Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G010960 Citrullus lanatus HOM05D007933 ORTHO05D000001 2.1e-214 748.8 397 100.0
ClCG08G003520 Citrullus lanatus HOM05D007933 ORTHO05D000001 2.7e-52 210.3 243 55.1
ClCG03G009350 Citrullus lanatus HOM05D007933 ORTHO05D000001 3.2e-29 133.7 339 31.9
ClCG01G016080 Citrullus lanatus HOM05D000002 ORTHO05D000001 5.9e-23 112.8 346 29.5
ClCG01G011050 Citrullus lanatus HOM05D007933 ORTHO05D000001 7.7e-23 112.5 305 30.8
TPR.G3798 Trifolium pratense HOM05D000002 ORTHO05D000001 3.0e-19 100.5 131 39.7
TPR.G29769 Trifolium pratense HOM05D000002 ORTHO05D000001 2.8e-17 94.0 141 34.8
ClCG11G010340 Citrullus lanatus HOM05D007933 ORTHO05D010776 6.3e-17 92.8 278 30.9
Sed0021821 Sechium edule HOM05D000002 ORTHO05D000001 5.9e-15 86.3 151 38.4
Solyc05g015654.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.2e-12 78.6 149 31.5
TPR.G27418 Trifolium pratense HOM05D000002 ORTHO05D000001 3.6e-12 77.0 115 38.3
Atru.chr2.3035 Acer truncatum HOM05D000002 ORTHO05D000001 8.0e-12 75.9 163 33.7
Psat0s2600g0040 Pisum sativum HOM05D000002 ORTHO05D010776 8.0e-12 75.9 276 27.2
Psat0s899g0080 Pisum sativum HOM05D000002 ORTHO05D010776 8.0e-12 75.9 276 27.2
TPR.G36567 Trifolium pratense HOM05D000002 ORTHO05D000001 6.7e-11 72.8 295 26.4
TPR.G22883 Trifolium pratense HOM05D000269 ORTHO05D000216 3.3e-10 70.5 117 34.2
Sabra06G0056900 Salix brachista HOM05D000002 ORTHO05D000001 4.4e-10 70.1 358 24.6
ClCG08G001120 Citrullus lanatus HOM05D000002 ORTHO05D000001 7.5e-10 69.3 273 23.4
ECA232G0227 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-10 69.3 124 33.9
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-09 68.6 141 29.1
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 68.6 425 21.6
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 68.6 425 21.6
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 68.6 425 21.6
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 68.6 425 21.6
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 68.6 425 21.6
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 68.6 425 21.6
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 68.6 425 21.6
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 68.6 425 21.6
ClCG03G011460 Citrullus lanatus HOM05D007933 ORTHO05D000001 3.7e-09 67.0 35 85.7
MD02G1303700 Malus domestica HOM05D000002 ORTHO05D000001 3.7e-09 67.0 156 28.2
ClCG04G001080 Citrullus lanatus HOM05D007933 ORTHO05D000001 6.3e-09 66.2 309 26.9
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.3e-09 66.2 297 25.3
Atru.chr3.3480 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-08 65.5 183 27.3
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-08 65.5 141 29.1
CsaV3_1G033790 Cucumis sativus L. HOM05D007933 ORTHO05D000001 2.4e-08 64.3 171 33.3
ClCG03G013390 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.1e-08 63.9 365 25.2
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 3.1e-08 63.9 141 29.1
Solyc04g076523.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.1e-08 63.9 180 25.6
MELO3C022687.2 Cucumis melo HOM05D007933 ORTHO05D010776 4.1e-08 63.5 122 37.7
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 4.1e-08 63.5 324 24.4
ClCG08G002140 Citrullus lanatus HOM05D000002 ORTHO05D000001 5.3e-08 63.2 232 25.0
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 5.3e-08 63.2 141 26.2
Sopen01g012540 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-08 63.2 251 27.1
Sopen01g033880 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-08 63.2 251 27.1
Sopen02g026060 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-08 63.2 251 27.1
Sopen03g027510 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-08 63.2 251 27.1
Sopen04g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-08 63.2 251 27.1
Sopen07g021230 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-08 63.2 251 27.1
