Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G006640 Citrullus lanatus HOM05D014232 ORTHO05D000006 5.8e-112 407.5 201 100.0
ClCG06G010890 Citrullus lanatus HOM05D014232 ORTHO05D001339 1.1e-57 227.3 201 60.7
CsaV3_2G034750 Cucumis sativus L. HOM05D000003 ORTHO05D000006 5.2e-36 155.2 132 53.8
ClCG04G002540 Citrullus lanatus HOM05D014232 ORTHO05D000006 5.8e-35 151.8 187 48.1
ClCG00G005620 Citrullus lanatus HOM05D014232 ORTHO05D001339 2.2e-26 123.2 197 44.7
ClCG06G011820 Citrullus lanatus HOM05D014232 ORTHO05D001339 2.2e-26 123.2 197 44.7
ClCG05G007310 Citrullus lanatus HOM05D000003 ORTHO05D000006 1.1e-22 110.9 131 41.2
CsaV3_7G023430 Cucumis sativus L. HOM05D000003 ORTHO05D000006 1.2e-21 107.5 120 40.8
ClCG06G011290 Citrullus lanatus HOM05D000003 ORTHO05D000006 3.6e-21 105.9 87 63.2
ClCG10G007440 Citrullus lanatus HOM05D000003 ORTHO05D000004 4.2e-17 92.4 130 34.6
CiPaw.14G112600 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.1e-17 91.7 131 32.1
CiPaw.02G057800 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-16 90.9 134 36.6
PSO017G6159 Papaver somniferum HOM05D000003 ORTHO05D000006 1.0e-15 87.8 132 31.1
Hund22684 Selenicereus undatus HOM05D001165 ORTHO05D000006 1.3e-15 87.4 130 32.3
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.7e-15 87.0 129 33.3
CiPaw.06G024700 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.3e-15 86.7 133 30.8
CiPaw.01G094800 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.0e-15 86.3 133 32.3
CiPaw.01G225900 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.0e-15 86.3 130 31.5
ClCG04G012890 Citrullus lanatus HOM05D000003 ORTHO05D000004 3.0e-15 86.3 129 33.3
Sed0026271 Sechium edule HOM05D000003 ORTHO05D000006 3.9e-15 85.9 167 33.5
CiPaw.06G060200 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-15 85.5 134 32.8
CiPaw.07G008100 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-15 85.5 133 32.3
CiPaw.13G122400 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-15 85.5 130 30.8
PSO017G5264 Papaver somniferum HOM05D000003 ORTHO05D000006 8.7e-15 84.7 133 33.8
PSO541G0836 Papaver somniferum HOM05D000003 ORTHO05D000006 8.7e-15 84.7 133 34.6
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.5e-14 84.0 130 30.0
CiPaw.06G163400 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.5e-14 84.0 130 30.8
CiPaw.01G208000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.9e-14 83.6 130 31.5
PSO017G1919 Papaver somniferum HOM05D000003 ORTHO05D000006 1.9e-14 83.6 138 30.4
Hund10465 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.9e-14 83.6 132 36.4
PSO210G5338 Papaver somniferum HOM05D000003 ORTHO05D000006 2.5e-14 83.2 133 33.8
CANSAT11G2262 Cannabis sativa HOM05D000003 ORTHO05D000006 3.3e-14 82.8 129 36.4
CiPaw.05G158600 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.3e-14 82.8 130 31.5
ClCG04G003380 Citrullus lanatus HOM05D009184 ORTHO05D000006 3.3e-14 82.8 115 33.0
CiPaw.03G101600 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.6e-14 82.0 131 33.6
PSO356G0004 Papaver somniferum HOM05D000003 ORTHO05D000006 7.3e-14 81.6 133 30.8
CiPaw.06G165800 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.6e-14 81.3 134 29.9
CiPaw.12G029100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-13 80.9 131 31.3
CiPaw.15G041600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-13 80.5 133 32.3
CiPaw.01G031000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.1e-13 80.1 133 32.3
CiPaw.11G178800 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.1e-13 80.1 131 30.5
CiPaw.03G074300 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.8e-13 79.7 133 30.1
Cpa.g.sc25.167 Carica papaya HOM05D000230 ORTHO05D000176 6.2e-13 78.6 129 28.7
CiPaw.16G055100 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.1e-13 78.2 135 28.9
CiPaw.11G119300 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.4e-12 77.4 130 29.2
PSO339G1341 Papaver somniferum HOM05D000003 ORTHO05D000006 3.1e-12 76.3 137 28.5
CiPaw.02G049700 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.0e-12 75.9 116 31.9
PSO302G0175 Papaver somniferum HOM05D000003 ORTHO05D000006 5.3e-12 75.5 129 27.9
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 9.0e-12 74.7 129 31.8
Hund15412 Selenicereus undatus HOM05D000003 ORTHO05D000006 1.2e-11 74.3 132 33.3
CSS0013558 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-11 73.9 132 31.1
ClCG11G005170 Citrullus lanatus HOM05D014232 ORTHO05D000006 1.5e-11 73.9 61 62.3
