Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G011430 Citrullus lanatus HOM05D000043 ORTHO05D000600 1.9e-84 315.8 163 100.0
CsaV3_4G001240 Cucumis sativus L. HOM05D000043 ORTHO05D000600 8.8e-66 253.8 168 79.2
MELO3C017914.2 Cucumis melo HOM05D000043 ORTHO05D000600 2.2e-61 239.2 168 78.0
Sed0000097 Sechium edule HOM05D000043 ORTHO05D000600 3.4e-41 172.2 171 62.0
Prupe.8G266500 Prunus persica HOM05D000043 ORTHO05D000600 4.1e-15 85.5 152 39.5
MD03G1294400 Malus domestica HOM05D000043 ORTHO05D000600 4.6e-14 82.0 154 36.4
RcHm_v2.0_Chr7g0241111 Rosa chinensis HOM05D000043 ORTHO05D000600 5.0e-13 78.6 161 37.3
QL12p019788 Quercus lobata HOM05D000043 ORTHO05D000600 3.3e-12 75.9 165 33.9
TAR362G0348 Trochodendron aralioides HOM05D000043 ORTHO05D000600 1.2e-11 73.9 130 40.0
Atru.chr5.990 Acer truncatum HOM05D000043 ORTHO05D000600 6.2e-11 71.6 164 34.8
FvH4_5g39120 Fragaria vesca HOM05D000043 ORTHO05D000600 8.0e-11 71.2 169 33.7
FAN18G2035 Fragaria x ananassa HOM05D000043 ORTHO05D000600 8.0e-11 71.2 169 33.7
Cfa005791 Carpinus fangiana HOM05D000043 ORTHO05D000600 1.4e-10 70.5 168 32.7
FAN08G0170 Fragaria x ananassa HOM05D000043 ORTHO05D000600 6.8e-10 68.2 173 32.4
FAN13G2323 Fragaria x ananassa HOM05D000043 ORTHO05D000600 6.8e-10 68.2 169 33.1
FAN04G2857 Fragaria x ananassa HOM05D000043 ORTHO05D000600 8.9e-10 67.8 163 34.4
Haze_05047 Corylus avellana HOM05D000043 ORTHO05D000600 1.5e-09 67.0 155 32.3
Rhsim01G0291200 Rhododendron simsii HOM05D000043 ORTHO05D000600 1.5e-09 67.0 145 37.2
FAN18G4366 Fragaria x ananassa HOM05D000043 ORTHO05D000600 2.0e-09 66.6 155 34.2
Peaxi162Scf00691g00320 Petunia axillaris HOM05D000043 ORTHO05D000600 2.0e-09 66.6 99 43.4
Nitab4.5_0003540g0090 Nicotiana tabacum HOM05D000043 ORTHO05D000600 2.6e-09 66.2 130 36.2
Sabra02G0161200 Salix brachista HOM05D000043 ORTHO05D000600 4.4e-09 65.5 168 35.7
CiPaw.08G089500 Carya illinoinensis HOM05D000043 ORTHO05D000600 5.8e-09 65.1 165 30.3
Gohir.D12G128400 Gossypium hirsutum HOM05D000043 ORTHO05D000600 5.8e-09 65.1 164 30.5
Dinv10103 Davidia involucrata HOM05D000043 ORTHO05D000600 7.5e-09 64.7 142 36.6
TWI18G0641 Tripterygium wilfordii HOM05D000043 ORTHO05D000600 3.7e-08 62.4 170 34.1
GSVIVG01028123001 Vitis vinifera HOM05D000043 ORTHO05D000600 3.7e-08 62.4 129 34.9
Eucgr.K03547 Eucalyptus grandis HOM05D000043 ORTHO05D000600 4.9e-08 62.0 178 32.6
Gorai.008G139200 Gossypium raimondii HOM05D000043 ORTHO05D000600 4.9e-08 62.0 164 29.9
Nitab4.5_0005458g0020 Nicotiana tabacum HOM05D000043 ORTHO05D000600 4.9e-08 62.0 99 40.4
Manes.05G003900 Manihot esculenta HOM05D000043 ORTHO05D000600 1.9e-07 60.1 139 34.5
Hund02942 Selenicereus undatus HOM05D000043 ORTHO05D000600 1.9e-07 60.1 106 39.6
Potri.002G195800 Populus trichocarpa HOM05D000043 ORTHO05D000600 3.2e-07 59.3 166 30.7
CSS0040548 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D000600 5.4e-07 58.5 125 36.0
PGSC0003DMG400009012 Solanum tuberosum HOM05D000043 ORTHO05D000600 9.2e-07 57.8 100 40.0
Duzib133G0336 Durio zibethinus HOM05D000043 ORTHO05D000600 2.7e-06 56.2 157 30.6
Nn3g21699 Nelumbo nucifera HOM05D000043 ORTHO05D000600 2.7e-06 56.2 141 36.2
QL12p019841 Quercus lobata HOM05D000043 ORTHO05D000600 3.5e-06 55.8 162 34.0
Gohir.A12G124500 Gossypium hirsutum HOM05D000043 ORTHO05D000600 4.6e-06 55.5 98 36.7
PGR044G1638 Punica granatum HOM05D000043 ORTHO05D000600 4.6e-06 55.5 95 41.1
arahy.Tifrunner.gnm1.ann1.A3NQC2 Arachis hypogaea HOM05D000043 ORTHO05D000600 6.0e-06 55.1 60 51.7


User provided reference genes

Program Settings