Sopen08g003220 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-08 63.2 251 27.1
Sopen09g009630 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-08 63.2 251 27.1
MD12G1020900 Malus domestica HOM05D000103 ORTHO05D000001 1.2e-07 62.0 134 28.4
Atru.chr8.532 Acer truncatum HOM05D000002 ORTHO05D000001 1.6e-07 61.6 166 28.9
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-07 61.6 134 26.9
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.6e-07 61.6 288 24.7
Rhsim02G0101600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.0e-07 61.2 132 30.3
Sed0022044 Sechium edule HOM05D007933 ORTHO05D000001 2.0e-07 61.2 98 39.8
CSS0012998 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-07 60.8 138 31.2
ECA248G2283 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-07 60.8 124 26.6
MD12G1052500 Malus domestica HOM05D000002 ORTHO05D000001 2.6e-07 60.8 134 26.1
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 3.5e-07 60.5 126 31.7
CSS0015658 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-07 60.5 130 29.2
MD08G1001800 Malus domestica HOM05D000002 ORTHO05D000001 3.5e-07 60.5 149 26.2
Lalb_Chr06g0171641 Lupinus albus HOM05D000002 ORTHO05D000001 4.5e-07 60.1 151 27.8
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 4.5e-07 60.1 270 24.4
MD03G1056000 Malus domestica HOM05D000002 ORTHO05D000001 5.9e-07 59.7 60 43.3
Os02g0671800 Oryza sativa ssp. japonica HOM05D000002 ORTHO05D000001 5.9e-07 59.7 371 21.6
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 7.7e-07 59.3 130 30.0
CSS0005122 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-07 59.3 128 26.6
CSS0032534 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-07 59.3 137 30.7
ECA233G1829 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-07 59.3 142 27.5
MD09G1214100 Malus domestica HOM05D000002 ORTHO05D000001 7.7e-07 59.3 129 24.8
PSO541G1536 Papaver somniferum HOM05D000002 ORTHO05D000001 7.7e-07 59.3 161 29.8
Psat7g027600 Pisum sativum HOM05D015803 ORTHO05D010776 1.0e-06 58.9 179 30.2
Sopen10g024410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 58.9 276 24.6
PGSC0003DMG400018968 Solanum tuberosum HOM05D000002 ORTHO05D009653 1.0e-06 58.9 130 30.8
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.0e-06 58.9 311 23.8
CSS0001487 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 58.5 199 27.1
CSS0001737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 58.5 128 26.6
CSS0013254 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 58.2 130 28.5
ECA233G3460 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 58.2 144 31.2
FvH4_2g00591 Fragaria vesca HOM05D000002 ORTHO05D000001 1.7e-06 58.2 131 29.0
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-06 58.2 135 26.7
MD11G1197500 Malus domestica HOM05D000002 ORTHO05D000001 2.2e-06 57.8 129 27.1
Sopen03g022200 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-06 57.8 249 24.5
ClCG01G008370 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.9e-06 57.4 284 26.4
RcHm_v2.0_Chr2g0119341 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-06 57.4 244 32.4
Sed0027111 Sechium edule HOM05D007933 ORTHO05D000001 2.9e-06 57.4 71 46.5
Gohir.A07G189950 Gossypium hirsutum HOM05D017795 ORTHO05D000001 3.8e-06 57.0 133 27.8
Atru.chr6.1164 Acer truncatum HOM05D000002 ORTHO05D000001 5.0e-06 56.6 312 24.7
CSS0000236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-06 56.6 132 28.8
CSS0042540 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-06 56.6 132 28.8
CSS0046407 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-06 56.6 132 28.8
ECA246G0311 Erigeron canadensis HOM05D002833 ORTHO05D003210 8.5e-06 55.8 58 39.7
Rhsim11G0062800 Rhododendron simsii HOM05D007908 ORTHO05D009653 8.5e-06 55.8 131 26.7


User provided reference genes

Program Settings