ClCG07G007140 Citrullus lanatus HOM05D014232 ORTHO05D000006 2.0e-11 73.6 66 60.6
PSO333G0031 Papaver somniferum HOM05D000003 ORTHO05D000006 2.6e-11 73.2 137 28.5
CiPaw.04G081300 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.8e-11 72.0 131 28.2
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 5.8e-11 72.0 97 36.1
PSO017G0133 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-11 72.0 131 31.3
PSO393G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-11 72.0 137 30.7
Hund19901 Selenicereus undatus HOM05D000003 ORTHO05D000006 5.8e-11 72.0 111 29.7
Cpa.g.sc54.17 Carica papaya HOM05D000003 ORTHO05D000006 7.6e-11 71.6 132 31.8
PSO063G1566 Papaver somniferum HOM05D000003 ORTHO05D000006 7.6e-11 71.6 118 34.7
CiPaw.01G000700 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.9e-11 71.2 130 27.7
PSO017G0976 Papaver somniferum HOM05D000003 ORTHO05D000006 9.9e-11 71.2 120 35.0
PSO782G3067 Papaver somniferum HOM05D000003 ORTHO05D000004 9.9e-11 71.2 130 28.5
MBI11_g04612_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.3e-10 70.9 134 31.3
PSO674G0014 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-10 70.9 110 31.8
PSO170G1202 Papaver somniferum HOM05D000003 ORTHO05D000006 1.7e-10 70.5 135 30.4
PSO832G4187 Papaver somniferum HOM05D000003 ORTHO05D000006 1.7e-10 70.5 105 36.2
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.2e-10 70.1 129 28.7
PSO339G5045 Papaver somniferum HOM05D000003 ORTHO05D000006 2.2e-10 70.1 133 28.6
CiPaw.05G121300 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.9e-10 69.7 130 29.2
PSO339G2808 Papaver somniferum HOM05D000003 ORTHO05D000006 2.9e-10 69.7 136 27.2
Hund21125 Selenicereus undatus HOM05D008000 ORTHO05D010275 2.9e-10 69.7 132 30.3
Hund26572 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.8e-10 69.3 132 32.6
CiPaw.09G115400 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.9e-10 68.9 121 27.3
ClCG06G009540 Citrullus lanatus HOM05D000003 ORTHO05D000006 4.9e-10 68.9 121 30.6
PSO384G2183 Papaver somniferum HOM05D000003 ORTHO05D000006 6.4e-10 68.6 133 27.8
PSO541G1122 Papaver somniferum HOM05D000003 ORTHO05D000006 6.4e-10 68.6 116 32.8
PSO170G4394 Papaver somniferum HOM05D000003 ORTHO05D000006 8.4e-10 68.2 128 28.9
Aqoxy3G01977 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.1e-09 67.8 117 29.1
Aqoxy6G03067 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.1e-09 67.8 177 27.7
CiPaw.03G068000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-09 67.8 114 30.7
PSO135G0136 Papaver somniferum HOM05D000003 ORTHO05D000006 1.1e-09 67.8 109 32.1
PSO566G0317 Papaver somniferum HOM05D000003 ORTHO05D000006 1.1e-09 67.8 133 30.8
CiPaw.01G042800 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.4e-09 67.4 104 26.9
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-09 67.4 143 29.4
Aqoxy2G01461 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-09 67.0 118 28.8
PSO210G3828 Papaver somniferum HOM05D000003 ORTHO05D000006 1.9e-09 67.0 105 37.1
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 1.9e-09 67.0 132 31.1
Aqoxy3G01412 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.4e-09 66.6 125 28.8
CiPaw.06G163500 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.4e-09 66.6 117 30.8
CiPaw.14G131400 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.2e-09 66.2 117 31.6
PSO210G4273 Papaver somniferum HOM05D000003 ORTHO05D000006 3.2e-09 66.2 131 29.0
CSS0044299 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.2e-09 65.9 117 33.3
TPR.G40859 Trifolium pratense HOM05D000003 ORTHO05D000004 5.4e-09 65.5 142 28.9
PSO210G5568 Papaver somniferum HOM05D000003 ORTHO05D000006 7.1e-09 65.1 132 28.8
Aqoxy1G02451 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.3e-09 64.7 115 34.8
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.3e-09 64.7 129 29.5
CiPaw.12G035200 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.3e-09 64.7 60 41.7
PSO063G5944 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-08 64.3 128 28.1
PSO513G0078 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-08 64.3 114 28.1
Aqoxy4G00279 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-08 63.9 120 31.7
PSO724G0003 Papaver somniferum HOM05D000003 ORTHO05D000006 1.6e-08 63.9 111 33.3
PSO675G3907 Papaver somniferum HOM05D000003 ORTHO05D000006 2.1e-08 63.5 99 32.3
CiPaw.06G040000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.7e-08 63.2 104 28.8
PSO532G0034 Papaver somniferum HOM05D000003 ORTHO05D000006 2.7e-08 63.2 113 34.5
