Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 9.5e-150 533.5 270 100.0
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 1.5e-134 483.0 271 92.3
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 1.5e-134 483.0 271 92.3
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 4.0e-100 368.6 288 70.8
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 5.8e-99 364.8 264 77.3
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 1.0e-98 364.0 279 70.6
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 4.2e-97 358.6 277 71.1
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.5e-96 355.5 280 70.0
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 3.3e-94 349.0 285 66.7
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 2.1e-93 346.3 278 67.6
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 1.1e-92 344.0 287 68.3
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 1.1e-92 344.0 278 68.7
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 3.4e-91 339.0 265 71.3
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 1.3e-90 337.0 283 68.2
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.2e-90 336.3 284 67.6
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 9.3e-89 330.9 283 67.8
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.2e-88 330.5 280 66.4
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 2.1e-88 329.7 280 67.1
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 2.7e-88 329.3 280 65.7
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 3.5e-88 328.9 278 65.8
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 5.1e-87 325.1 277 65.7
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 2.5e-86 322.8 308 60.7
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 5.7e-86 321.6 281 66.2
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 5.7e-86 321.6 276 67.0
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 7.4e-86 321.2 285 63.9
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.3e-85 320.5 277 64.3
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.6e-85 320.1 272 64.3
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.1e-84 317.4 284 64.1
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 1.4e-84 317.0 284 64.1
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 1.8e-84 316.6 286 64.3
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.8e-84 316.6 284 64.1
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 9.0e-84 314.3 279 66.7
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 1.5e-83 313.5 277 66.1
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 7.7e-83 311.2 276 64.9
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 2.2e-82 309.7 279 64.5
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 2.2e-82 309.7 278 64.7
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 5.0e-82 308.5 284 62.7
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 2.5e-81 306.2 274 63.1
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.2e-80 303.9 285 62.5
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 2.1e-80 303.1 283 62.9
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 2.5e-78 296.2 280 62.9
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 1.7e-77 293.5 277 61.7
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 1.7e-77 293.5 281 60.9
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 1.7e-77 293.5 283 65.0
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 2.2e-77 293.1 284 62.3
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 4.5e-75 285.4 295 62.7
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 5.0e-74 282.0 274 59.1
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 8.5e-74 281.2 281 57.7
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 9.4e-73 277.7 293 56.3
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.1e-72 276.6 286 59.4
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 5.1e-71 271.9 274 58.0
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 3.3e-70 269.2 286 57.3
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 1.7e-69 266.9 291 56.4
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 1.7e-69 266.9 279 58.8
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.2e-69 266.5 278 58.6
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 2.8e-69 266.2 279 57.3
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 4.8e-69 265.4 279 58.8
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 8.2e-69 264.6 279 57.0
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 8.2e-69 264.6 279 57.0
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.8e-68 263.5 280 57.5
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 2.4e-68 263.1 275 58.5
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 4.1e-68 262.3 275 58.5
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 5.3e-68 261.9 305 56.1
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 3.5e-67 259.2 279 57.3
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 5.9e-67 258.5 275 57.8
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.3e-66 257.3 289 56.7
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 1.7e-66 256.9 278 57.2
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.7e-66 256.9 281 56.9
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.2e-66 256.5 272 57.7
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 2.9e-66 256.1 275 57.5
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 3.8e-66 255.8 287 55.7
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 5.0e-66 255.4 275 56.7
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 4.2e-65 252.3 247 61.1
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 5.5e-65 251.9 298 53.7
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 1.6e-64 250.4 284 55.3
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 6.1e-64 248.4 250 58.4
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 8.0e-64 248.1 270 58.1
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 5.7e-62 241.9 292 54.5
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 9.7e-62 241.1 201 68.7
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 2.2e-61 240.0 272 55.1
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 4.8e-61 238.8 276 57.6
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 4.8e-61 238.8 291 53.3
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 9.1e-60 234.6 281 55.9
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 7.7e-59 231.5 268 53.4
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 5.0e-58 228.8 238 59.7
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 3.2e-57 226.1 268 53.0
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 3.2e-57 226.1 249 57.4
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 6.8e-55 218.4 306 49.7
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 2.0e-54 216.9 279 51.3
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 1.7e-53 213.8 251 55.4
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 6.3e-53 211.8 220 60.5
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 2.2e-50 203.4 266 54.1
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 1.1e-49 201.1 260 54.2
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 4.7e-48 195.7 254 51.6
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 8.8e-47 191.4 210 57.1
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 1.5e-46 190.7 253 51.0
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 4.9e-45 185.7 169 68.0
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 8.3e-45 184.9 293 45.7
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 3.3e-41 172.9 286 44.4
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 3.3e-41 172.9 171 62.0
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 3.3e-41 172.9 242 51.7
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 3.6e-40 169.5 247 49.0
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 4.7e-40 169.1 338 39.6
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 6.4e-37 158.7 172 60.5
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 1.6e-35 154.1 250 42.4
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.1e-32 143.7 234 44.4
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 4.9e-29 132.5 242 43.0
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.1e-28 131.3 109 71.6
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.9e-28 130.6 244 44.3
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 3.9e-26 122.9 93 67.7
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 5.6e-25 119.0 239 41.4
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 4.3e-17 92.8 86 59.3
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 2.3e-15 87.0 74 62.2
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 5.2e-15 85.9 207 42.0
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 2.1e-11 73.9 80 55.0
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 6.0e-11 72.4 77 53.2
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 1.3e-10 71.2 89 49.4
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 1.3e-10 71.2 89 49.4
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 3.0e-10 70.1 41 75.6
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 3.9e-10 69.7 89 48.3
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 1.1e-09 68.2 41 73.2
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 3.3e-09 66.6 38 76.3
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 4.3e-09 66.2 62 56.5
VMungo0720G2130 Vigna mungo HOM05D002674 ORTHO05D007700 9.6e-09 65.1 35 77.1
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 1.2e-08 64.7 38 73.7
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 1.2e-08 64.7 38 73.7
Haze_04933 Corylus avellana HOM05D002674 ORTHO05D007700 1.2e-08 64.7 35 74.3
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 1.6e-08 64.3 37 75.7
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 3.6e-08 63.2 37 75.7
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 3.6e-08 63.2 65 53.8
Rhsim01G0284900 Rhododendron simsii HOM05D000113 ORTHO05D008110 9.9e-06 55.1 43 60.5


User provided reference genes

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