Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G015920 Citrullus lanatus HOM05D007691 ORTHO05D008758 7.0e-41 170.2 90 100.0
CsaV3_3G040570 Cucumis sativus L. HOM05D007691 ORTHO05D008758 6.4e-26 120.6 97 75.3
Sed0014810 Sechium edule HOM05D007691 ORTHO05D008758 4.4e-19 97.8 92 63.0
Sed0006259 Sechium edule HOM05D007691 ORTHO05D008758 1.4e-17 92.8 82 64.6
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 3.0e-15 85.1 84 58.3
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 5.6e-14 80.9 87 51.7
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 3.1e-12 75.1 88 53.4
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 5.3e-12 74.3 81 55.6
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 9.0e-12 73.6 91 49.5
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.2e-11 73.2 87 48.3
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 2.6e-11 72.0 92 51.1
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 5.8e-11 70.9 91 47.3
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 5.8e-11 70.9 91 50.5
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 7.6e-11 70.5 91 50.5
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 9.9e-11 70.1 92 46.7
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 9.9e-11 70.1 85 49.4
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 1.7e-10 69.3 89 48.3
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 3.8e-10 68.2 79 53.2
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 3.8e-10 68.2 91 45.1
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 8.4e-10 67.0 85 49.4
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 8.4e-10 67.0 86 44.2
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 1.4e-09 66.2 99 47.5
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 1.4e-09 66.2 84 52.4
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 3.2e-09 65.1 85 48.2
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 4.2e-09 64.7 88 47.7
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 4.2e-09 64.7 76 48.7
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 7.1e-09 63.9 86 48.8
Sc15g0006900 Simmondsia chinensis HOM05D007691 ORTHO05D008758 9.3e-09 63.5 88 45.5
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 1.2e-08 63.2 90 47.8
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 6.0e-08 60.8 86 45.3
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 6.0e-08 60.8 105 40.0
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 6.0e-08 60.8 97 42.3
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 7.8e-08 60.5 84 46.4
MD14G1010100 Malus domestica HOM05D007691 ORTHO05D008758 7.8e-08 60.5 77 45.5
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 7.8e-08 60.5 95 47.4
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 7.8e-08 60.5 85 48.2
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 1.0e-07 60.1 85 48.2
SalBow1G6856 Salvia bowleyana HOM05D007691 ORTHO05D008758 1.0e-07 60.1 69 46.4
Gohir.A08G220400 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.7e-07 59.3 88 43.2
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 3.0e-07 58.5 91 46.2
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 3.9e-07 58.2 91 44.0
Gorai.004G252600 Gossypium raimondii HOM05D007691 ORTHO05D008758 3.9e-07 58.2 78 42.3
Nitab4.5_0007090g0010 Nicotiana tabacum HOM05D018532 ORTHO05D008758 5.1e-07 57.8 75 45.3
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 6.6e-07 57.4 90 43.3
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 8.7e-07 57.0 94 41.5
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 1.1e-06 56.6 86 44.2
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.9e-06 55.8 91 46.2
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 1.9e-06 55.8 88 47.7
MD12G1012300 Malus domestica HOM05D007691 ORTHO05D008758 1.9e-06 55.8 80 43.8
Sopen03g029460 Solanum pennellii HOM05D018532 ORTHO05D008758 1.9e-06 55.8 86 44.2
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 2.5e-06 55.5 87 47.1
PGR142G1160 Punica granatum HOM05D007691 ORTHO05D008758 2.5e-06 55.5 85 43.5
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 3.3e-06 55.1 87 46.0
PGR142G3022 Punica granatum HOM05D007691 ORTHO05D008758 4.3e-06 54.7 85 44.7
Duzib128G0872 Durio zibethinus HOM05D014272 ORTHO05D008758 9.6e-06 53.5 89 39.3


User provided reference genes

Program Settings