Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G012450 Citrullus lanatus HOM05D005524 ORTHO05D005392 1.7e-22 108.6 62 100.0
CsaV3_3G032220 Cucumis sativus L. HOM05D005524 ORTHO05D005392 3.2e-16 87.8 60 85.0
Sed0007200 Sechium edule HOM05D005524 ORTHO05D005392 6.6e-14 80.1 64 71.9
CARHR167870 Cardamine hirsuta HOM05D005524 ORTHO05D005392 9.5e-13 76.3 62 67.7
Sed0016248 Sechium edule HOM05D005524 ORTHO05D005392 9.5e-13 76.3 64 70.3
BcaC07g40352 Brassica carinata HOM05D005524 ORTHO05D005392 1.2e-12 75.9 62 67.7
C08p33270 Brassica napus HOM05D005524 ORTHO05D005392 1.2e-12 75.9 62 67.7
BolC8t50929H Brassica oleracea HOM05D005524 ORTHO05D005392 1.2e-12 75.9 62 67.7
BcaB02g07583 Brassica carinata HOM05D005524 ORTHO05D005392 1.6e-12 75.5 62 67.7
AT3G57690 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 2.1e-12 75.1 62 66.1
BcaC08g44863 Brassica carinata HOM05D005524 ORTHO05D005392 2.1e-12 75.1 62 67.7
BolC6t37629H Brassica oleracea HOM05D005524 ORTHO05D005392 2.1e-12 75.1 62 67.7
BcaB02g08300 Brassica carinata HOM05D005524 ORTHO05D005392 2.8e-12 74.7 62 66.1
BcaB02g08302 Brassica carinata HOM05D005524 ORTHO05D005392 2.8e-12 74.7 62 66.1
A09p50540 Brassica napus HOM05D005524 ORTHO05D005392 2.8e-12 74.7 62 64.5
Haze_03228 Corylus avellana HOM05D000430 ORTHO05D000305 2.8e-12 74.7 67 67.2
Potri.001G268800 Populus trichocarpa HOM05D005524 ORTHO05D005392 2.8e-12 74.7 62 71.0
Potri.009G063600 Populus trichocarpa HOM05D005524 ORTHO05D005392 2.8e-12 74.7 62 71.0
BcaC02g09954 Brassica carinata HOM05D005524 ORTHO05D005392 3.6e-12 74.3 62 66.1
A04p02980 Brassica napus HOM05D005524 ORTHO05D005392 3.6e-12 74.3 62 66.1
C04p34740 Brassica napus HOM05D005524 ORTHO05D005392 3.6e-12 74.3 62 66.1
BolC4t25028H Brassica oleracea HOM05D005524 ORTHO05D005392 3.6e-12 74.3 62 66.1
BraA04t16021Z Brassica rapa HOM05D005524 ORTHO05D005392 3.6e-12 74.3 62 66.1
BraA09t40508Z Brassica rapa HOM05D005524 ORTHO05D005392 3.6e-12 74.3 62 62.9
A07p23640 Brassica napus HOM05D005524 ORTHO05D005392 6.2e-12 73.6 62 66.1
C06p24770 Brassica napus HOM05D005524 ORTHO05D005392 6.2e-12 73.6 62 66.1
BraA07t30018Z Brassica rapa HOM05D005524 ORTHO05D005392 6.2e-12 73.6 62 66.1
AL5G39310 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 8.1e-12 73.2 63 68.3
Aa31LG10G12450 Aethionema arabicum HOM05D005524 ORTHO05D005392 1.1e-11 72.8 62 67.7
ClCG09G004270 Citrullus lanatus HOM05D005524 ORTHO05D005392 1.4e-11 72.4 64 65.6
Potri.006G056200 Populus trichocarpa HOM05D005524 ORTHO05D005392 1.4e-11 72.4 62 66.1
Sp5g04940 Schrenkiella parvula HOM05D005524 ORTHO05D005392 1.4e-11 72.4 63 68.3
BcaC07g40149 Brassica carinata HOM05D005524 ORTHO05D005392 1.8e-11 72.0 62 66.1
Sabra16G0164700 Salix brachista HOM05D005524 ORTHO05D005392 1.8e-11 72.0 62 71.0
