Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 9.8e-107 390.2 205 100.0
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.7e-82 309.7 201 84.1
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 2.7e-80 302.4 201 77.6
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 3.9e-79 298.5 201 78.1
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 1.3e-66 256.9 209 69.4
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 3.8e-66 255.4 153 81.0
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 4.9e-66 255.0 205 65.4
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 1.2e-64 250.4 144 84.7
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 3.0e-63 245.7 190 71.1
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 3.0e-63 245.7 182 71.4
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 5.1e-63 245.0 211 65.9
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 8.7e-63 244.2 143 81.1
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.1e-62 243.8 148 77.0
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 2.5e-62 242.7 152 77.6
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 2.5e-62 242.7 174 77.0
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 4.3e-62 241.9 148 79.1
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 5.7e-62 241.5 210 63.8
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 9.6e-62 240.7 144 80.6
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 2.1e-61 239.6 166 69.3
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 4.8e-61 238.4 216 57.9
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 4.8e-61 238.4 151 76.2
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 8.2e-61 237.7 141 80.9
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 1.1e-60 237.3 150 77.3
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 1.4e-60 236.9 150 74.0
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 1.4e-60 236.9 211 61.6
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 1.4e-60 236.9 208 62.5
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 1.4e-60 236.9 174 74.7
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 2.4e-60 236.1 191 62.3
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 3.1e-60 235.7 220 61.4
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 6.9e-60 234.6 188 62.8
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 6.9e-60 234.6 150 74.0
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 9.0e-60 234.2 172 68.6
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 9.0e-60 234.2 154 74.0
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.2e-59 233.8 151 75.5
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.2e-59 233.8 151 75.5
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 1.2e-59 233.8 188 63.3
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 1.5e-59 233.4 181 66.9
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 3.4e-59 232.3 151 75.5
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 4.5e-59 231.9 208 63.9
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 5.9e-59 231.5 152 71.7
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.3e-58 230.3 147 75.5
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 2.9e-58 229.2 144 75.7
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 6.5e-58 228.0 150 72.7
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 6.5e-58 228.0 176 69.3
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 8.5e-58 227.6 212 60.8
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 1.1e-57 227.3 147 74.8
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 3.2e-57 225.7 171 66.1
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 3.2e-57 225.7 202 59.9
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 3.2e-57 225.7 152 71.1
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 4.2e-57 225.3 210 59.0
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 7.2e-57 224.6 153 70.6
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 1.2e-56 223.8 153 70.6
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 1.6e-56 223.4 158 72.8
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 2.1e-56 223.0 148 70.9
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 2.7e-56 222.6 147 74.1
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 3.6e-56 222.2 204 58.8
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 3.6e-56 222.2 138 78.3
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 6.1e-56 221.5 141 73.8
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 6.1e-56 221.5 145 71.0
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 7.9e-56 221.1 180 62.2
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.3e-55 220.3 210 58.1
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 2.3e-55 219.5 147 70.7
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 3.0e-55 219.2 153 68.6
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 5.1e-55 218.4 173 64.7
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 8.7e-55 217.6 209 56.9
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 8.7e-55 217.6 141 71.6
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.5e-54 216.9 210 61.4
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 1.5e-54 216.9 152 67.8
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 1.9e-54 216.5 141 71.6
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.5e-54 216.1 202 58.9
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.3e-54 215.7 210 58.1
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 4.3e-54 215.3 204 57.8
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 7.4e-54 214.5 156 66.7
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.6e-53 213.4 140 70.7
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 2.8e-53 212.6 197 58.4
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 1.4e-52 210.3 150 68.7
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 1.4e-52 210.3 178 61.2
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.4e-52 210.3 138 75.4
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 1.8e-52 209.9 145 69.0
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 9.1e-52 207.6 150 66.7
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 3.4e-51 205.7 153 66.0
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 7.7e-51 204.5 146 67.8
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.3e-50 203.8 172 60.5
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 3.9e-47 192.2 123 74.0
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 8.8e-47 191.0 148 64.2
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 2.0e-43 179.9 118 72.0
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 4.5e-43 178.7 249 43.8
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 5.9e-43 178.3 115 71.3
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 9.4e-41 171.0 110 71.8
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 3.0e-39 166.0 218 44.5
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 7.7e-35 151.4 98 70.4
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.5e-33 147.1 98 71.4
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 2.1e-32 143.3 156 46.8
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 2.6e-30 136.3 98 66.3
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 3.3e-30 136.0 98 66.3
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 5.7e-30 135.2 86 75.6
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 6.3e-29 131.7 78 78.2
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 1.1e-28 131.0 159 44.0
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 2.5e-17 93.2 118 39.8
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.9e-10 69.7 119 45.4
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.6e-08 63.9 109 41.3
THA.LOC104826924 Tarenaya hassleriana HOM05D002804 ORTHO05D003755 4.7e-08 62.4 76 48.7
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 6.1e-08 62.0 91 46.2
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.2e-06 57.8 109 39.4


User provided reference genes

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