Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G010520 Citrullus lanatus HOM05D005520 ORTHO05D006633 4.9e-95 351.3 198 100.0
Sed0007262 Sechium edule HOM05D005520 ORTHO05D006633 2.4e-81 305.8 198 74.7
Haze_10245 Corylus avellana HOM05D005520 ORTHO05D006633 3.0e-68 262.3 199 64.3
Cfa004647 Carpinus fangiana HOM05D005520 ORTHO05D006633 1.1e-67 260.4 197 65.0
RcHm_v2.0_Chr6g0253041 Rosa chinensis HOM05D005520 ORTHO05D006633 1.4e-65 253.4 194 63.4
CiPaw.06G167100 Carya illinoinensis HOM05D005520 ORTHO05D006633 1.7e-63 246.5 196 62.8
Prupe.8G141400 Prunus persica HOM05D005520 ORTHO05D006633 2.2e-63 246.1 198 59.6
Migut.F01600 Erythranthe guttata HOM05D005520 ORTHO05D006633 3.2e-62 242.3 196 60.2
Potri.009G090200 Populus trichocarpa HOM05D005520 ORTHO05D006633 4.2e-62 241.9 144 78.5
PGR042G2710 Punica granatum HOM05D005520 ORTHO05D006633 1.2e-61 240.4 194 61.3
Duzib052G0352 Durio zibethinus HOM05D005520 ORTHO05D006633 2.1e-61 239.6 187 60.4
Dinv15795 Davidia involucrata HOM05D005520 ORTHO05D006633 3.5e-61 238.8 193 61.1
Dinv42222 Davidia involucrata HOM05D005520 ORTHO05D006633 6.0e-61 238.0 198 60.1
Gohir.D04G160500 Gossypium hirsutum HOM05D005520 ORTHO05D006633 6.0e-61 238.0 184 62.5
Gorai.012G148200 Gossypium raimondii HOM05D005520 ORTHO05D006633 6.0e-61 238.0 184 62.5
arahy.Tifrunner.gnm1.ann1.ZQ2RMB Arachis hypogaea HOM05D005520 ORTHO05D006633 1.8e-60 236.5 197 56.9
Gorai.013G049600 Gossypium raimondii HOM05D005520 ORTHO05D006633 1.8e-60 236.5 136 77.9
Gohir.A04G118800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 2.3e-60 236.1 184 61.4
MD10G1103100 Malus domestica HOM05D005520 ORTHO05D006633 2.3e-60 236.1 195 60.0
Manes.10G081300 Manihot esculenta HOM05D005520 ORTHO05D006633 3.0e-60 235.7 190 63.7
Gohir.D13G044800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 5.1e-60 235.0 136 77.9
Sabra09G0069800 Salix brachista HOM05D005520 ORTHO05D006633 6.7e-60 234.6 137 76.6
Eucgr.G01264 Eucalyptus grandis HOM05D005520 ORTHO05D006633 8.7e-60 234.2 193 59.6
Lj3g0017538 Lotus japonicus HOM05D005520 ORTHO05D006633 8.7e-60 234.2 194 59.8
TPR.G18583 Trifolium pratense HOM05D005520 ORTHO05D006633 1.1e-59 233.8 193 57.5
FAN20G2059 Fragaria x ananassa HOM05D005520 ORTHO05D006633 1.9e-59 233.0 211 56.4
MD05G1097000 Malus domestica HOM05D005520 ORTHO05D006633 1.9e-59 233.0 199 57.8
TPR.G14598 Trifolium pratense HOM05D005520 ORTHO05D006633 1.9e-59 233.0 193 58.0
Psat4g180760 Pisum sativum HOM05D005520 ORTHO05D006633 2.5e-59 232.6 193 60.6
Solyc11g071960.2 Solanum lycopersicum HOM05D005520 ORTHO05D006633 2.5e-59 232.6 195 63.1
SGA_v2.0_scaffold225G43026 Striga asiatica HOM05D005520 ORTHO05D006633 2.5e-59 232.6 121 86.0
CAN.G689.10 Capsicum annuum HOM05D005520 ORTHO05D006633 4.3e-59 231.9 197 62.9
Actinidia34369 Actinidia chinensis HOM05D005520 ORTHO05D006633 5.7e-59 231.5 189 62.4
HanXRQChr03g0069991 Helianthus annuus HOM05D005520 ORTHO05D006633 7.4e-59 231.1 191 57.6
