Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G012410 Citrullus lanatus HOM05D003972 ORTHO05D004609 1.2e-144 516.5 269 100.0
Sed0003633 Sechium edule HOM05D003972 ORTHO05D004609 1.1e-94 350.5 266 75.2
Thecc.01G411300 Theobroma cacao HOM05D003972 ORTHO05D004609 2.7e-80 302.8 273 63.0
Gohir.D12G096966 Gossypium hirsutum HOM05D003972 ORTHO05D004609 1.8e-79 300.1 274 63.1
Gohir.A12G094100 Gossypium hirsutum HOM05D003972 ORTHO05D004609 3.0e-79 299.3 274 62.8
Gorai.008G105300 Gossypium raimondii HOM05D003972 ORTHO05D004609 5.1e-79 298.5 274 63.1
Haze_03211 Corylus avellana HOM05D000015 ORTHO05D004609 6.7e-79 298.1 295 60.7
Nn2g15387 Nelumbo nucifera HOM05D003972 ORTHO05D004609 2.5e-78 296.2 271 62.7
Hund16627 Selenicereus undatus HOM05D003972 ORTHO05D004609 5.7e-78 295.0 268 62.7
ClCG09G004190 Citrullus lanatus HOM05D003972 ORTHO05D004609 7.4e-78 294.7 277 61.0
CiPaw.13G004600 Carya illinoinensis HOM05D003972 ORTHO05D004609 9.6e-78 294.3 271 62.0
Duzib138G0053 Durio zibethinus HOM05D003972 ORTHO05D004609 2.1e-77 293.1 276 61.2
CSS0031611 Camellia sinensis var. sinensis HOM05D003972 ORTHO05D004609 1.4e-76 290.4 279 59.5
Prupe.2G012700 Prunus persica HOM05D003972 ORTHO05D004609 1.8e-76 290.0 282 58.5
Sc11g0009210 Simmondsia chinensis HOM05D003972 ORTHO05D004609 1.8e-76 290.0 221 70.6
MD02G1312800 Malus domestica HOM05D003972 ORTHO05D004609 2.4e-76 289.7 283 59.0
MD07G1010400 Malus domestica HOM05D003972 ORTHO05D004609 4.1e-76 288.9 283 58.7
TAR633G1993 Trochodendron aralioides HOM05D003972 ORTHO05D004609 4.1e-76 288.9 278 59.7
Atru.chr11.2659 Acer truncatum HOM05D003972 ORTHO05D004609 5.3e-76 288.5 265 60.4
Nn7g36192 Nelumbo nucifera HOM05D003972 ORTHO05D004609 5.3e-76 288.5 274 59.9
Duzib268G1708 Durio zibethinus HOM05D003972 ORTHO05D004609 1.5e-75 287.0 282 58.2
TAR633G2347 Trochodendron aralioides HOM05D003972 ORTHO05D004609 1.5e-75 287.0 278 59.4
Sed0017110 Sechium edule HOM05D003972 ORTHO05D004609 3.4e-75 285.8 277 57.8
Lsat_1_v5_gn_1_107421 Lactuca sativa HOM05D003972 ORTHO05D004609 1.0e-74 284.3 275 58.5
Ciclev10032620m.g Citrus clementina HOM05D003972 ORTHO05D004609 1.3e-74 283.9 264 60.6
TWI73G1179 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 2.2e-74 283.1 281 58.4
RcHm_v2.0_Chr1g0315911 Rosa chinensis HOM05D003972 ORTHO05D004609 5.0e-74 282.0 279 59.1
CsaV3_7G031080 Cucumis sativus L. HOM05D003972 ORTHO05D004609 1.9e-73 280.0 277 56.7
HanXRQChr01g0016231 Helianthus annuus HOM05D003972 ORTHO05D004609 1.9e-73 280.0 275 56.4
EL10Ac3g05626 Beta vulgaris HOM05D003972 ORTHO05D004609 3.2e-73 279.3 268 59.0
