Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 3.1e-245 851.3 401 100.0
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 9.5e-231 803.1 401 95.0
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 5.3e-213 744.2 394 89.3
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.2e-209 733.0 435 84.1
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 3.9e-184 648.3 398 77.6
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 1.1e-183 646.7 398 77.1
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 1.9e-183 646.0 395 78.7
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 7.4e-183 644.0 408 77.0
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 9.7e-183 643.7 398 76.6
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.3e-182 643.3 396 77.0
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 2.8e-182 642.1 396 77.3
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 4.1e-181 638.3 414 73.9
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 1.3e-179 633.3 326 87.4
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 2.9e-179 632.1 415 74.9
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 2.9e-179 632.1 363 81.8
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 5.0e-179 631.3 352 83.8
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 8.5e-179 630.6 411 73.2
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 2.5e-178 629.0 343 84.5
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 2.5e-178 629.0 357 81.5
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 5.5e-178 627.9 403 75.2
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.2e-177 626.7 361 81.4
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 1.6e-177 626.3 339 84.1
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 1.6e-177 626.3 399 74.2
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 1.6e-177 626.3 357 80.1
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.1e-177 625.9 394 76.1
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 6.1e-177 624.4 357 81.2
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 7.9e-177 624.0 398 73.6
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 7.9e-177 624.0 354 82.5
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 7.9e-177 624.0 353 81.6
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 1.4e-176 623.2 395 75.2
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.4e-176 623.2 394 75.9
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 2.3e-176 622.5 393 76.6
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 3.0e-176 622.1 394 75.6
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 3.0e-176 622.1 390 77.4
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 3.9e-176 621.7 355 82.5
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 1.1e-175 620.2 357 80.4
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.3e-175 618.6 393 75.3
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 3.3e-175 618.6 390 75.1
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 7.4e-175 617.5 333 84.7
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 7.4e-175 617.5 329 84.8
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 9.7e-175 617.1 396 74.0
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.7e-174 616.3 350 82.3
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.7e-174 616.3 393 75.1
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.7e-174 616.3 377 76.9
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 2.2e-174 615.9 327 85.3
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 2.8e-174 615.5 332 84.9
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 6.3e-174 614.4 367 79.0
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 1.1e-173 613.6 393 74.8
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 1.4e-173 613.2 382 75.4
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 2.6e-172 609.0 355 79.4
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 3.4e-172 608.6 339 82.6
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.8e-171 605.1 323 85.1
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 8.5e-171 604.0 335 83.0
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 1.1e-170 603.6 340 80.9
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 1.1e-170 603.6 316 85.8
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 7.2e-170 600.9 318 85.2
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 7.2e-170 600.9 393 72.5
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 9.4e-170 600.5 416 70.9
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.2e-169 600.1 336 81.2
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 1.6e-169 599.7 396 72.7
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 1.0e-168 597.0 328 82.6
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.8e-168 596.3 322 82.0
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 2.6e-167 592.4 320 84.7
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 2.6e-167 592.4 324 82.1
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 3.3e-167 592.0 316 84.2
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 4.4e-167 591.7 393 72.3
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 5.7e-167 591.3 313 85.0
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 7.4e-167 590.9 324 81.8
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 1.3e-166 590.1 313 85.0
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 1.3e-166 590.1 313 85.0
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.7e-166 589.7 322 82.6
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 2.8e-166 589.0 331 80.7
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 3.7e-166 588.6 322 80.7
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 4.8e-166 588.2 320 82.8
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 4.8e-166 588.2 361 77.6
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 6.3e-166 587.8 334 80.2
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.4e-165 586.6 351 76.9
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 2.4e-165 585.9 317 84.2
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 2.4e-165 585.9 375 73.3
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 5.0e-163 578.2 324 79.6
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 1.5e-162 576.6 345 77.1
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 4.7e-161 571.6 388 70.4
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 8.8e-160 567.4 322 78.9
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 1.8e-157 559.7 350 74.0
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 4.5e-156 555.1 333 77.5
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 9.4e-154 547.4 293 82.9
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 4.0e-152 542.0 330 76.4
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.8e-150 535.0 284 83.5
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 1.1e-149 533.9 328 73.8
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 2.5e-146 522.7 321 72.3
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.0e-144 517.3 283 81.6
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.4e-144 516.9 310 74.2
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.5e-143 513.5 320 69.7
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 4.4e-143 511.9 328 72.3
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 2.8e-142 509.2 643 47.0
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.4e-141 506.9 314 71.0
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 4.3e-130 468.8 316 66.8
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 8.6e-123 444.5 248 80.6
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 4.6e-108 395.6 273 70.3
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 7.6e-103 378.3 229 77.3
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 1.1e-101 374.4 229 76.9
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 7.1e-101 371.7 282 63.5
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.9e-90 337.0 350 45.7
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.6e-84 317.4 315 47.3
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.8e-83 313.9 366 42.6
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.8e-83 313.9 316 47.2
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 8.4e-78 295.0 166 82.5
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.2e-57 227.3 122 82.0
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 3.7e-57 226.5 182 59.3
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 6.9e-56 222.2 331 38.7
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.2e-55 221.5 163 65.0
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 2.2e-49 200.7 155 64.5
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.0e-46 191.8 204 51.0
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 8.5e-46 188.7 196 44.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 9.1e-32 142.1 84 72.6
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.5e-21 108.2 67 70.1
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 9.2e-16 89.0 79 51.9
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 3.6e-12 77.0 62 59.7
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 1.2e-10 72.0 39 69.2
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 3.7e-09 67.0 69 50.7
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 9.2e-08 62.4 34 73.5
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 3.5e-07 60.5 31 77.4
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 1.7e-06 58.2 147 25.9
Migut.M01182 Erythranthe guttata HOM05D000363 ORTHO05D000236 6.6e-06 56.2 113 33.6


User provided reference genes

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