Lj5A217G90 Lonicera japonica HOM05D005520 ORTHO05D006633 9.6e-59 230.7 139 77.0
Phvul.003G276100 Phaseolus vulgaris HOM05D005520 ORTHO05D006633 9.6e-59 230.7 193 57.0
Medtr8g045480 Medicago truncatula HOM05D005520 ORTHO05D006633 1.3e-58 230.3 193 57.5
THA.LOC104825832 Tarenaya hassleriana HOM05D005520 ORTHO05D006633 1.6e-58 229.9 187 60.4
VMungo0251G2197 Vigna mungo HOM05D005520 ORTHO05D006633 1.6e-58 229.9 193 57.5
CSS0014981 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 2.1e-58 229.6 200 57.5
Carub.0001s3909 Capsella rubella HOM05D005520 ORTHO05D006633 2.1e-58 229.6 191 57.1
TWI14G1052 Tripterygium wilfordii HOM05D005520 ORTHO05D006633 2.1e-58 229.6 197 57.9
Ciclev10029310m.g Citrus clementina HOM05D005520 ORTHO05D006633 2.8e-58 229.2 196 59.2
MSTRG.16689 Avicennia marina HOM05D005520 ORTHO05D006633 3.7e-58 228.8 196 57.7
Medtr1g050465 Medicago truncatula HOM05D005520 ORTHO05D006633 3.7e-58 228.8 193 56.5
RcHm_v2.0_Chr6g0253051 Rosa chinensis HOM05D005520 ORTHO05D006633 3.7e-58 228.8 121 83.5
unitig_37.g12800 Utricularia gibba HOM05D005520 ORTHO05D006633 3.7e-58 228.8 188 57.4
Sc18g0003610 Simmondsia chinensis HOM05D005520 ORTHO05D006633 6.3e-58 228.0 200 58.5
Sopen11g029630 Solanum pennellii HOM05D005520 ORTHO05D006633 6.3e-58 228.0 195 62.6
GSVIVG01037859001 Vitis vinifera HOM05D005520 ORTHO05D006633 8.2e-58 227.6 196 59.7
Peaxi162Scf00429g00622 Petunia axillaris HOM05D005520 ORTHO05D006633 1.1e-57 227.3 120 85.0
Sp1g36760 Schrenkiella parvula HOM05D005520 ORTHO05D006633 1.1e-57 227.3 191 57.1
Thhalv10011740m.g Eutrema salsugineum HOM05D005520 ORTHO05D006633 1.4e-57 226.9 192 57.3
AL1G57420 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 1.8e-57 226.5 191 57.1
EL10Ac8g19365 Beta vulgaris HOM05D005520 ORTHO05D006633 1.8e-57 226.5 189 59.3
Lj4g0000264 Lotus japonicus HOM05D005520 ORTHO05D006633 1.8e-57 226.5 141 74.5
BraA08t32384Z Brassica rapa HOM05D005520 ORTHO05D006633 3.1e-57 225.7 192 57.3
Cpa.g.sc106.74 Carica papaya HOM05D005520 ORTHO05D006633 5.3e-57 224.9 204 61.8
PGSC0003DMG400002983 Solanum tuberosum HOM05D005520 ORTHO05D006633 5.3e-57 224.9 120 82.5
TAR625G0105 Trochodendron aralioides HOM05D000641 ORTHO05D006633 5.3e-57 224.9 127 78.7
Migut.B00427 Erythranthe guttata HOM05D005520 ORTHO05D006633 9.0e-57 224.2 122 82.0
Lalb_Chr24g0402091 Lupinus albus HOM05D005520 ORTHO05D006633 1.5e-56 223.4 193 54.9
Rhsim11G0154200 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.5e-56 223.4 197 57.4
arahy.Tifrunner.gnm1.ann1.DF92AY Arachis hypogaea HOM05D005520 ORTHO05D006633 2.6e-56 222.6 212 52.4
A08p03510 Brassica napus HOM05D005520 ORTHO05D006633 2.6e-56 222.6 192 56.2
BolC3t21249H Brassica oleracea HOM05D005520 ORTHO05D006633 2.6e-56 222.6 191 57.1
C03p89340 Brassica napus HOM05D005520 ORTHO05D006633 4.5e-56 221.9 193 57.0
Lsat_1_v5_gn_9_112480 Lactuca sativa HOM05D005520 ORTHO05D006633 4.5e-56 221.9 196 56.6
