Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 1.5e-280 968.8 467 100.0
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.1e-266 921.8 467 94.4
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 9.9e-264 912.9 467 93.8
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 2.0e-227 792.3 469 80.2
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 3.7e-226 788.1 468 79.9
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 5.3e-217 757.7 486 76.1
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 2.2e-215 752.3 471 76.0
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 5.5e-214 747.7 467 76.0
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 7.2e-214 747.3 468 75.6
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 1.2e-213 746.5 475 75.4
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.2e-213 746.5 468 75.6
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 2.7e-213 745.3 468 75.4
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 2.7e-213 745.3 471 76.4
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 4.7e-213 744.6 468 75.4
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 1.0e-212 743.4 470 76.2
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.4e-212 743.0 471 76.0
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 1.8e-212 742.7 471 76.2
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 2.3e-212 742.3 462 75.3
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 3.4e-211 738.4 467 75.4
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.7e-210 736.1 476 75.4
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 1.7e-210 736.1 470 74.5
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 5.4e-209 731.1 468 73.9
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 6.6e-207 724.2 479 71.6
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 2.1e-205 719.2 459 73.9
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.0e-204 716.8 458 73.8
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 5.2e-204 714.5 364 92.0
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 2.0e-203 712.6 475 72.0
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 2.0e-203 712.6 431 77.5
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 3.4e-203 711.8 479 72.9
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 3.7e-202 708.4 471 71.5
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 8.0e-197 690.6 470 70.9
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 1.0e-196 690.3 464 69.8
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 1.0e-196 690.3 468 69.9
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 1.0e-196 690.3 468 71.6
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 4.0e-196 688.3 458 71.4
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 6.8e-196 687.6 464 70.3
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 6.8e-196 687.6 430 73.7
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 8.9e-196 687.2 473 70.8
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 1.3e-194 683.3 467 69.8
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 2.2e-194 682.6 471 69.9
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 2.9e-194 682.2 471 70.1
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 3.7e-194 681.8 436 73.6
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 3.2e-193 678.7 471 70.3
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.2e-192 676.8 463 69.3
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 2.0e-192 676.0 467 71.9
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 2.7e-192 675.6 437 73.0
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.0e-191 673.7 469 71.4
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 1.3e-191 673.3 462 70.8
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 1.7e-191 672.9 427 75.6
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 3.0e-191 672.2 469 71.2
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 3.0e-191 672.2 469 71.2
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 5.0e-191 671.4 468 69.0
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 6.6e-191 671.0 469 71.4
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 6.6e-191 671.0 468 69.7
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.1e-190 670.2 448 71.9
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 1.9e-190 669.5 463 69.5
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 1.9e-190 669.5 440 71.1
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 2.5e-190 669.1 461 69.6
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 7.3e-190 667.5 366 84.4
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 2.1e-189 666.0 447 69.4
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 4.7e-189 664.8 459 69.1
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 2.3e-188 662.5 459 68.8
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 5.2e-188 661.4 447 70.0
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 5.8e-187 657.9 459 68.4
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 7.5e-187 657.5 466 68.2
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.7e-186 656.4 501 64.7
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 6.4e-186 654.4 500 67.0
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 1.1e-185 653.7 417 74.6
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.9e-185 652.9 390 78.5
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.9e-185 652.9 474 66.2
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 3.2e-185 652.1 417 74.3
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 5.4e-185 651.4 428 69.9
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 9.2e-185 650.6 461 67.7
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 1.7e-183 646.4 474 67.1
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 3.0e-183 645.6 450 69.8
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 1.9e-182 642.9 440 69.5
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.9e-182 642.9 437 69.8
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 8.3e-178 627.5 387 73.6
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.6e-176 623.2 385 75.8
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 1.0e-175 620.5 390 74.4
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.3e-175 620.2 451 66.3
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.7e-175 619.8 394 74.1
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 9.6e-174 614.0 467 66.8
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 2.1e-173 612.8 476 64.9
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 2.0e-171 606.3 431 65.7
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 1.4e-169 600.1 431 65.2
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 3.2e-169 599.0 443 65.7
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 1.6e-165 586.6 440 63.9
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 2.4e-161 572.8 333 80.8
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 3.3e-158 562.4 433 62.6
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 4.3e-158 562.0 446 61.4
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 6.2e-157 558.1 432 61.1
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 1.2e-155 553.9 442 60.4
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 2.7e-144 516.2 455 56.9
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 2.0e-139 500.0 378 61.9
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 3.7e-133 479.2 485 53.2
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.7e-112 409.1 307 64.8
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 4.1e-108 396.0 212 86.8
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 2.9e-98 363.2 226 77.4
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 3.8e-98 362.8 270 67.4
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 3.8e-98 362.8 259 71.4
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 8.5e-98 361.7 381 46.2
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 1.4e-95 354.4 455 42.0
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 5.6e-89 332.4 437 41.4
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 3.1e-79 300.1 321 51.7
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 1.2e-67 261.5 159 75.5
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 1.0e-66 258.5 272 49.3
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 2.1e-64 250.8 155 77.4
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 2.7e-59 233.8 256 51.6
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.3e-40 171.8 128 61.7
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.8e-34 151.4 130 60.0
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.9e-33 147.9 81 90.1
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 2.5e-28 131.0 133 53.4
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 3.9e-26 123.6 75 74.7
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 6.3e-24 116.3 67 77.6
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 7.9e-19 99.4 75 64.0
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 1.8e-18 98.2 108 56.5
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 3.0e-18 97.4 84 51.2
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 1.1e-17 95.5 133 44.4


User provided reference genes

Program Settings