Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.3e-115 419.9 224 100.0
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 3.5e-57 225.7 132 87.9
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 4.3e-55 218.8 132 86.4
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.1e-53 214.2 132 84.8
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 4.8e-38 162.2 129 66.7
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 8.4e-35 151.4 131 62.6
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.6e-33 147.1 130 63.1
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 3.5e-33 146.0 130 62.3
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.0e-32 144.4 133 60.9
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.3e-32 144.1 122 64.8
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 2.3e-32 143.3 122 62.3
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.3e-32 143.3 131 61.8
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.3e-32 143.3 131 61.8
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 2.3e-32 143.3 123 63.4
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 6.7e-32 141.7 132 60.6
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 8.7e-32 141.4 132 57.6
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.5e-31 140.6 124 62.9
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.9e-31 140.2 146 56.8
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 2.5e-31 139.8 125 62.4
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.3e-31 139.4 135 57.8
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 3.3e-31 139.4 132 58.3
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 4.3e-31 139.0 125 61.6
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 4.3e-31 139.0 132 59.1
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 5.6e-31 138.7 125 61.6
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 7.4e-31 138.3 113 62.8
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 1.3e-30 137.5 132 59.1
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.3e-30 137.5 104 68.3
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 4.8e-30 135.6 124 61.3
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 6.2e-30 135.2 132 57.6
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 6.2e-30 135.2 132 57.6
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 6.2e-30 135.2 137 56.9
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 6.2e-30 135.2 133 60.9
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.4e-29 134.0 124 58.1
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.4e-29 134.0 131 58.0
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.4e-29 134.0 125 57.6
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.8e-29 133.7 141 54.6
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.4e-29 133.3 132 56.8
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.4e-29 133.3 132 56.8
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 5.3e-29 132.1 113 61.9
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 5.3e-29 132.1 127 57.5
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 6.9e-29 131.7 127 57.5
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.2e-28 131.0 131 58.8
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.0e-28 130.2 137 54.7
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 2.0e-28 130.2 123 59.3
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 2.6e-28 129.8 128 59.4
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.6e-28 129.8 128 59.4
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 4.5e-28 129.0 129 54.3
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 4.5e-28 129.0 131 55.0
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 4.5e-28 129.0 127 56.7
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 5.8e-28 128.6 129 53.5
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.3e-27 127.5 125 57.6
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 1.3e-27 127.5 127 59.1
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.3e-27 127.5 98 67.3
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-27 127.1 118 57.6
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.7e-27 127.1 119 58.8
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 2.9e-27 126.3 129 55.8
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 3.8e-27 125.9 128 53.9
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 3.8e-27 125.9 128 53.9
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 3.8e-27 125.9 128 53.9
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 3.8e-27 125.9 128 53.9
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 3.8e-27 125.9 128 53.9
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 3.8e-27 125.9 130 50.8
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 4.9e-27 125.6 118 61.9
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 4.9e-27 125.6 129 55.8
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 6.5e-27 125.2 129 51.9
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 6.5e-27 125.2 127 57.5
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 8.4e-27 124.8 93 67.7
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 8.4e-27 124.8 129 53.5
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.4e-26 124.0 129 54.3
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.9e-26 123.6 129 52.7
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.9e-26 123.6 117 59.8
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.9e-26 123.6 123 58.5
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 2.5e-26 123.2 130 53.1
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.2e-26 122.5 129 55.0
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 4.2e-26 122.5 123 56.9
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 5.5e-26 122.1 128 54.7
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.6e-25 120.6 137 51.8
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.6e-25 120.6 129 55.8
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.1e-25 120.2 127 51.2
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 2.1e-25 120.2 128 55.5
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.1e-25 120.2 130 52.3
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 2.7e-25 119.8 110 58.2
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 3.5e-25 119.4 129 52.7
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 4.6e-25 119.0 121 57.0
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 6.0e-25 118.6 109 56.0
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 6.0e-25 118.6 109 56.0
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 7.9e-25 118.2 130 52.3
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.3e-24 117.5 107 58.9
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 3.0e-24 116.3 120 57.5
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 5.1e-24 115.5 131 51.1
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 5.1e-24 115.5 128 50.8
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.1e-23 114.4 133 48.1
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 1.9e-23 113.6 139 46.0
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 3.3e-23 112.8 129 49.6
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 3.3e-23 112.8 125 48.0
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 4.3e-23 112.5 127 49.6
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 4.3e-23 112.5 130 50.8
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 4.3e-23 112.5 128 51.6
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 5.7e-23 112.1 134 47.0
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 7.4e-23 111.7 113 54.0
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 9.6e-23 111.3 129 47.3
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.3e-22 110.9 137 48.2
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 4.8e-22 109.0 137 48.2
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 4.8e-22 109.0 126 49.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 4.8e-22 109.0 124 50.8
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.4e-21 107.5 112 51.8
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 5.3e-21 105.5 132 42.4
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 2.0e-20 103.6 88 62.5
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 5.9e-20 102.1 97 53.6
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 7.6e-20 101.7 127 45.7
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.3e-19 100.9 98 54.1
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 2.5e-18 96.7 113 51.3
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.6e-17 94.0 70 67.1
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 4.6e-17 92.4 157 39.5
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 5.1e-16 89.0 110 46.4
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 5.7e-15 85.5 64 67.2
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.8e-14 83.2 64 68.8
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.4e-13 80.9 78 47.4
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 3.1e-13 79.7 85 56.5
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 4.1e-13 79.3 85 47.1
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 5.3e-13 79.0 104 37.5
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 9.0e-13 78.2 88 54.5
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.4e-10 70.9 82 41.5
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 2.7e-09 66.6 121 36.4
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 4.4e-07 59.3 122 30.3


User provided reference genes

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