Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 3.0e-142 508.4 250 100.0
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 1.1e-115 420.2 250 83.6
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 2.5e-104 382.5 249 79.5
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 4.9e-68 261.9 246 56.9
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 2.7e-66 256.1 220 59.5
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.8e-65 253.4 240 58.3
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 3.0e-65 252.7 176 68.8
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 3.9e-65 252.3 246 54.1
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 8.7e-65 251.1 198 61.6
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.5e-64 249.6 248 57.3
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 3.3e-64 249.2 252 54.8
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 4.3e-64 248.8 235 57.0
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 7.4e-64 248.1 253 54.2
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 9.6e-64 247.7 175 68.0
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.3e-63 247.3 249 54.6
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 1.6e-63 246.9 209 58.9
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 2.1e-63 246.5 248 52.4
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 2.1e-63 246.5 248 56.5
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 2.8e-63 246.1 201 63.7
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 2.8e-63 246.1 236 55.9
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 1.1e-62 244.2 242 54.5
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 1.8e-62 243.4 258 54.3
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 2.4e-62 243.0 241 56.0
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 2.4e-62 243.0 236 55.5
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 3.1e-62 242.7 199 58.8
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 4.0e-62 242.3 203 59.6
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 4.0e-62 242.3 215 56.3
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.3e-62 241.9 233 56.2
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 5.3e-62 241.9 204 57.4
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 6.9e-62 241.5 247 53.0
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 6.9e-62 241.5 199 59.3
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 6.9e-62 241.5 199 63.3
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 6.9e-62 241.5 199 64.3
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 6.9e-62 241.5 173 65.3
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 6.9e-62 241.5 229 55.9
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 9.0e-62 241.1 235 54.9
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.2e-61 240.7 199 63.3
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.0e-61 240.0 260 52.7
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 5.8e-61 238.4 250 53.2
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 7.6e-61 238.0 248 51.2
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 7.6e-61 238.0 247 52.6
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 1.0e-60 237.7 239 54.0
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.3e-60 237.3 190 58.4
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 1.7e-60 236.9 249 51.8
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 4.9e-60 235.3 234 51.3
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.1e-59 234.2 197 58.9
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 1.1e-59 234.2 185 62.2
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 1.4e-59 233.8 250 50.4
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 1.4e-59 233.8 202 58.9
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 1.4e-59 233.8 234 52.1
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 1.9e-59 233.4 259 52.1
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 2.5e-59 233.0 251 49.4
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 2.5e-59 233.0 196 59.7
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 3.2e-59 232.6 186 59.7
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 4.2e-59 232.3 249 51.4
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 9.3e-59 231.1 254 49.2
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 9.3e-59 231.1 201 58.7
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 2.1e-58 229.9 244 51.6
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 2.7e-58 229.6 185 60.5
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 3.5e-58 229.2 173 61.8
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 4.6e-58 228.8 251 48.6
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 6.0e-58 228.4 249 52.6
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.3e-57 227.3 235 50.6
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.8e-57 226.9 255 48.2
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 2.3e-57 226.5 236 49.2
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 3.9e-57 225.7 250 50.4
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 5.1e-57 225.3 200 57.0
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 1.5e-56 223.8 185 57.8
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.9e-56 223.4 248 50.0
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 2.5e-56 223.0 244 50.8
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.3e-55 220.7 244 47.5
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.6e-55 220.3 247 47.0
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 2.1e-55 219.9 246 50.0
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 8.2e-55 218.0 257 47.9
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 8.2e-55 218.0 270 48.1
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 8.2e-55 218.0 195 60.5
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 4.1e-54 215.7 202 55.4
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 5.3e-54 215.3 192 57.8
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 5.9e-53 211.8 190 55.8
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 5.9e-53 211.8 206 50.5
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 8.5e-52 208.0 182 54.9
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 7.2e-51 204.9 190 52.1
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 1.0e-49 201.1 201 51.7
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 2.4e-46 189.9 171 51.5
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 1.0e-44 184.5 179 54.7
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 4.2e-43 179.1 118 69.5
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 4.6e-42 175.6 147 55.1
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.6e-34 150.6 124 64.5
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 5.7e-32 142.1 154 51.9
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 2.2e-28 130.2 117 54.7
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 1.8e-25 120.6 118 52.5
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.3e-25 120.2 119 52.1
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 5.2e-25 119.0 163 39.3
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 4.4e-16 89.4 57 70.2
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 1.4e-14 84.3 107 46.7
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 8.6e-12 75.1 64 53.1
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 4.7e-10 69.3 81 48.1
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 3.7e-07 59.7 65 47.7
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 4.1e-06 56.2 46 54.3
Pp3s30_790 Physcomitrium patens HOM05D002374 ORTHO05D003594 7.0e-06 55.5 98 32.7


User provided reference genes

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