MELO3C023548.2 Cucumis melo HOM05D003972 ORTHO05D004609 3.2e-73 279.3 277 56.0
TWI09G1021 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 4.2e-73 278.9 281 56.9
HanXRQChr16g0524521 Helianthus annuus HOM05D003972 ORTHO05D004609 5.5e-73 278.5 273 58.2
Manes.10G143400 Manihot esculenta HOM05D003972 ORTHO05D004609 5.5e-73 278.5 276 58.0
Hund14179 Selenicereus undatus HOM05D003972 ORTHO05D004609 5.5e-73 278.5 279 58.8
Sopen01g034180 Solanum pennellii HOM05D003972 ORTHO05D004609 5.5e-73 278.5 265 58.5
Rhsim07G0055300 Rhododendron simsii HOM05D003972 ORTHO05D004609 7.2e-73 278.1 272 57.7
Aqoxy2G00123 Aquilegia oxysepala HOM05D003972 ORTHO05D004609 1.6e-72 276.9 281 57.3
HanXRQChr17g0562951 Helianthus annuus HOM05D003972 ORTHO05D004609 2.7e-72 276.2 276 57.6
QL04p006659 Quercus lobata HOM05D003972 ORTHO05D004609 2.7e-72 276.2 217 69.1
Solyc01g087120.3 Solanum lycopersicum HOM05D003972 ORTHO05D004609 2.7e-72 276.2 265 58.1
vmacro13664 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 3.6e-72 275.8 279 56.3
PGSC0003DMG400006869 Solanum tuberosum HOM05D003972 ORTHO05D004609 4.6e-72 275.4 265 58.1
Actinidia20668 Actinidia chinensis HOM05D003972 ORTHO05D004609 7.9e-72 274.6 275 58.2
Nitab4.5_0000634g0150 Nicotiana tabacum HOM05D003972 ORTHO05D004609 7.9e-72 274.6 265 57.7
Peaxi162Scf00428g00211 Petunia axillaris HOM05D003972 ORTHO05D004609 1.0e-71 274.2 263 58.2
AUR62009382 Chenopodium quinoa HOM05D003972 ORTHO05D004609 1.3e-71 273.9 268 56.7
COL.COLO4_23932 Corchorus olitorius HOM05D003972 ORTHO05D004609 1.3e-71 273.9 300 54.3
FAN01G2341 Fragaria x ananassa HOM05D003972 ORTHO05D004609 2.3e-71 273.1 280 56.4
MSTRG.28071 Avicennia marina HOM05D003972 ORTHO05D004609 3.0e-71 272.7 275 57.8
FAN06G4274 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.0e-71 272.7 275 57.1
FAN10G2592 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.0e-71 272.7 275 57.1
MSTRG.5022 Avicennia marina HOM05D003972 ORTHO05D004609 6.7e-71 271.6 280 56.4
CANSAT80G0274 Cannabis sativa HOM05D003972 ORTHO05D004609 6.7e-71 271.6 279 58.1
Oeu006575.2 Olea europaea HOM05D003972 ORTHO05D004609 6.7e-71 271.6 266 58.6
CAN.G1560.6 Capsicum annuum HOM05D003972 ORTHO05D004609 8.7e-71 271.2 269 56.1
FvH4_7g01010 Fragaria vesca HOM05D003972 ORTHO05D004609 8.7e-71 271.2 275 56.7
ECA248G3800 Erigeron canadensis HOM05D003972 ORTHO05D004609 1.5e-70 270.4 267 58.4
FAN03G0639 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.5e-70 270.4 280 56.1
Oeu014581.1 Olea europaea HOM05D003972 ORTHO05D004609 1.5e-70 270.4 277 56.7
PGR044G2681 Punica granatum HOM05D003972 ORTHO05D004609 1.9e-70 270.0 274 55.5
