Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G013810 Citrullus lanatus HOM05D000001 ORTHO05D149884 6.0e-32 140.2 69 100.0
MELO3C030952.2 Cucumis melo HOM05D000001 ORTHO05D000003 1.7e-15 85.5 65 69.2
CsaV3_3G042840 Cucumis sativus L. HOM05D000001 ORTHO05D000003 1.7e-15 85.5 65 69.2
ClCG10G013840 Citrullus lanatus HOM05D000001 ORTHO05D000003 3.0e-15 84.7 65 69.2
Sed0005658 Sechium edule HOM05D000001 ORTHO05D000003 5.6e-14 80.5 65 64.6
Lju41C42T17 Lonicera japonica HOM05D000001 ORTHO05D000003 8.4e-10 66.6 57 61.4
TAR371G1241 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.9e-09 65.5 65 50.8
FvH4_6g51620 Fragaria vesca HOM05D000001 ORTHO05D000003 4.2e-09 64.3 65 52.3
FvH4_6g51580 Fragaria vesca HOM05D000001 ORTHO05D000003 5.4e-09 63.9 65 52.3
FAN05G1101 Fragaria x ananassa HOM05D000001 ORTHO05D000003 9.3e-09 63.2 65 50.8
FAN05G1139 Fragaria x ananassa HOM05D000001 ORTHO05D000003 9.3e-09 63.2 65 50.8
Dinv25731 Davidia involucrata HOM05D000001 ORTHO05D000003 1.2e-08 62.8 65 47.7
FAN02G3064 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.2e-08 62.8 65 49.2
Prupe.3G292700 Prunus persica HOM05D000001 ORTHO05D000003 1.6e-08 62.4 65 50.8
FAN09G2899 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.7e-08 61.6 64 51.6
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.7e-08 61.6 65 49.2
GSVIVG01032394001 Vitis vinifera HOM05D000001 ORTHO05D000003 2.7e-08 61.6 65 50.8
CSS0001265 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 3.5e-08 61.2 65 50.8
CSS0014888 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 3.5e-08 61.2 65 50.8
Lsat_1_v5_gn_2_91381 Lactuca sativa HOM05D000001 ORTHO05D000003 1.0e-07 59.7 57 56.1
HanXRQChr07g0198991 Helianthus annuus HOM05D000001 ORTHO05D000003 1.3e-07 59.3 64 50.0
Lalb_Chr12g0209711 Lupinus albus HOM05D000001 ORTHO05D000003 1.8e-07 58.9 65 47.7
CANSAT64G2512 Cannabis sativa HOM05D000001 ORTHO05D000003 3.0e-07 58.2 52 61.5
MD17G1026000 Malus domestica HOM05D000001 ORTHO05D000003 3.0e-07 58.2 65 47.7
Cpa.g.sc108.75 Carica papaya HOM05D000001 ORTHO05D000003 3.9e-07 57.8 52 59.6
Duzib147G0768 Durio zibethinus HOM05D000001 ORTHO05D000003 3.9e-07 57.8 65 47.7
MD17G1025100 Malus domestica HOM05D000001 ORTHO05D000003 3.9e-07 57.8 65 46.2
Glyma.05G079500 Glycine max HOM05D000001 ORTHO05D000003 6.7e-07 57.0 65 46.2
MBI17_g34338_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 6.7e-07 57.0 57 52.6
Oeu036540.1 Olea europaea HOM05D000001 ORTHO05D000003 6.7e-07 57.0 64 45.3
Lj3g0005619 Lotus japonicus HOM05D000001 ORTHO05D000003 8.7e-07 56.6 65 46.2
ATR0824G054 Amborella trichopoda HOM05D000001 ORTHO05D000003 1.1e-06 56.2 57 47.4
Cc07_g01600 Coffea canephora HOM05D000001 ORTHO05D000003 1.1e-06 56.2 57 49.1
arahy.Tifrunner.gnm1.ann1.WG5ADN Arachis hypogaea HOM05D000001 ORTHO05D000003 1.5e-06 55.8 65 47.7
Ca_02098_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 1.5e-06 55.8 65 46.2
Gohir.A09G022400 Gossypium hirsutum HOM05D000001 ORTHO05D000003 1.5e-06 55.8 65 46.2
Hma1.2p1_1995F.1_g310370 Hydrangea macrophylla HOM05D000001 ORTHO05D000003 1.5e-06 55.8 65 41.5
Gohir.D09G021600 Gossypium hirsutum HOM05D000001 ORTHO05D000003 2.5e-06 55.1 65 46.2
Gorai.006G025600 Gossypium raimondii HOM05D000001 ORTHO05D000003 2.5e-06 55.1 65 46.2
Medtr4g015760 Medicago truncatula HOM05D000001 ORTHO05D000003 2.5e-06 55.1 65 44.6
COL.COLO4_25161 Corchorus olitorius HOM05D000001 ORTHO05D000003 3.3e-06 54.7 65 44.6
DCAR_029940 Daucus carota HOM05D000001 ORTHO05D000003 3.3e-06 54.7 61 45.9
QL02p074192 Quercus lobata HOM05D000001 ORTHO05D048658 3.3e-06 54.7 52 53.8
CAN.G473.15 Capsicum annuum HOM05D000001 ORTHO05D000003 4.3e-06 54.3 57 47.4
CiPaw.03G044800 Carya illinoinensis HOM05D000001 ORTHO05D000003 4.3e-06 54.3 65 46.2
PGSC0003DMG400043933 Solanum tuberosum HOM05D000001 ORTHO05D000003 4.3e-06 54.3 64 45.3
MD17G1025200 Malus domestica HOM05D000001 ORTHO05D048658 5.6e-06 53.9 52 53.8
Medtr8g031210 Medicago truncatula HOM05D000001 ORTHO05D000003 7.4e-06 53.5 65 43.1
Migut.K01402 Erythranthe guttata HOM05D000001 ORTHO05D000003 9.6e-06 53.1 62 41.9
Glyma.05G078900 Glycine max HOM05D000001 ORTHO05D000003 9.6e-06 53.1 65 44.6
Solyc02g093380.1 Solanum lycopersicum HOM05D000001 ORTHO05D000003 9.6e-06 53.1 64 43.8
TPR.G13328 Trifolium pratense HOM05D000001 ORTHO05D000003 9.6e-06 53.1 65 43.1
VMungo0720G1125 Vigna mungo HOM05D000001 ORTHO05D000003 9.6e-06 53.1 65 44.6


User provided reference genes

Program Settings