Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G015220 Citrullus lanatus HOM05D008101 ORTHO05D010163 5.1e-32 140.6 77 100.0
Cc07_g03530 Coffea canephora HOM05D008101 ORTHO05D010163 4.2e-10 67.8 48 79.2
CiPaw.03G024700 Carya illinoinensis HOM05D008101 ORTHO05D010163 5.5e-10 67.4 44 79.5
Gohir.A07G206000 Gossypium hirsutum HOM05D008101 ORTHO05D010163 9.4e-10 66.6 48 75.0
Thecc.04G085600 Theobroma cacao HOM05D008101 ORTHO05D010163 9.4e-10 66.6 50 74.0
Gohir.D07G212050 Gossypium hirsutum HOM05D008101 ORTHO05D010163 1.2e-09 66.2 48 72.9
Gorai.001G239800 Gossypium raimondii HOM05D008101 ORTHO05D010163 1.2e-09 66.2 48 72.9
CSS0047461 Camellia sinensis var. sinensis HOM05D008101 ORTHO05D010163 1.6e-09 65.9 44 75.0
Dinv33773 Davidia involucrata HOM05D008101 ORTHO05D010163 2.7e-09 65.1 48 68.8
Potri.010G234200 Populus trichocarpa HOM05D008101 ORTHO05D010163 4.6e-09 64.3 44 72.7
MD09G1053300 Malus domestica HOM05D008101 ORTHO05D010163 1.0e-08 63.2 44 75.0
RcHm_v2.0_Chr2g0167591 Rosa chinensis HOM05D008101 ORTHO05D010163 3.9e-08 61.2 51 64.7
RcHm_v2.0_Chr2g0167541 Rosa chinensis HOM05D008101 ORTHO05D010163 5.1e-08 60.8 50 66.0
Manes.02G047600 Manihot esculenta HOM05D008101 ORTHO05D010163 6.7e-08 60.5 49 67.3
Nn4g23220 Nelumbo nucifera HOM05D008101 ORTHO05D010163 8.8e-08 60.1 44 65.9
RcHm_v2.0_Chr2g0167501 Rosa chinensis HOM05D008101 ORTHO05D010163 1.1e-07 59.7 50 64.0
Nn3g17291 Nelumbo nucifera HOM05D008101 ORTHO05D010163 1.5e-07 59.3 44 68.2
THA.LOC109116617 Tarenaya hassleriana HOM05D008101 ORTHO05D010163 2.6e-07 58.5 46 63.0
Prupe.3G265300 Prunus persica HOM05D008101 ORTHO05D010163 5.7e-07 57.4 44 65.9
Rhsim10G0036400 Rhododendron simsii HOM05D018356 ORTHO05D010163 7.4e-07 57.0 68 50.0
Sed0001905 Sechium edule HOM05D008101 ORTHO05D010163 7.4e-07 57.0 54 59.3
Migut.H00938 Erythranthe guttata HOM05D008101 ORTHO05D010163 1.3e-06 56.2 44 65.9
Phvul.004G030000 Phaseolus vulgaris HOM05D008101 ORTHO05D010163 1.3e-06 56.2 50 58.0
FvH4_6g48300 Fragaria vesca HOM05D008101 ORTHO05D010163 2.8e-06 55.1 39 69.2
FAN09G0090 Fragaria x ananassa HOM05D008101 ORTHO05D010163 2.8e-06 55.1 39 69.2
FAN14G5148 Fragaria x ananassa HOM05D008101 ORTHO05D010163 2.8e-06 55.1 39 69.2
Medtr6g012640 Medicago truncatula HOM05D008101 ORTHO05D010163 3.7e-06 54.7 44 65.9
Solyc02g088130.1 Solanum lycopersicum HOM05D008101 ORTHO05D010163 3.7e-06 54.7 44 65.9
Sopen02g032840 Solanum pennellii HOM05D008101 ORTHO05D010163 3.7e-06 54.7 44 65.9
Glyma.13G062100 Glycine max HOM05D008101 ORTHO05D010163 4.8e-06 54.3 54 51.9
SalBow1G0549 Salvia bowleyana HOM05D008101 ORTHO05D010163 4.8e-06 54.3 44 65.9
SalBow1G6176 Salvia bowleyana HOM05D008101 ORTHO05D010163 4.8e-06 54.3 44 65.9
SalBow8G3752 Salvia bowleyana HOM05D008101 ORTHO05D010163 8.2e-06 53.5 44 65.9


User provided reference genes

Program Settings