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 2.5e-70 269.6 215 66.5
PSO384G2850 Papaver somniferum HOM05D003972 ORTHO05D004609 2.5e-70 269.6 267 56.9
Lj7A570T56 Lonicera japonica HOM05D003972 ORTHO05D004609 3.3e-70 269.2 212 67.9
Oeu047573.1 Olea europaea HOM05D003972 ORTHO05D004609 3.3e-70 269.2 275 56.4
PSO339G6021 Papaver somniferum HOM05D003972 ORTHO05D004609 2.8e-69 266.2 267 56.2
HPP92_003787 Vanilla planifolia HOM05D003972 ORTHO05D004609 1.4e-68 263.8 270 52.6
PGR042G2196 Punica granatum HOM05D003972 ORTHO05D004609 1.8e-68 263.5 274 54.7
Migut.N01593 Erythranthe guttata HOM05D003972 ORTHO05D004609 6.9e-68 261.5 277 54.2
Nitab4.5_0002179g0040 Nicotiana tabacum HOM05D003972 ORTHO05D004609 1.5e-67 260.4 300 51.3
GSVIVG01032087001 Vitis vinifera HOM05D003972 ORTHO05D004609 3.4e-67 259.2 274 56.2
MBI04_g36067_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 4.5e-67 258.8 280 54.3
AUR62027419 Chenopodium quinoa HOM05D003972 ORTHO05D004609 5.9e-67 258.5 264 54.5
Glyma.08G155200 Glycine max HOM05D003972 ORTHO05D004609 5.9e-67 258.5 273 54.9
SalBow6G4991 Salvia bowleyana HOM05D003972 ORTHO05D004609 7.7e-67 258.1 271 55.7
AUR62027358 Chenopodium quinoa HOM05D003972 ORTHO05D004609 1.0e-66 257.7 262 55.0
SalBow8G4898 Salvia bowleyana HOM05D003972 ORTHO05D004609 2.9e-66 256.1 216 64.4
TPR.G12160 Trifolium pratense HOM05D003972 ORTHO05D004609 1.1e-65 254.2 269 53.2
Glyma.15G273900 Glycine max HOM05D003972 ORTHO05D004609 1.9e-65 253.4 273 53.8
vmacro21185 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 2.5e-65 253.1 356 45.8
unitig_8.g3624 Utricularia gibba HOM05D003972 ORTHO05D004609 4.2e-65 252.3 276 52.9
MBI01_g18885_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 2.7e-64 249.6 280 54.3
Ah.06g182390 Amaranthus hybridus HOM05D003972 ORTHO05D004609 3.6e-64 249.2 284 53.5
Sabra09G0045500 Salix brachista HOM05D003972 ORTHO05D004609 3.6e-64 249.2 275 52.0
SalBow5G3531 Salvia bowleyana HOM05D003972 ORTHO05D004609 4.6e-64 248.8 280 52.9
Phvul.005G021000 Phaseolus vulgaris HOM05D003972 ORTHO05D004609 6.1e-64 248.4 273 52.4
VMungo1080G1024 Vigna mungo HOM05D003972 ORTHO05D004609 1.0e-63 247.7 273 52.4
arahy.Tifrunner.gnm1.ann1.9I3PL7 Arachis hypogaea HOM05D003972 ORTHO05D004609 1.4e-63 247.3 269 53.2
arahy.Tifrunner.gnm1.ann1.XF35YI Arachis hypogaea HOM05D003972 ORTHO05D004609 1.4e-63 247.3 269 53.2
Potri.009G061600 Populus trichocarpa HOM05D003972 ORTHO05D004609 1.8e-63 246.9 275 50.9
Ah.06g182400 Amaranthus hybridus HOM05D003972 ORTHO05D004609 2.3e-63 246.5 263 54.4
Os06g0646500 Oryza sativa ssp. japonica HOM05D003972 ORTHO05D004609 3.9e-63 245.7 214 61.7
