Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 2.2e-116 422.2 197 100.0
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 1.5e-56 223.4 104 99.0
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 3.0e-52 209.1 104 91.3
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 4.0e-49 198.7 104 82.7
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 5.3e-49 198.4 104 83.7
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 9.0e-49 197.6 104 83.7
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 1.2e-48 197.2 104 85.6
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.5e-48 196.8 104 80.8
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.5e-48 196.8 104 80.8
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 3.4e-48 195.7 103 82.5
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 4.5e-48 195.3 104 82.7
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 7.6e-48 194.5 123 70.7
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 7.6e-48 194.5 104 81.7
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 1.0e-47 194.1 104 80.8
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.2e-47 193.0 104 79.8
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 2.9e-47 192.6 104 82.7
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 3.8e-47 192.2 104 79.8
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 3.8e-47 192.2 104 82.7
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 4.9e-47 191.8 104 81.7
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 4.9e-47 191.8 104 81.7
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 6.5e-47 191.4 104 81.7
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 6.5e-47 191.4 104 81.7
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 1.9e-46 189.9 104 79.8
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 1.9e-46 189.9 104 80.8
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 3.2e-46 189.1 104 78.8
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 3.2e-46 189.1 100 84.0
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 3.2e-46 189.1 100 84.0
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 7.1e-46 188.0 104 81.7
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 1.6e-45 186.8 104 78.8
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 1.6e-45 186.8 104 77.9
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 1.6e-45 186.8 105 82.9
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 2.7e-45 186.0 104 78.8
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 2.7e-45 186.0 104 77.9
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 3.5e-45 185.7 104 79.8
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 3.5e-45 185.7 104 78.8
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 3.5e-45 185.7 104 79.8
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 3.5e-45 185.7 105 81.0
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 7.9e-45 184.5 104 78.8
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 1.3e-44 183.7 104 77.9
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 1.3e-44 183.7 100 80.0
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 1.8e-44 183.3 104 76.9
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 3.0e-44 182.6 104 75.0
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 3.9e-44 182.2 104 74.0
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 3.9e-44 182.2 101 79.2
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 3.9e-44 182.2 128 64.1
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 5.1e-44 181.8 104 74.0
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 6.7e-44 181.4 104 76.0
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 1.5e-43 180.3 101 79.2
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 1.5e-43 180.3 100 80.0
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 1.9e-43 179.9 104 74.0
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 1.9e-43 179.9 104 74.0
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 2.5e-43 179.5 104 75.0
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 3.3e-43 179.1 105 76.2
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 5.7e-43 178.3 104 73.1
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 9.6e-43 177.6 104 75.0
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 9.6e-43 177.6 105 74.3
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 9.6e-43 177.6 104 76.9
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 9.6e-43 177.6 101 78.2
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 2.1e-42 176.4 100 78.0
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 2.8e-42 176.0 92 83.7
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 2.8e-42 176.0 100 78.0
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 2.8e-42 176.0 104 76.0
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 4.8e-42 175.3 97 79.4
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 4.8e-42 175.3 104 76.9
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 4.8e-42 175.3 104 76.9
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 4.8e-42 175.3 92 82.6
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 8.2e-42 174.5 104 73.1
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 8.2e-42 174.5 92 82.6
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 8.2e-42 174.5 104 73.1
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 8.2e-42 174.5 104 75.0
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 1.1e-41 174.1 104 76.9
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 1.1e-41 174.1 100 78.0
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 2.4e-41 172.9 92 80.4
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.4e-41 172.9 92 80.4
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.4e-41 172.9 92 80.4
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 2.4e-41 172.9 100 80.0
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 4.0e-41 172.2 97 80.4
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 5.3e-41 171.8 91 83.5
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 5.3e-41 171.8 92 79.3
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 6.9e-41 171.4 104 76.0
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 9.0e-41 171.0 104 73.1
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 9.0e-41 171.0 104 76.0
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 1.5e-40 170.2 99 73.7
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.0e-40 169.9 92 79.3
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.0e-40 169.9 92 79.3
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 2.0e-40 169.9 100 75.0
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 2.6e-40 169.5 104 70.2
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 3.4e-40 169.1 104 75.0
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 4.5e-40 168.7 105 70.5
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 4.5e-40 168.7 104 75.0
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.8e-40 168.3 92 78.3
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 7.6e-40 167.9 104 74.0
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 7.6e-40 167.9 101 74.3
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 7.6e-40 167.9 101 74.3
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 5.0e-39 165.2 106 72.6
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 5.0e-39 165.2 106 72.6
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 6.5e-39 164.9 106 73.6
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 8.4e-39 164.5 105 73.3
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 8.4e-39 164.5 101 71.3
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 1.4e-38 163.7 105 72.4
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 1.4e-38 163.7 105 72.4
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 1.4e-38 163.7 105 72.4
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 2.5e-38 162.9 105 72.4
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 3.2e-38 162.5 105 72.4
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 1.6e-37 160.2 105 72.4
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 2.1e-37 159.8 105 71.4
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 2.3e-36 156.4 96 72.9
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 6.7e-36 154.8 103 65.0
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 3.7e-34 149.1 104 67.3
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 8.2e-34 147.9 104 67.3
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 5.3e-33 145.2 114 63.2
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 9.0e-33 144.4 92 69.6
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 1.3e-31 140.6 94 67.0
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 1.3e-31 140.6 94 67.0
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 2.9e-31 139.4 67 92.5
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 1.6e-29 133.7 104 60.6
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 1.8e-25 120.2 97 54.6
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 4.1e-25 119.0 64 82.8
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 1.2e-24 117.5 55 94.5
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 2.6e-24 116.3 89 57.3
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.9e-23 112.8 82 59.8
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 6.5e-23 111.7 92 55.4
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.0e-20 104.4 58 79.3
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 1.4e-20 104.0 56 85.7
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 3.9e-20 102.4 64 75.0
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 4.1e-17 92.4 60 71.7
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 1.1e-09 67.8 37 78.4
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 1.0e-07 61.2 44 54.5


User provided reference genes

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