Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 3.7e-157 558.1 276 100.0
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 6.5e-130 467.6 276 86.2
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 3.0e-127 458.8 278 84.5
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 2.6e-118 429.1 271 77.1
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 4.3e-81 305.4 272 57.0
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 5.6e-81 305.1 276 56.2
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 7.3e-81 304.7 276 56.2
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 9.6e-81 304.3 276 56.5
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 1.2e-80 303.9 272 58.5
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 6.9e-79 298.1 286 54.5
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 1.2e-78 297.4 274 56.2
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 5.8e-78 295.0 258 56.2
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 1.3e-77 293.9 207 67.6
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 2.2e-77 293.1 271 56.1
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 4.9e-77 292.0 272 54.8
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 1.1e-76 290.8 277 56.0
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 1.1e-76 290.8 277 54.9
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 1.1e-76 290.8 277 55.6
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 1.6e-75 287.0 276 54.3
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 6.0e-75 285.0 233 60.9
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 1.7e-74 283.5 276 56.2
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 5.1e-74 282.0 208 64.9
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 6.6e-74 281.6 210 63.3
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 2.5e-73 279.6 278 53.6
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 3.3e-73 279.3 205 64.9
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 5.6e-73 278.5 208 61.1
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 7.3e-73 278.1 274 55.8
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.3e-72 277.3 280 54.6
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 2.8e-72 276.2 218 61.5
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.8e-72 276.2 281 53.7
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 8.1e-72 274.6 272 53.3
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.4e-71 273.9 274 56.9
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 2.4e-71 273.1 202 64.9
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 3.1e-71 272.7 273 53.5
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 3.1e-71 272.7 212 59.9
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 4.0e-71 272.3 272 50.4
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 5.3e-71 271.9 274 56.9
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 6.9e-71 271.6 278 51.8
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 1.2e-70 270.8 278 52.5
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.2e-70 270.8 278 52.5
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 1.2e-70 270.8 276 53.3
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 3.4e-70 269.2 203 62.6
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 3.4e-70 269.2 274 56.2
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 3.4e-70 269.2 204 60.8
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 5.8e-70 268.5 284 51.1
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 9.9e-70 267.7 281 54.8
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 9.9e-70 267.7 275 52.0
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 4.9e-69 265.4 224 58.0
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.9e-69 265.4 282 50.4
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 8.4e-69 264.6 193 65.8
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.4e-68 263.1 278 51.4
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 5.4e-68 261.9 265 51.7
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 7.1e-68 261.5 274 50.0
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 1.2e-67 260.8 278 53.2
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 1.6e-67 260.4 231 56.3
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 2.1e-67 260.0 265 51.3
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 2.7e-67 259.6 213 61.0
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 4.6e-67 258.8 207 61.4
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 7.9e-67 258.1 277 52.0
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.3e-66 257.3 273 49.1
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 1.3e-66 257.3 248 52.0
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 1.8e-66 256.9 213 60.6
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 6.7e-66 255.0 222 58.1
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 1.5e-65 253.8 211 55.9
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 1.9e-65 253.4 285 47.7
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 3.3e-65 252.7 199 60.3
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 5.6e-65 251.9 207 60.4
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 9.6e-65 251.1 198 62.1
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 9.6e-65 251.1 211 57.3
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.7e-64 249.2 222 57.7
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 4.8e-64 248.8 198 61.6
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.1e-63 247.7 208 58.2
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 5.3e-63 245.4 202 59.4
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 5.3e-63 245.4 207 58.9
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 6.9e-63 245.0 198 61.1
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 1.5e-62 243.8 208 56.7
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 1.5e-62 243.8 208 56.7
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.5e-62 243.8 207 58.5
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 2.6e-62 243.0 280 49.6
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 5.8e-62 241.9 200 58.5
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 1.7e-61 240.4 207 57.0
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 1.7e-61 240.4 207 57.0
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 1.7e-61 240.4 207 57.0
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 6.4e-61 238.4 281 49.1
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 4.2e-60 235.7 271 49.1
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 5.5e-60 235.3 219 55.3
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 1.8e-58 230.3 225 52.9
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 4.8e-56 222.2 203 56.2
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 2.0e-54 216.9 270 47.0
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 4.5e-54 215.7 195 54.4
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.0e-53 214.5 203 50.2
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 3.8e-53 212.6 214 50.9
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 6.5e-53 211.8 209 52.2
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 1.0e-50 204.5 207 50.7
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 6.7e-50 201.8 264 43.2
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 6.7e-50 201.8 230 48.3
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.4e-46 189.5 153 62.7
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 1.0e-45 188.0 185 54.6
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 6.5e-45 185.3 198 52.5
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 5.5e-44 182.2 207 44.9
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 5.5e-44 182.2 192 47.4
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 1.6e-43 180.6 224 46.0
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.7e-40 170.6 150 54.7
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 3.3e-33 146.4 223 37.2
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.2e-30 137.9 165 47.3
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 8.5e-29 131.7 203 36.9
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 8.5e-21 105.1 185 31.4
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.9e-20 104.0 192 36.5
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 6.7e-18 95.5 75 58.7
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 4.4e-17 92.8 158 32.9
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 7.5e-17 92.0 72 59.7
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.7e-14 83.6 143 35.7
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 3.5e-14 83.2 148 34.5
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.9e-13 80.1 63 55.6
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 5.7e-09 65.9 69 50.7
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 1.7e-08 64.3 69 49.3


User provided reference genes

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