Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 8.1e-194 680.2 347 100.0
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 7.9e-141 504.2 336 79.5
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 2.6e-128 462.6 336 72.9
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 3.6e-117 425.6 271 83.0
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.4e-105 387.1 337 61.4
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 1.6e-104 383.6 337 60.8
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 4.2e-102 375.6 337 60.2
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 4.4e-99 365.5 337 59.6
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 3.7e-98 362.5 337 59.3
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 6.3e-98 361.7 359 57.7
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 3.2e-97 359.4 342 57.0
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 7.0e-97 358.2 337 58.5
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 4.5e-96 355.5 341 56.9
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 5.9e-96 355.1 347 56.8
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 1.0e-95 354.4 337 57.3
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.3e-95 354.0 341 56.6
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 3.9e-95 352.4 338 57.4
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 5.0e-95 352.1 341 56.3
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 1.1e-94 350.9 347 56.5
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 9.5e-94 347.8 343 56.0
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 1.6e-93 347.1 338 57.7
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 1.6e-93 347.1 337 57.0
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 2.1e-93 346.7 339 57.8
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 2.1e-93 346.7 337 57.6
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 1.0e-92 344.4 337 56.7
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.3e-92 343.2 337 56.1
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 3.1e-92 342.8 339 56.9
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 4.0e-92 342.4 337 55.8
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 4.0e-92 342.4 360 54.7
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 6.8e-92 341.7 337 54.9
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 2.6e-91 339.7 338 54.4
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 7.5e-91 338.2 337 55.2
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 9.8e-91 337.8 337 55.2
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 1.3e-90 337.4 337 54.9
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 1.3e-90 337.4 337 55.2
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.3e-90 337.4 337 55.2
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 1.3e-90 337.4 336 56.0
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.2e-90 336.7 337 55.2
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 3.2e-89 332.8 337 55.2
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 5.4e-89 332.0 337 54.6
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 7.8e-88 328.2 339 54.3
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 3.9e-87 325.9 339 53.7
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 3.9e-87 325.9 341 54.8
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 5.0e-87 325.5 337 53.7
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 8.6e-87 324.7 339 53.4
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 1.5e-86 323.9 339 55.2
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 3.3e-86 322.8 349 53.3
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 1.2e-85 320.9 338 52.1
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 1.2e-85 320.9 347 54.2
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 1.6e-85 320.5 337 53.1
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 6.2e-85 318.5 337 53.7
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 1.8e-84 317.0 337 52.5
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 2.3e-84 316.6 343 52.2
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 3.4e-83 312.8 339 53.7
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 4.9e-82 308.9 344 51.2
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 1.1e-81 307.8 339 51.0
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.7e-80 303.1 336 50.9
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 2.7e-80 303.1 336 50.6
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 1.3e-79 300.8 347 50.4
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 1.3e-79 300.8 347 49.3
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 3.0e-79 299.7 373 48.3
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 5.1e-79 298.9 338 50.6
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 1.9e-78 297.0 347 50.1
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 9.5e-78 294.7 336 49.4
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 3.6e-77 292.7 348 51.4
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 6.2e-77 292.0 340 49.7
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 1.1e-76 291.2 344 48.5
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 1.1e-76 291.2 340 51.5
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 2.3e-76 290.0 338 49.4
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 2.3e-76 290.0 344 49.1
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 1.5e-75 287.3 347 49.9
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 2.6e-75 286.6 341 49.6
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 3.4e-75 286.2 339 50.7
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 7.6e-75 285.0 339 48.1
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 1.7e-74 283.9 343 49.9
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 2.2e-74 283.5 336 47.9
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 4.1e-73 279.3 347 46.1
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.6e-72 277.3 340 47.1
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 2.1e-72 276.9 340 47.9
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 2.3e-71 273.5 351 47.3
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 2.3e-71 273.5 349 46.4
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 4.3e-70 269.2 341 47.5
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 5.6e-70 268.9 340 47.9
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 7.3e-70 268.5 341 47.8
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 7.3e-70 268.5 341 47.5
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 1.2e-69 267.7 341 47.5
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 2.8e-69 266.5 339 45.7
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 4.7e-69 265.8 353 45.0
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 2.4e-68 263.5 340 47.6
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 3.1e-68 263.1 340 47.4
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 8.9e-68 261.5 341 46.6
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 1.2e-67 261.2 234 62.0
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.5e-67 260.8 353 45.3
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 3.4e-67 259.6 340 47.4
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 4.4e-67 259.2 340 47.1
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 4.4e-67 259.2 341 46.3
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 1.7e-66 257.3 345 44.9
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.9e-66 256.5 308 48.4
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 1.1e-65 254.6 337 44.8
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 1.4e-65 254.2 340 46.5
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.4e-65 254.2 321 46.4
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 3.2e-65 253.1 340 45.9
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 6.0e-64 248.8 340 46.8
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 3.3e-62 243.0 385 42.1
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 9.6e-62 241.5 234 56.4
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.0e-59 233.8 240 55.0
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 4.9e-58 229.2 341 43.7
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 1.4e-57 227.6 348 42.8
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 6.6e-55 218.8 231 52.8
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 2.2e-50 203.8 223 52.5
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 6.0e-48 195.7 330 40.3
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 1.1e-46 191.4 273 41.4
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 4.3e-46 189.5 217 52.5
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 9.6e-46 188.3 231 48.9
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 3.8e-42 176.4 308 39.6
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 2.4e-36 157.1 278 36.7
Sed0023875 Sechium edule HOM05D004567 ORTHO05D005726 5.0e-26 122.9 297 34.0
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 2.7e-24 117.1 355 26.2
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.8e-23 114.4 158 45.6
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 5.1e-23 112.8 232 36.2
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.1e-22 111.7 120 45.8
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 5.7e-22 109.4 372 25.3
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 1.3e-21 108.2 87 63.2
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 3.7e-21 106.7 85 63.5
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 6.3e-21 105.9 367 25.9
Oeu029994.1 Olea europaea HOM05D004567 ORTHO05D005726 2.6e-19 100.5 86 55.8
PGSC0003DMG402027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 2.6e-19 100.5 76 57.9
Rhsim04G0129600 Rhododendron simsii HOM05D004567 ORTHO05D005726 3.4e-19 100.1 120 45.0
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 4.5e-19 99.8 343 25.9
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 1.1e-17 95.1 350 26.9
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 4.2e-17 93.2 64 65.6
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 8.2e-13 79.0 57 61.4
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 4.1e-12 76.6 47 72.3
SEGI_29421 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 5.2e-07 59.7 76 38.2
FvH4_7g08791 Fragaria vesca HOM05D004567 ORTHO05D045614 2.6e-06 57.4 44 65.9


User provided reference genes

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