COL.COLO4_32538 Corchorus olitorius HOM05D005520 ORTHO05D006633 5.9e-56 221.5 138 73.9
QL11p031741 Quercus lobata HOM05D005520 ORTHO05D006633 5.9e-56 221.5 268 47.4
SalBow6G1186 Salvia bowleyana HOM05D005520 ORTHO05D006633 1.0e-55 220.7 136 74.3
SalBow6G6323 Salvia bowleyana HOM05D005520 ORTHO05D006633 1.0e-55 220.7 136 74.3
Nitab4.5_0000158g0130 Nicotiana tabacum HOM05D005520 ORTHO05D006633 1.3e-55 220.3 185 58.9
Nitab4.5_0008364g0030 Nicotiana tabacum HOM05D005520 ORTHO05D006633 1.3e-55 220.3 195 56.9
CARHR039940 Cardamine hirsuta HOM05D005520 ORTHO05D006633 1.7e-55 219.9 139 69.8
ECA240G0181 Erigeron canadensis HOM05D005520 ORTHO05D006633 2.9e-55 219.2 124 78.2
CANSAT25G2379 Cannabis sativa HOM05D005520 ORTHO05D006633 1.1e-54 217.2 126 75.4
DCAR_021961 Daucus carota HOM05D005520 ORTHO05D006633 2.5e-54 216.1 190 59.5
Rhsim05G0090000 Rhododendron simsii HOM05D005520 ORTHO05D006633 4.2e-54 215.3 198 54.5
CDE07G0521 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 7.9e-53 211.1 128 72.7
PSO541G2579 Papaver somniferum HOM05D005520 ORTHO05D006633 2.3e-52 209.5 116 79.3
FAN15G3606 Fragaria x ananassa HOM05D005520 ORTHO05D006633 3.0e-52 209.1 191 57.1
CDE04G3180 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 3.9e-52 208.8 122 73.0
PSO675G3202 Papaver somniferum HOM05D005520 ORTHO05D006633 8.7e-52 207.6 116 78.4
Migut.B00429 Erythranthe guttata HOM05D005520 ORTHO05D009373 1.6e-50 203.4 172 58.7
Aa31LG10G4210 Aethionema arabicum HOM05D001821 ORTHO05D006633 2.2e-50 203.0 169 56.8
Zm00001eb007440 Zea mays HOM05D005520 ORTHO05D006633 2.2e-50 203.0 117 72.6
FAN24G1644 Fragaria x ananassa HOM05D005520 ORTHO05D006633 6.3e-50 201.4 200 54.5
HPP92_023672 Vanilla planifolia HOM05D005520 ORTHO05D006633 6.3e-50 201.4 116 74.1
HPP92_023689 Vanilla planifolia HOM05D005520 ORTHO05D006633 6.3e-50 201.4 116 74.1
SMO172G0176 Selaginella moellendorffii HOM05D005520 ORTHO05D006633 5.3e-49 198.4 120 73.3
SEGI_34662 Sequoiadendron giganteum HOM05D005520 ORTHO05D006633 3.4e-48 195.7 118 71.2
RcHm_v2.0_Chr6g0253221 Rosa chinensis HOM05D005520 ORTHO05D006633 1.3e-47 193.7 129 72.1
Cc02_g19680 Coffea canephora HOM05D005520 ORTHO05D006633 1.7e-47 193.4 171 57.3
Glyma.13G199600 Glycine max HOM05D005520 ORTHO05D006633 1.9e-46 189.9 193 50.3
Pp3c2_36820 Physcomitrium patens HOM05D005520 ORTHO05D006633 2.5e-46 189.5 114 72.8
BcaB04g17288 Brassica carinata HOM05D005520 ORTHO05D006633 6.1e-45 184.9 201 49.8
Mapoly0036s0053 Marchantia polymorpha HOM05D005520 ORTHO05D006633 6.1e-45 184.9 126 65.9
RhsimUnG0125400 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.5e-43 180.3 119 70.6
Atru.chr5.2403 Acer truncatum HOM05D005520 ORTHO05D006633 4.3e-43 178.7 92 84.8
Psat7g087120 Pisum sativum HOM05D005520 ORTHO05D006633 5.3e-41 171.8 164 56.7
CBR_g2851 Chara braunii HOM05D005520 ORTHO05D006633 9.1e-41 171.0 124 54.8
AT1G49880 Arabidopsis thaliana HOM05D005520 ORTHO05D006633 1.0e-39 167.5 156 52.6
Oeu009678.2 Olea europaea HOM05D005520 ORTHO05D006633 1.9e-38 163.3 253 39.9