DCAR_006337 Daucus carota HOM05D003972 ORTHO05D004609 5.1e-63 245.4 268 53.0
Lsat_1_v5_gn_1_107400 Lactuca sativa HOM05D003972 ORTHO05D004609 5.1e-63 245.4 276 52.5
Lj9A631T54 Lonicera japonica HOM05D003972 ORTHO05D004609 1.1e-62 244.2 283 52.7
Ca_14380_v3 Cicer arietinum L. HOM05D003972 ORTHO05D004609 1.5e-62 243.8 269 52.4
SGA_v2.0_scaffold24G10676 Striga asiatica HOM05D003972 ORTHO05D004609 1.5e-62 243.8 248 57.3
Lalb_Chr11g0073961 Lupinus albus HOM05D003972 ORTHO05D004609 2.0e-62 243.4 273 53.1
Lalb_Chr08g0232821 Lupinus albus HOM05D003972 ORTHO05D004609 9.7e-62 241.1 274 52.9
RcHm_v2.0_Chr7g0187561 Rosa chinensis HOM05D003972 ORTHO05D004609 9.7e-62 241.1 277 50.5
Lj4g0010030 Lotus japonicus HOM05D003972 ORTHO05D004609 1.3e-61 240.7 270 53.0
Medtr3g028730 Medicago truncatula HOM05D003972 ORTHO05D004609 1.7e-61 240.4 269 50.2
ATR0605G205 Amborella trichopoda HOM05D003972 ORTHO05D004609 2.2e-61 240.0 280 51.4
Aa31LG5G18610 Aethionema arabicum HOM05D003972 ORTHO05D004609 2.8e-61 239.6 218 59.2
Psat5g207400 Pisum sativum HOM05D003972 ORTHO05D004609 3.7e-61 239.2 267 52.1
C03p07030 Brassica napus HOM05D003972 ORTHO05D004609 8.2e-61 238.0 269 52.4
BolC3t13201H Brassica oleracea HOM05D003972 ORTHO05D004609 8.2e-61 238.0 269 52.4
CDE05G0778 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 1.8e-60 236.9 279 48.0
BcaNung01885 Brassica carinata HOM05D003972 ORTHO05D004609 2.4e-60 236.5 276 50.7
FvH4_5g10590 Fragaria vesca HOM05D003972 ORTHO05D004609 2.4e-60 236.5 285 49.5
CDE05G2400 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 3.1e-60 236.1 248 52.8
FAN18G0724 Fragaria x ananassa HOM05D003972 ORTHO05D004609 4.1e-60 235.7 273 49.8
BcaNung01153 Brassica carinata HOM05D003972 ORTHO05D004609 9.1e-60 234.6 269 50.9
BolC2t06557H Brassica oleracea HOM05D003972 ORTHO05D004609 9.1e-60 234.6 269 50.9
A03p05990 Brassica napus HOM05D003972 ORTHO05D004609 1.2e-59 234.2 280 50.0
BraA03t09936Z Brassica rapa HOM05D003972 ORTHO05D004609 2.0e-59 233.4 280 50.0
BcaC04g19115 Brassica carinata HOM05D003972 ORTHO05D004609 2.6e-59 233.0 279 50.2
A10p24800 Brassica napus HOM05D003972 ORTHO05D004609 2.6e-59 233.0 280 50.0
C09p63620 Brassica napus HOM05D003972 ORTHO05D004609 2.6e-59 233.0 280 49.6
Zm00001eb188600 Zea mays HOM05D003972 ORTHO05D004609 2.6e-59 233.0 263 51.7
BolC9t59206H Brassica oleracea HOM05D003972 ORTHO05D004609 4.5e-59 232.3 280 49.6
BraA10t44544Z Brassica rapa HOM05D003972 ORTHO05D004609 4.5e-59 232.3 280 49.6
CARHR199980 Cardamine hirsuta HOM05D003972 ORTHO05D004609 4.5e-59 232.3 275 49.5
Thhalv10014516m.g Eutrema salsugineum HOM05D003972 ORTHO05D004609 4.5e-59 232.3 280 49.3