PSO675G4067 Papaver somniferum HOM05D000003 ORTHO05D000006 2.7e-08 63.2 113 33.6
PSO724G0774 Papaver somniferum HOM05D000003 ORTHO05D000004 2.7e-08 63.2 105 35.2
Sed0007954 Sechium edule HOM05D000003 ORTHO05D000006 3.5e-08 62.8 109 29.4
Aqoxy6G01478 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.6e-08 62.4 133 29.3
CiPaw.01G131400 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.6e-08 62.4 119 29.4
PSO731G0096 Papaver somniferum HOM05D000003 ORTHO05D000006 4.6e-08 62.4 81 38.3
PSO782G0247 Papaver somniferum HOM05D000003 ORTHO05D000004 4.6e-08 62.4 133 27.8
PSO063G4608 Papaver somniferum HOM05D000003 ORTHO05D000006 6.0e-08 62.0 113 31.0
Aqoxy4G01421 Aquilegia oxysepala HOM05D008675 ORTHO05D000006 7.9e-08 61.6 116 30.2
Aqoxy6G02709 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 7.9e-08 61.6 127 28.3
PSO198G0072 Papaver somniferum HOM05D000003 ORTHO05D000006 7.9e-08 61.6 108 31.5
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 7.9e-08 61.6 92 35.9
PSO675G0500 Papaver somniferum HOM05D000003 ORTHO05D000006 1.3e-07 60.8 114 28.1
PSO339G0747 Papaver somniferum HOM05D000003 ORTHO05D000006 1.8e-07 60.5 113 31.9
Aqoxy4G01302 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.3e-07 60.1 129 27.9
Aqoxy4G01058 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.0e-07 59.7 91 30.8
CiPaw.10G022700 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.0e-07 59.7 61 36.1
CSS0004372 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.9e-07 59.3 131 23.7
PSO017G2762 Papaver somniferum HOM05D000003 ORTHO05D000006 3.9e-07 59.3 132 28.0
PSO782G5504 Papaver somniferum HOM05D000003 ORTHO05D000006 5.1e-07 58.9 133 26.3
PGSC0003DMG400028890 Solanum tuberosum HOM05D000003 ORTHO05D000006 5.1e-07 58.9 125 27.2
Aqoxy4G01519 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 6.7e-07 58.5 118 29.7
Aqoxy4G01868 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 8.7e-07 58.2 128 30.5
CSS0018102 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.7e-07 58.2 98 28.6
CiPaw.06G120200 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.7e-07 58.2 61 39.3
PSO455G0059 Papaver somniferum HOM05D000003 ORTHO05D000006 8.7e-07 58.2 97 30.9
Aqoxy2G01709 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.1e-06 57.8 118 28.8
CiPaw.07G117200 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-06 57.8 61 39.3
CiPaw.14G010000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.5e-06 57.4 146 26.0
CsaV3_7G000110 Cucumis sativus L. HOM05D000003 ORTHO05D000006 1.5e-06 57.4 62 38.7
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-06 57.0 127 23.6
Atru.chr2.2596 Acer truncatum HOM05D000003 ORTHO05D000006 1.9e-06 57.0 156 21.2
Aqoxy3G01817 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.9e-06 57.0 111 30.6
PSO675G5677 Papaver somniferum HOM05D000003 ORTHO05D000006 1.9e-06 57.0 79 36.7
Aqoxy7G01789 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.5e-06 56.6 89 33.7
Cpa.g.sc29.11 Carica papaya HOM05D000003 ORTHO05D000006 2.5e-06 56.6 98 32.7
CiPaw.03G233400 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.5e-06 56.6 126 24.6
ECA238G3311 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.3e-06 56.2 86 31.4
PSO210G1762 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-06 56.2 75 38.7
CiPaw.08G109000 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.3e-06 55.8 61 37.7
PSO063G4661 Papaver somniferum HOM05D000003 ORTHO05D000006 4.3e-06 55.8 83 33.7
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 55.5 132 26.5
Cpa.g.sc846.1 Carica papaya HOM05D000003 ORTHO05D000006 5.6e-06 55.5 116 27.6
ClCG08G009300 Citrullus lanatus HOM05D000003 ORTHO05D000006 5.6e-06 55.5 61 42.6
EL10Ac7g16951 Beta vulgaris HOM05D000003 ORTHO05D000006 7.4e-06 55.1 130 30.0
Cpa.g.c41853.2 Carica papaya HOM05D012693 ORTHO05D000006 7.4e-06 55.1 101 25.7
CiPaw.03G231100 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.4e-06 55.1 61 34.4
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 7.4e-06 55.1 179 27.4
Thecc.09G168100 Theobroma cacao HOM05D000003 ORTHO05D000006 7.4e-06 55.1 166 24.1
CiPaw.01G183000 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.6e-06 54.7 61 37.7
MELO3C022264.2 Cucumis melo HOM05D000003 ORTHO05D000004 9.6e-06 54.7 59 42.4
Psat2g001200 Pisum sativum HOM05D007807 ORTHO05D000006 9.6e-06 54.7 136 27.2


User provided reference genes

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