Pp3c19_18310 Physcomitrium patens HOM05D005520 ORTHO05D006633 1.9e-38 163.3 136 54.4
Psat6g139520 Pisum sativum HOM05D005520 ORTHO05D006633 2.5e-38 162.9 94 76.6
CBR_g31027 Chara braunii HOM05D005520 ORTHO05D006633 9.4e-38 161.0 113 56.6
vmacro01971 Vaccinium macrocarpon HOM05D005520 ORTHO05D006633 2.3e-36 156.4 125 61.6
Actinidia27983 Actinidia chinensis HOM05D005520 ORTHO05D006633 8.8e-36 154.5 85 77.6
Cre03.g173200 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 1.6e-32 143.7 102 57.8
FvH4_2g03990 Fragaria vesca HOM05D005520 ORTHO05D006633 5.0e-31 138.7 131 55.7
AUR62022505 Chenopodium quinoa HOM05D005520 ORTHO05D006633 1.5e-30 137.1 175 46.3
MELO3C017991.2 Cucumis melo HOM05D005520 ORTHO05D006633 1.9e-30 136.7 149 51.7
Potri.001G296000 Populus trichocarpa HOM05D005520 ORTHO05D006633 2.1e-29 133.3 201 41.3
CsaV3_4G000440 Cucumis sativus L. HOM05D005520 ORTHO05D006633 1.4e-28 130.6 149 67.8
CBR_g38847 Chara braunii HOM05D005520 ORTHO05D006633 2.3e-28 129.8 106 50.0
Ca_24141_v3 Cicer arietinum L. HOM05D005520 ORTHO05D006633 1.5e-27 127.1 158 45.6
Medtr0857s0010 Medicago truncatula HOM05D005520 ORTHO05D006633 2.6e-27 126.3 63 87.3
Thecc.02G114500 Theobroma cacao HOM05D005520 ORTHO05D006633 3.7e-26 122.5 133 51.9
PRCOL_00001319 Prasinoderma coloniale HOM05D000442 ORTHO05D001718 6.3e-26 121.7 123 45.5
Hund12620 Selenicereus undatus HOM05D005520 ORTHO05D006633 1.1e-25 120.9 258 34.1
Haze_26784 Corylus avellana HOM05D005520 ORTHO05D006633 1.4e-25 120.6 100 45.0
Nn1g07564 Nelumbo nucifera HOM05D005520 ORTHO05D006633 1.8e-25 120.2 69 75.4
MCO01G292 Micromonas commoda HOM05D005520 ORTHO05D006633 1.2e-24 117.5 96 52.1
Aqoxy6G02716 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 1.0e-23 114.4 63 84.1
CSS0022898 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 1.3e-23 114.0 96 56.2
Cre14.g633000 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 8.5e-23 111.3 103 47.6
Aqoxy6G02727 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 1.5e-22 110.5 61 75.4
Ciclev10029975m.g Citrus clementina HOM05D005520 ORTHO05D006633 1.5e-22 110.5 57 82.5
Cfa024926 Carpinus fangiana HOM05D000137 ORTHO05D122446 1.7e-18 97.1 113 37.2
MCO01G319 Micromonas commoda HOM05D005520 ORTHO05D006633 1.8e-17 93.6 104 43.3
Glyma.15G237900 Glycine max HOM05D005520 ORTHO05D006633 9.1e-17 91.3 110 46.4
SHI05087 Sapria himalayana HOM05D005520 ORTHO05D006633 3.6e-13 79.3 74 48.6
AL1G58430 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 7.5e-11 71.6 111 37.8
A06p03510 Brassica napus HOM05D005520 ORTHO05D006633 2.4e-09 66.6 34 79.4
BraA06t23559Z Brassica rapa HOM05D005520 ORTHO05D006633 2.4e-09 66.6 34 79.4
Os03g0206300 Oryza sativa ssp. japonica HOM05D005520 ORTHO05D006633 4.1e-09 65.9 42 64.3
ATR0165G041 Amborella trichopoda HOM05D005520 ORTHO05D006633 4.5e-08 62.4 39 69.2


User provided reference genes

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