Eucgr.H02490 Eucalyptus grandis HOM05D005524 ORTHO05D005392 2.3e-11 71.6 62 69.4
Sed0003541 Sechium edule HOM05D005524 ORTHO05D005392 3.1e-11 71.2 64 65.6
Dinv18091 Davidia involucrata HOM05D005524 ORTHO05D005392 4.0e-11 70.9 62 64.5
Sed0023384 Sechium edule HOM05D005524 ORTHO05D005392 4.0e-11 70.9 54 79.6
Potri.016G052001 Populus trichocarpa HOM05D005524 ORTHO05D005392 6.8e-11 70.1 62 64.5
SHI24452 Sapria himalayana HOM05D005524 ORTHO05D005392 6.8e-11 70.1 60 65.0
TWI73G1008 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 6.8e-11 70.1 62 66.1
Sed0014034 Sechium edule HOM05D005524 ORTHO05D005392 2.6e-10 68.2 64 62.5
BcaB06g29217 Brassica carinata HOM05D005524 ORTHO05D005392 5.8e-10 67.0 63 66.7
CiPaw.13G003600 Carya illinoinensis HOM05D005524 ORTHO05D005392 5.8e-10 67.0 65 61.5
Thecc.01G412500 Theobroma cacao HOM05D005524 ORTHO05D005392 5.8e-10 67.0 62 61.3
TWI09G0988 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 5.8e-10 67.0 62 64.5
BcaNung07196 Brassica carinata HOM05D005524 ORTHO05D005392 7.5e-10 66.6 63 66.7
AL4G40250 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 9.8e-10 66.2 63 65.1
CARHR137000 Cardamine hirsuta HOM05D005524 ORTHO05D005392 1.3e-09 65.9 63 63.5
Duzib093G2098 Durio zibethinus HOM05D005524 ORTHO05D005392 1.3e-09 65.9 63 63.5
Eucgr.A02403 Eucalyptus grandis HOM05D005524 ORTHO05D005392 1.3e-09 65.9 62 61.3
Duzib106G1083 Durio zibethinus HOM05D005524 ORTHO05D005392 1.7e-09 65.5 63 63.5
AT2G41905 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 2.2e-09 65.1 63 65.1
BcaC02g07275 Brassica carinata HOM05D005524 ORTHO05D005392 2.2e-09 65.1 63 65.1
A04p31910 Brassica napus HOM05D005524 ORTHO05D005392 2.2e-09 65.1 63 65.1
C04p69380 Brassica napus HOM05D005524 ORTHO05D005392 2.2e-09 65.1 63 65.1
BolC4t28440H Brassica oleracea HOM05D005524 ORTHO05D005392 2.2e-09 65.1 63 65.1
BraA04t18649Z Brassica rapa HOM05D005524 ORTHO05D005392 2.2e-09 65.1 63 65.1
Sp4g24180 Schrenkiella parvula HOM05D005524 ORTHO05D005392 2.9e-09 64.7 63 65.1
A03p23470 Brassica napus HOM05D005524 ORTHO05D005392 4.9e-09 63.9 63 63.5
BraA03t11563Z Brassica rapa HOM05D005524 ORTHO05D005392 4.9e-09 63.9 63 63.5
Atru.chr1.974 Acer truncatum HOM05D005524 ORTHO05D005392 6.4e-09 63.5 67 61.2
Lalb_Chr01g0015271 Lupinus albus HOM05D005524 ORTHO05D005392 6.4e-09 63.5 60 66.7
Lalb_Chr12g0205751 Lupinus albus HOM05D005524 ORTHO05D005392 6.4e-09 63.5 64 62.5
BcaB01g03426 Brassica carinata HOM05D005524 ORTHO05D005392 8.3e-09 63.2 63 61.9
Carub.0004s2422 Capsella rubella HOM05D005524 ORTHO05D005392 8.3e-09 63.2 63 63.5
Duzib128G1940 Durio zibethinus HOM05D005524 ORTHO05D005392 1.1e-08 62.8 65 60.0
Lalb_Chr19g0132101 Lupinus albus HOM05D005524 ORTHO05D005392 1.1e-08 62.8 60 65.0
