Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 2.6e-211 738.4 357 100.0
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 2.0e-184 649.0 353 89.0
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 5.8e-179 630.9 357 86.0
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 2.1e-168 595.9 356 81.7
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.3e-130 470.3 359 63.2
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 1.3e-127 460.3 353 63.2
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 4.3e-126 455.3 353 62.9
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 5.7e-126 454.9 353 63.2
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 9.7e-126 454.1 353 63.5
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.4e-124 450.3 353 62.0
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 5.9e-123 444.9 356 60.4
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.0e-122 444.1 357 59.9
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 1.3e-122 443.7 358 61.2
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 2.9e-122 442.6 353 61.5
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.0e-122 441.8 354 61.3
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 6.5e-122 441.4 356 61.2
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 4.2e-121 438.7 362 59.4
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 7.2e-121 438.0 353 58.4
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 9.4e-121 437.6 355 59.7
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 1.0e-119 434.1 353 57.5
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 1.4e-119 433.7 353 60.1
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.4e-119 433.7 341 61.9
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.4e-119 433.7 341 61.9
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 5.1e-119 431.8 353 57.8
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 6.7e-119 431.4 354 59.6
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 2.0e-118 429.9 354 59.6
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 3.3e-118 429.1 372 58.6
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 3.7e-117 425.6 351 59.8
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 4.8e-117 425.2 336 60.4
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 4.8e-117 425.2 329 62.3
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.1e-116 424.1 360 58.1
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 1.4e-116 423.7 354 59.9
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.4e-116 423.7 360 57.8
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 2.4e-116 422.9 335 59.1
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 3.1e-116 422.5 354 58.2
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 4.1e-116 422.2 353 57.5
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 5.3e-116 421.8 355 58.3
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 6.9e-116 421.4 354 57.6
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 2.0e-115 419.9 354 57.3
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 2.6e-115 419.5 360 57.5
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.3e-114 417.2 357 57.4
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 2.2e-114 416.4 353 58.1
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.9e-113 413.3 354 57.6
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 2.5e-113 412.9 335 59.1
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 2.5e-113 412.9 351 57.3
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 3.2e-113 412.5 355 58.0
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.2e-113 412.1 355 57.2
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.2e-113 412.1 356 56.7
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 5.5e-113 411.8 357 58.5
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 2.1e-112 409.8 352 56.8
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 2.7e-112 409.5 357 58.0
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 4.7e-112 408.7 361 56.2
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 6.1e-112 408.3 355 57.2
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 3.9e-111 405.6 355 57.5
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.0e-110 403.3 372 55.6
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.7e-110 401.7 355 58.3
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.3e-109 400.6 359 54.3
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 2.2e-109 399.8 351 57.3
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 7.0e-108 394.8 353 55.2
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 9.1e-108 394.4 355 55.2
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 1.3e-106 390.6 358 54.7
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 1.1e-105 387.5 352 58.2
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 1.9e-105 386.7 333 58.3
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 5.5e-105 385.2 320 59.7
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 7.2e-105 384.8 358 51.4
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 1.2e-104 384.0 344 55.8
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.1e-104 383.3 358 53.4
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 2.1e-104 383.3 358 52.8
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 2.7e-104 382.9 337 57.0
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.4e-103 380.6 347 56.2
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 4.0e-103 379.0 284 66.5
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 5.2e-103 378.6 360 51.9
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 5.2e-103 378.6 360 51.9
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 2.0e-102 376.7 353 51.8
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 2.0e-102 376.7 358 52.8
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.6e-102 376.3 351 53.8
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 3.3e-102 375.9 353 54.1
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 3.7e-101 372.5 358 51.4
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.4e-100 369.8 389 49.4
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 2.4e-100 369.8 360 49.7
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 4.5e-99 365.5 384 48.7
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 2.9e-98 362.8 346 54.3
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 5.0e-98 362.1 375 48.0
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.7e-96 356.3 351 52.4
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 8.8e-95 351.3 343 52.2
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 3.5e-91 339.3 338 51.5
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 1.7e-90 337.0 280 59.6
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 2.1e-88 330.1 263 61.6
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 2.8e-88 329.7 354 49.2
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 4.7e-88 328.9 356 50.6
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 1.0e-87 327.8 260 61.9
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 3.0e-87 326.2 351 50.4
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.4e-84 315.5 261 60.9
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 8.6e-82 308.1 320 51.6
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 4.0e-79 299.3 351 46.7
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.7e-75 286.6 258 55.0
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 1.5e-73 280.8 314 49.7
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 2.5e-73 280.0 263 53.6
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.2e-72 277.7 360 42.5
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 3.1e-71 273.1 269 51.3
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 5.0e-66 255.8 246 51.6
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 4.3e-65 252.7 223 56.1
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 7.3e-65 251.9 201 62.2
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 2.3e-63 246.9 361 40.2
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.9e-60 237.3 189 56.1
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 7.1e-60 235.3 251 49.4
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 4.6e-59 232.6 320 44.7
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 2.3e-42 177.2 130 59.2
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 3.1e-39 166.8 125 60.8
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 1.3e-34 151.4 288 36.5
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 9.6e-33 145.2 100 69.0
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 2.2e-29 134.0 219 35.6
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 3.1e-23 113.6 154 40.9
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 2.5e-17 94.0 70 58.6
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 6.9e-15 85.9 64 65.6
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 1.1e-07 62.0 83 44.6


User provided reference genes

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