FAN13G3241 Fragaria x ananassa HOM05D003972 ORTHO05D004609 4.5e-59 232.3 284 48.9
Sp6g30570 Schrenkiella parvula HOM05D003972 ORTHO05D004609 5.9e-59 231.9 279 50.2
Sed0014658 Sechium edule HOM05D003972 ORTHO05D004609 5.9e-59 231.9 273 53.1
A02p01940 Brassica napus HOM05D003972 ORTHO05D004609 1.0e-58 231.1 276 49.6
BraA02t05167Z Brassica rapa HOM05D003972 ORTHO05D004609 1.0e-58 231.1 276 49.6
FAN04G1554 Fragaria x ananassa HOM05D003972 ORTHO05D004609 2.2e-58 229.9 285 48.4
Carub.0006s1161 Capsella rubella HOM05D003972 ORTHO05D004609 2.9e-58 229.6 280 48.2
THA.LOC104809854 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 5.0e-58 228.8 280 47.5
THA.LOC104819071 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 1.9e-57 226.9 274 48.5
BcaB01g05358 Brassica carinata HOM05D003972 ORTHO05D004609 4.2e-57 225.7 269 51.7
SGA_v2.0_scaffold5G02971 Striga asiatica HOM05D003972 ORTHO05D004609 4.2e-57 225.7 378 41.3
Aa31LG3G15250 Aethionema arabicum HOM05D003972 ORTHO05D004609 5.5e-57 225.3 291 46.7
AT5G13450 Arabidopsis thaliana HOM05D003972 ORTHO05D004609 1.4e-55 220.7 218 54.1
AL6G24070 Arabidopsis lyrata HOM05D003972 ORTHO05D004609 1.8e-55 220.3 218 54.1
SHI04087 Sapria himalayana HOM05D003972 ORTHO05D004609 2.0e-54 216.9 212 55.7
Rhsim01G0129500 Rhododendron simsii HOM05D003972 ORTHO05D004609 2.8e-53 213.0 293 46.4
SalBow5G0402 Salvia bowleyana HOM05D003972 ORTHO05D004609 3.5e-51 206.1 218 55.0
Cc02_g27920 Coffea canephora HOM05D003972 ORTHO05D004609 8.5e-50 201.4 175 63.4
SEGI_23171 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 7.2e-49 198.4 269 46.1
MELO3C030924.2 Cucumis melo HOM05D003972 ORTHO05D004609 7.5e-46 188.3 171 64.9
CsaV3_3G032180 Cucumis sativus L. HOM05D003972 ORTHO05D004609 7.5e-46 188.3 113 86.7
Cpa.g.sc245.17 Carica papaya HOM05D003972 ORTHO05D004609 9.1e-44 181.4 276 44.2
SEGI_22482 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 1.6e-43 180.6 215 49.8
Dinv43448 Davidia involucrata HOM05D003972 ORTHO05D004609 2.0e-43 180.3 203 54.7
QL04p007936 Quercus lobata HOM05D003972 ORTHO05D004609 1.8e-39 167.2 146 63.0
Haze_18530 Corylus avellana HOM05D003972 ORTHO05D004609 1.7e-37 160.6 141 61.7
Haze_20480 Corylus avellana HOM05D003972 ORTHO05D004609 4.8e-37 159.1 141 61.7
BcaB06g27143 Brassica carinata HOM05D003972 ORTHO05D004609 8.3e-37 158.3 184 50.0
C02p06160 Brassica napus HOM05D003406 ORTHO05D004026 1.3e-34 151.0 121 63.6
CBR_g17944 Chara braunii HOM05D003972 ORTHO05D004609 7.2e-33 145.2 216 39.8
Pp3c21_15430 Physcomitrium patens HOM05D003972 ORTHO05D004609 9.5e-33 144.8 212 38.2