Manes.07G004601 Manihot esculenta HOM05D005524 ORTHO05D005392 1.4e-08 62.4 63 60.3
Atru.chr1.1006 Acer truncatum HOM05D005524 ORTHO05D005392 1.9e-08 62.0 67 59.7
BcaC01g05321 Brassica carinata HOM05D005524 ORTHO05D005392 1.9e-08 62.0 63 61.9
C03p27990 Brassica napus HOM05D005524 ORTHO05D005392 1.9e-08 62.0 63 61.9
BolC3t15170H Brassica oleracea HOM05D005524 ORTHO05D005392 1.9e-08 62.0 63 61.9
Lalb_Chr03g0033981 Lupinus albus HOM05D005524 ORTHO05D005392 2.4e-08 61.6 60 66.7
CSS0036301 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 5.4e-08 60.5 62 58.1
MBI04_g13621_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.4e-08 60.5 64 56.2
MELO3C009064.2 Cucumis melo HOM05D019173 ORTHO05D005392 7.1e-08 60.1 63 57.1
PSO384G3061 Papaver somniferum HOM05D005524 ORTHO05D005392 7.1e-08 60.1 63 54.0
Phvul.001G137100 Phaseolus vulgaris HOM05D005524 ORTHO05D005392 7.1e-08 60.1 59 59.3
Thecc.05G164300 Theobroma cacao HOM05D005524 ORTHO05D005392 7.1e-08 60.1 64 62.5
CSS0030443 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 1.6e-07 58.9 62 56.5
CSS0022323 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 2.1e-07 58.5 62 59.7
Cfa010747 Carpinus fangiana HOM05D000430 ORTHO05D000305 2.1e-07 58.5 58 63.8
MBI01_g27620_MAGBIO Magnolia biondii HOM05D005524 ORTHO05D005392 2.1e-07 58.5 64 57.8
Sed0021947 Sechium edule HOM05D005524 ORTHO05D005392 2.1e-07 58.5 51 68.6
CSS0022867 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 2.7e-07 58.2 62 58.1
Lalb_Chr01g0008091 Lupinus albus HOM05D005524 ORTHO05D005392 2.7e-07 58.2 60 58.3
Prupe.2G010700 Prunus persica HOM05D005524 ORTHO05D005392 2.7e-07 58.2 70 52.9
CSS0011241 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 3.5e-07 57.8 62 58.1
CSS0036543 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 4.6e-07 57.4 62 59.7
Sed0003950 Sechium edule HOM05D005524 ORTHO05D005392 4.6e-07 57.4 64 54.7
DCAR_029662 Daucus carota HOM05D005524 ORTHO05D005392 6.0e-07 57.0 67 56.7
Carub.0005s2453 Capsella rubella HOM05D005524 ORTHO05D005392 7.8e-07 56.6 63 58.7
CANSAT80G2246 Cannabis sativa HOM05D005524 ORTHO05D005392 2.3e-06 55.1 64 57.8
Hma1.2p1_0621F.1_g190610 Hydrangea macrophylla HOM05D005524 ORTHO05D005392 2.3e-06 55.1 62 56.5
Lalb_Chr01g0008081 Lupinus albus HOM05D005524 ORTHO05D005392 2.3e-06 55.1 60 60.0
Cc02_g27760 Coffea canephora HOM05D005524 ORTHO05D005392 3.9e-06 54.3 62 51.6
Gorai.007G358400 Gossypium raimondii HOM05D008862 ORTHO05D005392 3.9e-06 54.3 67 52.2
MBI04_g13622_MAGBIO Magnolia biondii HOM05D005524 ORTHO05D005392 5.1e-06 53.9 61 54.1
Hma1.2p1_0293F.1_g116270 Hydrangea macrophylla HOM05D005524 ORTHO05D005392 6.6e-06 53.5 64 56.2
Sed0018871 Sechium edule HOM05D019173 ORTHO05D005392 8.6e-06 53.1 63 50.8


User provided reference genes

Program Settings