Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 2.6e-141 505.4 258 100.0
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 1.4e-129 466.5 262 92.4
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 1.2e-128 463.4 262 91.2
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 7.7e-125 450.7 262 89.3
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 8.1e-98 360.9 249 75.5
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 1.2e-96 357.1 237 77.2
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 1.1e-94 350.5 253 72.7
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 1.1e-94 350.5 256 72.7
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 1.4e-94 350.1 259 68.7
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 1.4e-94 350.1 236 75.8
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 2.4e-94 349.4 235 76.2
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 1.6e-93 346.7 262 71.4
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 2.1e-93 346.3 256 71.9
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 2.7e-93 345.9 267 68.2
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 7.8e-93 344.4 258 72.1
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 3.0e-92 342.4 266 67.7
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 3.9e-92 342.0 243 72.4
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 3.9e-92 342.0 245 71.4
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 5.1e-92 341.7 256 69.9
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 5.1e-92 341.7 249 71.5
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 2.5e-91 339.3 233 76.0
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 5.6e-91 338.2 261 69.0
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 3.6e-90 335.5 239 72.0
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 8.1e-90 334.3 252 70.6
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 1.8e-89 333.2 245 72.2
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.8e-89 333.2 259 66.8
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 2.3e-89 332.8 261 67.0
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 8.9e-89 330.9 257 66.1
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 8.9e-89 330.9 257 70.8
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.5e-88 330.1 258 66.7
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 2.6e-88 329.3 256 71.5
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 4.4e-88 328.6 259 66.4
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 9.9e-88 327.4 230 72.2
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 1.7e-87 326.6 257 65.0
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 2.9e-87 325.9 245 66.9
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 4.9e-87 325.1 230 71.7
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 4.9e-87 325.1 237 71.7
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 6.4e-87 324.7 237 71.7
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 8.4e-87 324.3 243 68.7
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 1.4e-86 323.6 237 71.3
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 1.9e-86 323.2 255 69.0
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 2.4e-86 322.8 241 67.6
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 3.2e-86 322.4 259 67.2
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 7.1e-86 321.2 243 68.7
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 1.2e-85 320.5 250 66.8
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 1.2e-85 320.5 255 65.5
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 2.1e-85 319.7 255 66.3
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 2.7e-85 319.3 226 72.1
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 2.7e-85 319.3 226 72.1
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 3.5e-85 318.9 249 68.3
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 3.5e-85 318.9 254 66.5
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 3.5e-85 318.9 246 70.3
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 6.0e-85 318.2 251 64.9
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 6.0e-85 318.2 226 73.0
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 1.0e-84 317.4 226 73.5
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 1.0e-84 317.4 256 67.6
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 1.3e-84 317.0 246 68.3
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 3.0e-84 315.8 249 65.9
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 6.6e-84 314.7 241 66.4
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 1.9e-83 313.2 225 70.7
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 7.3e-83 311.2 243 65.4
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 1.6e-82 310.1 242 64.0
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 2.1e-82 309.7 236 64.8
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 2.8e-82 309.3 259 65.3
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 3.6e-82 308.9 248 62.9
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 3.6e-82 308.9 234 68.4
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 3.6e-82 308.9 245 67.3
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 4.7e-82 308.5 235 70.6
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 8.1e-82 307.8 236 65.3
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 8.1e-82 307.8 227 67.4
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 1.1e-81 307.4 234 66.7
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 1.4e-81 307.0 248 62.5
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 1.8e-81 306.6 248 62.1
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 1.8e-81 306.6 248 62.1
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 2.4e-81 306.2 209 71.3
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 4.0e-81 305.4 223 73.1
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 5.2e-81 305.1 234 66.7
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 5.2e-81 305.1 245 66.5
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 4.4e-80 302.0 202 76.2
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 9.9e-80 300.8 236 68.2
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 2.2e-79 299.7 247 64.0
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 2.2e-79 299.7 250 64.0
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 6.4e-79 298.1 234 65.0
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 1.4e-78 297.0 254 63.0
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 2.4e-78 296.2 395 45.8
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 3.2e-78 295.8 238 68.1
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 4.2e-78 295.4 261 60.5
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 7.1e-78 294.7 254 60.6
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 3.5e-77 292.4 256 61.7
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 3.5e-77 292.4 256 61.7
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 6.0e-77 291.6 236 63.1
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 2.3e-76 289.7 231 64.5
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 1.1e-75 287.3 233 63.5
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 3.6e-74 282.3 256 61.3
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 1.1e-73 280.8 237 63.3
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 5.1e-68 261.9 246 60.2
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 3.5e-61 239.2 197 62.9
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 1.9e-59 233.4 203 63.1
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 4.3e-59 232.3 204 55.4
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 1.4e-57 227.3 199 59.3
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 2.0e-56 223.4 253 49.4
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 4.5e-56 222.2 218 53.7
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 2.6e-48 196.4 151 71.5
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 5.1e-44 182.2 265 41.1
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 1.5e-43 180.6 139 64.7
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 3.3e-35 152.9 98 78.6
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 1.8e-33 147.1 101 72.3
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 2.3e-28 130.2 130 54.6
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 2.7e-21 106.7 78 74.4
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 1.2e-16 91.3 244 34.8
Cre01.g043050 Chlamydomonas reinhardtii HOM05D005243 ORTHO05D006670 1.7e-07 60.8 182 26.9
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 2.5e-06 57.0 145 26.2


User provided reference genes

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