Pp3c21_13430 Physcomitrium patens HOM05D003972 ORTHO05D004609 3.6e-32 142.9 212 37.7
Mapoly0003s0068 Marchantia polymorpha HOM05D003972 ORTHO05D004609 5.2e-31 139.0 211 38.4
Eucgr.I01987 Eucalyptus grandis HOM05D003972 ORTHO05D004609 3.4e-30 136.3 325 35.4
Actinidia21554 Actinidia chinensis HOM05D003972 ORTHO05D004609 1.7e-29 134.0 218 42.7
GSVIVG01024256001 Vitis vinifera HOM05D003972 ORTHO05D004609 2.9e-26 123.2 87 73.6
Cpa.g.c41216 Carica papaya HOM05D003972 ORTHO05D004609 2.5e-25 120.2 72 81.9
AagrBONN_evm.TU.Sc2ySwM_344.1217 Anthoceros agrestis HOM05D003972 ORTHO05D004609 5.6e-25 119.0 183 40.4
Sc10g0000050 Simmondsia chinensis HOM05D003972 ORTHO05D004609 1.2e-24 117.9 72 79.2
CsaV3_3G032190 Cucumis sativus L. HOM05D003972 ORTHO05D004609 1.6e-24 117.5 115 60.0
Pp3c11_16260 Physcomitrium patens HOM05D003972 ORTHO05D004609 5.2e-23 112.5 213 31.5
MCO05G116 Micromonas commoda HOM05D003972 ORTHO05D004609 8.9e-23 111.7 211 33.2
SMO228G0064 Selaginella moellendorffii HOM05D003972 ORTHO05D004609 1.8e-20 104.0 213 28.6
MELO3C030665.2 Cucumis melo HOM05D003972 ORTHO05D004609 5.9e-19 99.0 67 77.6
PRCOL_00004246 Prasinoderma coloniale HOM05D003972 ORTHO05D004609 1.5e-17 94.4 208 32.7
Rhsim01G0081100 Rhododendron simsii HOM05D003972 ORTHO05D004609 9.5e-17 91.7 70 68.6
Rhsim01G0052900 Rhododendron simsii HOM05D003972 ORTHO05D004609 2.8e-16 90.1 70 67.1
Rhsim02G0048300 Rhododendron simsii HOM05D003972 ORTHO05D004609 2.8e-16 90.1 70 65.7
BcaB01g02352 Brassica carinata HOM05D003895 ORTHO05D004723 8.0e-16 88.6 66 63.6
Rhsim02G0189700 Rhododendron simsii HOM05D003972 ORTHO05D004609 8.0e-16 88.6 70 64.3
BcaB01g00975 Brassica carinata HOM05D003895 ORTHO05D004723 6.8e-15 85.5 66 62.1
Cre16.g680000 Chlamydomonas reinhardtii HOM05D003972 ORTHO05D004609 1.7e-13 80.9 206 28.2
Manes.07G005701 Manihot esculenta HOM05D003972 ORTHO05D004609 1.6e-11 74.3 101 45.5
BcaB05g22068 Brassica carinata HOM05D003895 ORTHO05D004723 4.6e-11 72.8 67 58.2
MCO11G452 Micromonas commoda HOM05D003160 ORTHO05D005967 5.6e-09 65.9 208 23.6
vmacro04777 Vaccinium macrocarpon HOM05D003160 ORTHO05D005967 9.5e-09 65.1 208 27.4
Rhsim07G0198600 Rhododendron simsii HOM05D003160 ORTHO05D005967 3.1e-07 60.1 210 24.8
Migut.C00219 Erythranthe guttata HOM05D003160 ORTHO05D005967 3.4e-06 56.6 205 24.9
Lsat_1_v5_gn_5_111580 Lactuca sativa HOM05D000217 ORTHO05D000121 7.5e-06 55.5 40 65.0
arahy.Tifrunner.gnm1.ann1.2I1I1C Arachis hypogaea HOM05D003160 ORTHO05D005967 9.9e-06 55.1 205 23.9
Lj4A710G52 Lonicera japonica HOM05D003160 ORTHO05D005967 9.9e-06 55.1 199 23.6


User provided reference genes

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