Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 4.2e-127 458.0 226 100.0
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 7.6e-60 234.6 140 85.0
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 1.4e-58 230.3 132 88.6
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 5.7e-55 218.4 135 81.5
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 6.9e-53 211.5 137 81.0
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 1.9e-47 193.4 136 72.1
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 4.3e-47 192.2 136 70.6
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 2.2e-46 189.9 136 69.9
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 4.8e-46 188.7 137 71.5
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 4.8e-46 188.7 136 70.6
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 4.8e-46 188.7 137 72.3
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 6.3e-46 188.3 136 70.6
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 8.2e-46 188.0 136 72.8
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 3.1e-45 186.0 136 71.3
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 3.1e-45 186.0 138 69.6
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 4.1e-45 185.7 137 69.3
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 5.3e-45 185.3 136 71.3
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 6.9e-45 184.9 138 68.8
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 6.9e-45 184.9 136 66.9
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 6.9e-45 184.9 138 68.8
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 2.6e-44 183.0 136 69.9
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 2.6e-44 183.0 136 69.9
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 3.4e-44 182.6 136 69.9
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 4.5e-44 182.2 139 68.3
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 5.9e-44 181.8 141 68.1
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 5.9e-44 181.8 131 70.2
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 7.7e-44 181.4 131 70.2
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 1.0e-43 181.0 139 68.3
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 2.9e-43 179.5 138 68.1
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 2.9e-43 179.5 136 68.4
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 2.9e-43 179.5 136 67.6
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 8.5e-43 177.9 130 68.5
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.4e-42 177.2 133 67.7
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 1.4e-42 177.2 124 71.0
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 1.9e-42 176.8 136 66.2
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 1.9e-42 176.8 136 65.4
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 1.9e-42 176.8 172 57.6
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 2.5e-42 176.4 136 64.7
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 2.5e-42 176.4 136 64.7
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.2e-42 176.0 136 64.7
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 5.5e-42 175.3 136 64.7
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 5.5e-42 175.3 130 66.9
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 7.2e-42 174.9 136 67.6
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 7.2e-42 174.9 129 66.7
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 1.2e-41 174.1 135 65.2
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 1.6e-41 173.7 136 67.6
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 3.6e-41 172.6 137 65.7
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 3.6e-41 172.6 136 64.7
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 3.6e-41 172.6 142 63.4
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 4.6e-41 172.2 136 64.0
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 4.6e-41 172.2 153 60.8
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 6.1e-41 171.8 136 66.2
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.0e-40 171.0 136 65.4
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 2.3e-40 169.9 138 64.5
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 3.9e-40 169.1 136 61.0
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 3.9e-40 169.1 136 61.0
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 3.9e-40 169.1 136 61.0
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 3.9e-40 169.1 136 61.0
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 3.9e-40 169.1 136 61.0
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 3.9e-40 169.1 132 65.2
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 8.8e-40 167.9 136 60.3
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 8.8e-40 167.9 144 59.0
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 1.1e-39 167.5 124 66.1
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.5e-39 166.4 134 64.9
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 2.5e-39 166.4 138 63.0
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 2.5e-39 166.4 128 64.8
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 3.3e-39 166.0 136 60.3
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 4.3e-39 165.6 137 61.3
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 4.3e-39 165.6 135 63.7
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 4.3e-39 165.6 136 59.6
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 5.7e-39 165.2 136 59.6
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 5.7e-39 165.2 136 59.6
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 5.7e-39 165.2 136 59.6
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 5.7e-39 165.2 132 63.6
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 9.7e-39 164.5 136 58.8
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 9.7e-39 164.5 136 62.5
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 9.7e-39 164.5 136 61.8
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 4.8e-38 162.2 113 70.8
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 6.3e-38 161.8 138 61.6
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.4e-37 160.6 126 64.3
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 1.8e-37 160.2 137 58.4
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 4.1e-37 159.1 130 63.1
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 9.1e-37 157.9 126 64.3
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 2.0e-36 156.8 133 58.6
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 1.4e-34 150.6 120 66.7
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 7.2e-34 148.3 117 65.0
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 1.1e-31 141.0 113 61.1
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 2.6e-31 139.8 123 56.1
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.7e-30 137.1 113 60.2
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 4.8e-30 135.6 136 57.4
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 4.8e-30 135.6 137 49.6
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 4.1e-29 132.5 130 51.5
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 9.1e-29 131.3 112 57.1
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 1.2e-28 131.0 130 52.3
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 4.5e-28 129.0 113 58.4
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 1.0e-27 127.9 101 64.4
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 1.1e-26 124.4 105 60.0
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 7.2e-26 121.7 107 61.7
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 9.4e-26 121.3 100 65.0
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 3.6e-25 119.4 85 68.2
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.3e-24 116.7 128 45.3
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 3.3e-23 112.8 93 61.3
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 7.5e-23 111.7 135 44.4
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.7e-22 110.5 137 43.8
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 6.3e-22 108.6 136 42.6
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 3.1e-21 106.3 96 53.1
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 7.0e-21 105.1 138 41.3
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 9.1e-21 104.8 114 50.0
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 1.6e-20 104.0 124 47.6
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 1.6e-20 104.0 113 46.0
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 1.9e-18 97.1 135 44.4
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 1.2e-17 94.4 136 45.6
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 1.4e-16 90.9 73 56.2
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.5e-10 70.1 63 50.8
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 5.5e-10 68.9 64 57.8
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.4e-08 64.3 49 63.3
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 7.5e-07 58.5 58 55.2
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 9.8e-07 58.2 39 61.5
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 6.3e-06 55.5 37 59.5


User provided reference genes

Program Settings