Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G015200 Citrullus lanatus HOM05D008206 ORTHO05D010320 2.7e-42 174.9 85 100.0
CsaV3_3G041320 Cucumis sativus L. HOM05D008206 ORTHO05D010320 6.7e-33 143.7 87 85.1
MELO3C009860.2 Cucumis melo HOM05D008206 ORTHO05D010320 1.1e-24 116.3 98 68.4
Sed0021124 Sechium edule HOM05D008206 ORTHO05D010320 3.1e-14 81.6 56 62.5
Cpa.g.sc14.94 Carica papaya HOM05D008206 ORTHO05D010320 6.5e-12 73.9 85 49.4
MD00G1125200 Malus domestica HOM05D008206 ORTHO05D010320 6.5e-12 73.9 80 46.2
FAN02G1369 Fragaria x ananassa HOM05D008206 ORTHO05D010320 7.2e-11 70.5 83 51.8
TAR629G1342 Trochodendron aralioides HOM05D008206 ORTHO05D010320 1.2e-10 69.7 81 50.6
CiPaw.03G025300 Carya illinoinensis HOM05D008206 ORTHO05D010320 1.6e-10 69.3 82 51.2
FvH4_6g48260 Fragaria vesca HOM05D008206 ORTHO05D010320 2.1e-10 68.9 83 50.6
FAN05G0177 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.1e-10 68.9 83 50.6
FAN05G4857 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.1e-10 68.9 83 50.6
Haze_14514 Corylus avellana HOM05D008206 ORTHO05D010320 2.7e-10 68.6 81 50.6
FAN14G5696 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.7e-10 68.6 83 50.6
Prupe.3G266100 Prunus persica HOM05D008206 ORTHO05D010320 4.6e-10 67.8 83 47.0
FAN09G1639 Fragaria x ananassa HOM05D008206 ORTHO05D010320 6.1e-10 67.4 83 49.4
GSVIVG01011434001 Vitis vinifera HOM05D008206 ORTHO05D010320 6.1e-10 67.4 80 48.8
MD09G1052600 Malus domestica HOM05D008206 ORTHO05D010320 1.0e-09 66.6 83 44.6
ClCG09G018150 Citrullus lanatus HOM05D041357 ORTHO05D010320 2.3e-09 65.5 78 46.2
Cfa007572 Carpinus fangiana HOM05D008206 ORTHO05D010320 5.1e-09 64.3 81 49.4
CsaV3_5G038110 Cucumis sativus L. HOM05D041357 ORTHO05D010320 6.7e-09 63.9 81 45.7
RcHm_v2.0_Chr2g0167761 Rosa chinensis HOM05D008206 ORTHO05D010320 6.7e-09 63.9 83 48.2
CANSAT64G2007 Cannabis sativa HOM05D008206 ORTHO05D010320 8.8e-09 63.5 88 47.7
Psat3g197800 Pisum sativum HOM05D008206 ORTHO05D010320 1.1e-08 63.2 80 46.2
Sed0002436 Sechium edule HOM05D008206 ORTHO05D010320 1.1e-08 63.2 80 46.2
TPR.G28906 Trifolium pratense HOM05D008206 ORTHO05D010320 1.9e-08 62.4 81 49.4
Medtr7g010980 Medicago truncatula HOM05D008206 ORTHO05D010320 1.7e-07 59.3 81 48.1
Gohir.A10G100200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 2.2e-07 58.9 80 46.2
Gohir.D11G074000 Gossypium hirsutum HOM05D008206 ORTHO05D010320 2.8e-07 58.5 80 46.2
Gorai.007G079400 Gossypium raimondii HOM05D008206 ORTHO05D010320 2.8e-07 58.5 80 46.2
Thecc.04G084200 Theobroma cacao HOM05D008206 ORTHO05D010320 2.8e-07 58.5 80 42.5
Actinidia17551 Actinidia chinensis HOM05D008206 ORTHO05D010320 3.7e-07 58.2 85 41.2
CDE02G3745 Ceratophyllum demersum HOM05D002107 ORTHO05D002067 3.7e-07 58.2 85 49.4
Gorai.011G097200 Gossypium raimondii HOM05D008206 ORTHO05D010320 6.3e-07 57.4 81 43.2
THA.LOC104822354 Tarenaya hassleriana HOM05D011054 ORTHO05D013197 6.3e-07 57.4 82 45.1
CSS0033569 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 8.2e-07 57.0 83 43.4
CSS0025041 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 1.4e-06 56.2 83 43.4
Ciclev10013233m.g Citrus clementina HOM05D008206 ORTHO05D010320 1.4e-06 56.2 83 43.4
Nn3g17269 Nelumbo nucifera HOM05D008206 ORTHO05D010320 1.4e-06 56.2 83 45.8
Gohir.D10G088300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 1.8e-06 55.8 80 42.5
Manes.01G092200 Manihot esculenta HOM05D008206 ORTHO05D010320 1.8e-06 55.8 81 44.4
Thecc.04G083900 Theobroma cacao HOM05D008206 ORTHO05D010320 1.8e-06 55.8 80 42.5
Dinv33772 Davidia involucrata HOM05D008206 ORTHO05D010320 3.1e-06 55.1 87 44.8
Aqoxy3G03425 Aquilegia oxysepala HOM05D008206 ORTHO05D010320 4.1e-06 54.7 83 42.2
CiPaw.04G016300 Carya illinoinensis HOM05D008206 ORTHO05D010320 9.1e-06 53.5 80 41.2


User provided reference genes

Program Settings