Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 7.5e-258 893.3 428 100.0
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 3.2e-200 701.8 428 82.2
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 5.5e-192 674.5 428 79.0
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 1.1e-184 650.2 428 75.0
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 2.5e-184 649.0 428 74.5
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.2e-184 648.7 428 74.8
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 5.5e-184 647.9 428 75.2
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 9.3e-184 647.1 428 75.0
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 9.3e-184 647.1 428 74.5
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.6e-183 646.4 428 75.0
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.6e-183 646.4 428 75.0
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 6.0e-183 644.4 428 74.3
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 1.3e-182 643.3 428 74.3
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.8e-182 642.9 428 74.5
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 2.3e-182 642.5 428 74.8
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 6.7e-182 641.0 428 73.8
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 8.7e-182 640.6 426 74.2
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 8.7e-182 640.6 428 74.1
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.1e-181 640.2 428 75.0
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.9e-181 639.4 426 73.9
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 3.3e-181 638.6 428 73.8
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 5.7e-181 637.9 428 73.6
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 7.4e-181 637.5 425 74.4
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.6e-180 636.3 428 73.8
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 1.6e-180 636.3 428 72.7
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.2e-180 636.0 424 73.3
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 2.8e-180 635.6 425 73.6
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 3.7e-180 635.2 424 73.8
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 3.7e-180 635.2 424 73.1
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 3.7e-180 635.2 428 73.8
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 4.8e-180 634.8 428 73.4
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 6.3e-180 634.4 428 73.6
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 6.3e-180 634.4 428 73.8
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.4e-179 632.5 428 72.7
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 4.1e-179 631.7 428 72.0
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 6.9e-179 630.9 428 72.9
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 9.0e-179 630.6 425 73.2
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 2.0e-178 629.4 425 72.7
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 2.0e-178 629.4 428 73.4
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 2.0e-178 629.4 428 73.8
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 7.7e-178 627.5 428 72.2
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 7.7e-178 627.5 428 72.4
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 2.2e-177 625.9 463 68.9
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.1e-176 623.6 426 72.5
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.4e-176 623.2 425 72.7
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 3.2e-176 622.1 428 71.7
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 3.2e-176 622.1 428 71.0
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.2e-175 620.2 427 72.8
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 2.7e-175 619.0 428 71.0
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 4.6e-175 618.2 428 71.0
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 6.1e-175 617.8 426 71.6
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 3.0e-174 615.5 427 72.4
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 3.0e-174 615.5 425 72.0
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 5.1e-174 614.8 427 71.9
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 5.1e-174 614.8 427 71.9
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 8.8e-174 614.0 427 71.7
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.1e-173 613.6 428 71.7
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 2.5e-173 612.5 428 70.6
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 4.3e-173 611.7 472 66.1
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 5.7e-173 611.3 426 70.4
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 5.7e-173 611.3 428 70.3
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 7.4e-173 610.9 427 71.4
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 7.4e-173 610.9 456 66.9
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 7.4e-173 610.9 429 70.9
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 1.8e-171 606.3 426 69.2
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 2.4e-171 605.9 426 69.2
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 5.3e-171 604.7 427 70.7
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 1.2e-170 603.6 426 69.5
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 1.2e-170 603.6 426 69.5
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 1.2e-170 603.6 426 69.5
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 1.5e-170 603.2 426 69.2
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 2.0e-170 602.8 424 69.6
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 2.6e-170 602.4 425 70.1
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 4.5e-170 601.7 426 69.0
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.2e-169 599.4 426 68.8
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 3.8e-169 598.6 428 69.2
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 3.2e-168 595.5 407 72.2
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 4.2e-168 595.1 426 69.0
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 5.5e-168 594.7 428 69.2
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 3.6e-167 592.0 443 66.4
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 6.1e-167 591.3 424 69.6
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.4e-166 590.1 424 69.1
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 2.0e-165 586.3 426 68.1
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.3e-165 585.5 427 69.3
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 3.3e-165 585.5 424 67.7
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 7.4e-165 584.3 426 67.8
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 9.7e-165 583.9 426 67.8
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.7e-164 583.2 428 67.5
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 4.8e-164 581.6 428 67.3
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 1.8e-163 579.7 425 67.3
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 3.0e-158 562.4 433 63.3
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 3.0e-158 562.4 433 63.7
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 6.7e-158 561.2 424 64.6
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 6.7e-158 561.2 427 66.0
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 6.3e-156 554.7 380 73.9
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.2e-154 550.4 313 84.0
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 3.2e-152 542.3 313 83.7
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.2e-151 540.4 403 66.7
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.4e-150 537.0 428 63.8
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 9.4e-144 514.2 391 68.3
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 3.0e-142 509.2 379 68.6
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 4.0e-142 508.8 395 65.8
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.6e-138 496.9 424 59.4
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 6.6e-137 491.5 425 57.9
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 5.2e-134 481.9 425 58.6
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 2.2e-132 476.5 424 56.6
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 7.8e-130 468.0 320 75.9
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 2.7e-122 443.0 435 53.6
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.5e-120 437.2 428 55.8
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 4.0e-118 429.1 309 71.5
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.0e-117 426.8 433 54.7
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 4.1e-107 392.5 222 83.8
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.6e-103 380.6 309 63.8
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.1e-95 353.6 261 67.8
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 3.4e-69 266.5 220 64.1
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 8.7e-65 251.9 163 71.8
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 8.5e-60 235.3 165 68.5
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 3.0e-57 226.9 122 82.0
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 3.3e-56 223.4 126 80.2
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 2.8e-47 193.7 337 38.0
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 2.1e-42 177.6 263 42.6
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 3.3e-40 170.2 98 84.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 1.6e-34 151.4 86 86.0
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 1.8e-25 121.3 61 88.5
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 5.0e-20 103.2 79 67.1
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.1e-19 102.1 167 39.5
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 9.8e-16 89.0 51 74.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 3.7e-15 87.0 39 92.3
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 9.2e-14 82.4 130 43.1
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 3.7e-07 60.5 297 24.9


User provided reference genes

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