Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 3.7e-64 248.1 127 100.0
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 3.5e-54 214.9 127 86.6
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 1.5e-49 199.5 119 85.7
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 3.2e-39 165.2 127 73.2
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 1.5e-28 129.8 118 58.5
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 4.3e-28 128.3 118 58.5
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 9.6e-28 127.1 126 54.0
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 3.7e-27 125.2 111 59.5
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 6.2e-27 124.4 110 57.3
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.1e-26 123.6 86 68.6
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 1.4e-26 123.2 85 68.2
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 2.4e-26 122.5 116 55.2
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 9.0e-26 120.6 137 51.1
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 9.0e-26 120.6 89 66.3
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 1.2e-25 120.2 129 51.2
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 1.2e-25 120.2 123 52.8
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 1.2e-25 120.2 138 50.0
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.5e-25 118.2 122 53.3
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 4.5e-25 118.2 122 53.3
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 5.8e-25 117.9 86 64.0
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 5.8e-25 117.9 110 55.5
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 5.8e-25 117.9 122 53.3
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.0e-24 117.1 130 50.8
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.0e-24 117.1 130 50.8
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 1.7e-24 116.3 103 53.4
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.7e-24 116.3 114 54.4
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.7e-24 116.3 88 65.9
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 1.7e-24 116.3 130 52.3
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.2e-24 115.9 110 55.5
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 2.2e-24 115.9 129 51.2
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 2.2e-24 115.9 115 53.0
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 3.8e-24 115.2 105 60.0
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 3.8e-24 115.2 71 74.6
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.8e-24 115.2 130 50.0
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 3.8e-24 115.2 116 56.0
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 4.9e-24 114.8 86 65.1
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 4.9e-24 114.8 117 53.0
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 6.5e-24 114.4 129 49.6
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 8.4e-24 114.0 86 64.0
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 8.4e-24 114.0 89 60.7
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 8.4e-24 114.0 142 45.8
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 1.1e-23 113.6 131 51.1
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.4e-23 113.2 139 48.2
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.5e-23 112.5 68 77.9
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 3.2e-23 112.1 88 65.9
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 4.2e-23 111.7 108 56.5
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 5.5e-23 111.3 124 50.0
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 7.1e-23 110.9 83 66.3
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 7.1e-23 110.9 112 53.6
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 7.1e-23 110.9 137 50.4
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 9.3e-23 110.5 104 60.6
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 1.6e-22 109.8 65 76.9
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 2.1e-22 109.4 70 70.0
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.7e-22 109.0 80 65.0
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.7e-22 109.0 69 73.9
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 3.5e-22 108.6 71 69.0
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 4.6e-22 108.2 77 64.9
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.0e-21 107.1 89 57.3
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 1.3e-21 106.7 63 76.2
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 3.0e-21 105.5 102 53.9
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 3.0e-21 105.5 65 73.8
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 3.0e-21 105.5 115 51.3
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 3.9e-21 105.1 127 52.0
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 5.1e-21 104.8 66 71.2
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 6.7e-21 104.4 63 74.6
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 6.7e-21 104.4 63 74.6
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 6.7e-21 104.4 114 48.2
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 8.7e-21 104.0 63 74.6
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 1.1e-20 103.6 65 70.8
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.1e-20 103.6 96 52.1
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 2.5e-20 102.4 126 47.6
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 4.3e-20 101.7 63 74.6
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 7.4e-20 100.9 63 73.0
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 7.4e-20 100.9 118 47.5
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 9.7e-20 100.5 67 68.7
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 9.7e-20 100.5 121 46.3
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.3e-19 100.1 108 50.9
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.3e-19 100.1 108 50.9
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 1.3e-19 100.1 109 53.2
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 1.6e-19 99.8 75 65.3
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 2.8e-19 99.0 62 74.2
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 6.3e-19 97.8 67 67.2
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 6.3e-19 97.8 72 63.9
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 8.2e-19 97.4 125 43.2
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 8.2e-19 97.4 71 63.4
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.4e-18 96.7 77 63.6
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 1.8e-18 96.3 86 52.3
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 4.1e-18 95.1 74 62.2
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 6.9e-18 94.4 82 52.4
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 9.0e-18 94.0 86 50.0
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 4.5e-17 91.7 65 66.2
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 7.6e-17 90.9 83 55.4
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 7.6e-17 90.9 91 48.4
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 7.6e-17 90.9 91 48.4
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 7.6e-17 90.9 91 48.4
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 1.3e-16 90.1 69 63.8
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.7e-16 89.7 65 63.1
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.7e-16 89.7 64 67.2
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.7e-16 89.7 64 67.2
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 5.0e-16 88.2 68 57.4
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.1e-15 87.0 67 58.2
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.9e-15 86.3 66 60.6
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 7.2e-15 84.3 89 51.7
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 4.3e-12 75.1 73 50.7
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 9.7e-12 73.9 51 64.7
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.3e-11 73.6 64 53.1
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.4e-10 70.1 69 52.2


User provided reference genes

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