Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 3.9e-54 214.5 107 100.0
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 4.3e-53 211.1 107 97.2
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 7.3e-53 210.3 107 97.2
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 1.4e-43 179.5 107 83.2
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 1.7e-41 172.6 107 74.8
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 8.4e-41 170.2 107 75.7
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 8.4e-41 170.2 107 77.6
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 1.1e-40 169.9 104 78.8
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 1.4e-40 169.5 107 75.7
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 1.4e-40 169.5 107 72.9
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 1.4e-40 169.5 107 74.8
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 1.9e-40 169.1 107 75.7
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 2.4e-40 168.7 106 75.5
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 3.2e-40 168.3 107 72.9
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 5.4e-40 167.5 105 75.2
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.4e-40 167.5 105 75.2
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 7.1e-40 167.2 107 75.7
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 7.1e-40 167.2 107 75.7
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 9.2e-40 166.8 107 74.8
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 2.1e-39 165.6 107 75.7
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 2.1e-39 165.6 107 72.0
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 2.7e-39 165.2 107 74.8
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 3.5e-39 164.9 107 72.0
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 74.3
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 72.4
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 6.0e-39 164.1 105 74.3
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 7.8e-39 163.7 105 73.3
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 7.8e-39 163.7 107 72.9
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 1.0e-38 163.3 105 72.4
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 1.0e-38 163.3 107 72.0
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.3e-38 162.9 105 73.3
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 1.3e-38 162.9 107 73.8
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 1.3e-38 162.9 107 73.8
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 1.7e-38 162.5 105 73.3
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 73.3
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 3.0e-38 161.8 105 73.3
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 71.4
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 73.3
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 3.9e-38 161.4 107 72.9
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 70.5
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 74.3
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 5.1e-38 161.0 105 72.4
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 6.6e-38 160.6 104 73.1
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 6.6e-38 160.6 105 70.5
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 6.6e-38 160.6 105 70.5
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 1.1e-37 159.8 107 74.8
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 1.5e-37 159.5 103 71.8
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 1.5e-37 159.5 105 70.5
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 1.9e-37 159.1 101 74.3
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.9e-37 159.1 107 70.1
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 2.5e-37 158.7 105 68.6
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 2.5e-37 158.7 107 71.0
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 2.5e-37 158.7 105 68.6
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 2.5e-37 158.7 107 72.9
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 2.5e-37 158.7 105 70.5
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 4.3e-37 157.9 103 71.8
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 73.3
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 4.3e-37 157.9 107 71.0
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 72.4
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 7.3e-37 157.1 105 68.6
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 7.3e-37 157.1 103 71.8
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 7.3e-37 157.1 105 72.4
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 7.3e-37 157.1 105 69.5
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 7.3e-37 157.1 105 69.5
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 7.3e-37 157.1 107 71.0
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 1.2e-36 156.4 103 69.9
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 1.2e-36 156.4 107 70.1
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.2e-36 156.4 107 70.1
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 1.2e-36 156.4 107 69.2
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 1.6e-36 156.0 103 70.9
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 1.6e-36 156.0 107 72.0
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 2.1e-36 155.6 103 69.9
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 2.1e-36 155.6 105 68.6
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 2.1e-36 155.6 107 70.1
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 2.1e-36 155.6 107 70.1
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 2.1e-36 155.6 107 69.2
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 2.1e-36 155.6 105 69.5
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 6.2e-36 154.1 103 68.9
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 6.2e-36 154.1 107 69.2
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 6.2e-36 154.1 107 69.2
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 1.1e-35 153.3 97 75.3
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 1.4e-35 152.9 105 69.5
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 5.2e-35 151.0 107 64.5
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 6.9e-35 150.6 107 66.4
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 2.6e-34 148.7 103 67.0
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 4.4e-34 147.9 107 66.4
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 7.6e-34 147.1 105 66.7
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 9.9e-34 146.7 107 67.3
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 9.9e-34 146.7 97 72.2
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 1.3e-33 146.4 105 64.8
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 1.3e-33 146.4 105 64.8
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 1.3e-33 146.4 104 67.3
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 2.9e-33 145.2 105 64.8
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 4.9e-33 144.4 102 67.6
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 6.4e-33 144.1 105 63.8
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 6.4e-33 144.1 105 64.8
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 1.1e-32 143.3 102 71.6
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 4.2e-32 141.4 97 67.0
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 1.6e-31 139.4 105 63.8
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 1.6e-31 139.4 105 62.9
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 2.1e-31 139.0 133 53.4
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 2.7e-31 138.7 105 62.9
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 6.0e-31 137.5 102 61.8
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 7.8e-31 137.1 105 61.9
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 3.3e-29 131.7 136 52.9
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 5.6e-29 131.0 94 64.9
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 1.3e-28 129.8 104 55.8
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 4.8e-28 127.9 109 60.6
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 9.0e-27 123.6 76 80.3
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 1.3e-25 119.8 103 55.3
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 1.3e-25 119.8 93 60.2
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 4.9e-25 117.9 100 53.0
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 2.4e-24 115.5 78 73.1
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 2.1e-23 112.5 77 68.8
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 6.0e-23 110.9 75 69.3
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 7.9e-23 110.5 70 78.6
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 7.9e-23 110.5 94 56.4
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.3e-22 109.8 91 59.3
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 3.0e-22 108.6 68 73.5
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 5.1e-22 107.8 76 69.7
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 6.7e-22 107.5 70 77.1
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 1.5e-21 106.3 86 64.0
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 3.3e-21 105.1 90 53.3
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 2.1e-20 102.4 97 57.7
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 1.4e-19 99.8 74 63.5
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 2.0e-18 95.9 105 49.5
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 9.9e-18 93.6 79 59.5
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.3e-17 93.2 113 48.7
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 4.6e-15 84.7 70 64.3
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 1.8e-11 72.8 79 51.9
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 4.0e-11 71.6 86 44.2
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 4.5e-10 68.2 46 63.0
ClCG10G020180 Citrullus lanatus HOM05D005747 ORTHO05D149649 8.4e-09 63.9 32 87.5
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 8.4e-09 63.9 49 65.3


User provided reference genes

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