-235 817.8 524 74.6
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 6.4e-235 817.4 520 75.8
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.1e-234 816.6 520 74.8
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.4e-234 816.2 515 76.3
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.2e-234 815.1 520 74.6
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.2e-234 815.1 520 74.6
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 5.4e-234 814.3 521 74.5
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 9.2e-234 813.5 511 76.1
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 2.0e-233 812.4 522 73.9
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 4.6e-233 811.2 515 75.9
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 7.8e-233 810.4 500 76.2
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.5e-231 806.2 532 73.1
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 5.6e-231 804.3 525 72.4
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 2.1e-230 802.4 511 75.9
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 3.6e-230 801.6 521 73.7
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 4.7e-230 801.2 523 73.4
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 6.2e-230 800.8 517 74.1
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 2.3e-229 798.9 521 73.9
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 3.4e-228 795.0 544 69.9
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 6.4e-227 790.8 511 73.0
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 6.4e-227 790.8 515 73.0
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 2.4e-226 788.9 521 71.2
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 3.2e-226 788.5 523 72.3
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 7.1e-226 787.3 523 72.5
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 2.1e-225 785.8 516 72.3
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 4.6e-225 784.6 517 71.6
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 5.1e-224 781.2 522 72.0
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 3.3e-223 778.5 522 71.3
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 5.6e-223 777.7 521 70.6
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 5.6e-223 777.7 498 73.7
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 7.3e-223 777.3 503 71.6
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 4.7e-222 774.6 524 73.1
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.1e-221 773.5 518 70.7
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 3.1e-221 771.9 527 71.7
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 4.0e-221 771.5 530 70.9
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 6.8e-221 770.8 522 71.1
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 8.9e-221 770.4 518 71.2
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.2e-220 770.0 505 72.3
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 3.4e-220 768.5 503 71.4
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 3.4e-220 768.5 520 71.3
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 4.4e-220 768.1 503 71.4
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 5.8e-220 767.7 522 70.9
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.7e-219 766.1 523 71.1
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 6.4e-219 764.2 521 70.1
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 1.9e-218 762.7 521 69.1
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 4.1e-218 761.5 524 71.6
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 5.4e-218 761.1 524 69.7
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 5.4e-218 761.1 521 71.0
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 9.2e-218 760.4 503 71.6
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 9.2e-218 760.4 503 71.6
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 1.1e-215 753.4 522 70.1
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.4e-213 746.5 525 70.7
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.4e-213 746.5 525 70.7
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 2.6e-212 742.3 512 70.5
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 7.6e-212 740.7 518 68.7
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.4e-210 735.7 492 72.6
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 4.2e-210 734.9 522 67.2
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 4.2e-210 734.9 592 62.7
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 7.1e-210 734.2 524 68.9
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 3.9e-208 728.4 523 67.3
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.6e-206 723.0 516 69.2
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 3.6e-206 721.8 520 67.3
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.5e-204 716.5 525 66.7
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.7e-203 713.0 524 65.8
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 4.6e-201 704.9 531 65.2
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 2.3e-200 702.6 535 64.7
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 3.0e-200 702.2 459 72.3
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 8.7e-200 700.7 516 66.5
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 1.1e-199 700.3 522 65.1
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 4.3e-199 698.4 522 64.6
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.3e-198 696.8 521 64.5
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 8.7e-192 674.1 460 70.7
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.4e-186 656.8 452 70.8
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 9.3e-186 654.1 533 61.4
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 2.1e-185 652.9 508 62.8
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.3e-184 649.4 502 64.3
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 5.1e-184 648.3 528 63.8
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 9.7e-183 644.0 514 61.3
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 3.4e-180 635.6 523 61.2
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 5.9e-180 634.8 522 60.7
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 8.5e-179 630.9 442 68.3
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.8e-176 623.2 494 59.9
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 1.3e-174 617.1 520 60.6
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 2.4e-173 612.8 363 79.6
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 6.9e-173 611.3 526 58.7
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 8.2e-166 587.8 439 65.6
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 5.7e-159 565.1 420 66.4
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 1.4e-117 427.6 267 74.5
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.0e-115 421.4 396 52.8
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.7e-115 420.6 399 51.6
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.7e-115 420.6 422 50.7
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 3.4e-111 406.4 391 51.9
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 2.3e-107 393.7 395 47.8
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.6e-73 281.2 173 74.0
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 2.2e-65 254.2 162 71.0
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 9.4e-53 212.2 130 79.2
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 3.8e-38 163.7 181 50.3
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 3.8e-38 163.7 112 70.5
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 4.8e-33 146.7 332 31.3
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.5e-23 113.6 79 62.0
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 3.5e-15 87.4 57 66.7
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 1.0e-14 85.9 78 56.4
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 1.0e-14 85.9 78 56.4
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 1.0e-14 85.9 78 56.4
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 4.9e-09 67.0 119 26.1
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 1.2e-07 62.4 83 33.7


User provided reference genes

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