Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G005570 Citrullus lanatus HOM05D004411 ORTHO05D005569 0.0e+00 1103.6 581 100.0
CsaV3_3G017510 Cucumis sativus L. HOM05D004411 ORTHO05D005569 1.3e-167 594.0 394 82.2
MELO3C003591.2 Cucumis melo HOM05D004411 ORTHO05D005569 5.3e-166 588.6 388 83.8
Sed0027425 Sechium edule HOM05D004411 ORTHO05D005569 1.3e-151 540.8 386 77.5
Ciclev10008629m.g Citrus clementina HOM05D004411 ORTHO05D005569 6.9e-97 359.0 381 55.4
QL08p012116 Quercus lobata HOM05D004411 ORTHO05D005569 6.4e-95 352.4 412 52.9
Hma1.2p1_0938F.1_g239200 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 1.1e-94 351.7 383 51.4
CiPaw.05G090700 Carya illinoinensis HOM05D004411 ORTHO05D005569 9.3e-94 348.6 405 53.3
QL08p011929 Quercus lobata HOM05D004411 ORTHO05D005569 2.1e-93 347.4 413 52.1
Dinv22283 Davidia involucrata HOM05D004411 ORTHO05D005569 2.7e-93 347.1 387 53.2
GSVIVG01008286001 Vitis vinifera HOM05D004411 ORTHO05D005569 6.0e-93 345.9 381 53.3
Prupe.4G208500 Prunus persica HOM05D004411 ORTHO05D005569 1.0e-92 345.1 386 55.4
Atru.chr2.3274 Acer truncatum HOM05D004411 ORTHO05D005569 3.9e-92 343.2 413 51.6
Rhsim04G0001700 Rhododendron simsii HOM05D004411 ORTHO05D005569 3.3e-91 340.1 397 50.4
vmacro09736 Vaccinium macrocarpon HOM05D004411 ORTHO05D005569 3.7e-90 336.7 414 49.0
CANSAT56G2724 Cannabis sativa HOM05D004411 ORTHO05D005569 1.1e-89 335.1 389 54.0
TWI38G0098 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 4.0e-89 333.2 400 50.8
RcHm_v2.0_Chr5g0037971 Rosa chinensis HOM05D004411 ORTHO05D005569 6.9e-89 332.4 384 53.6
Rhsim04G0000600 Rhododendron simsii HOM05D004411 ORTHO05D005569 2.0e-88 330.9 410 48.8
CSS0013783 Camellia sinensis var. sinensis HOM05D004411 ORTHO05D005569 1.3e-87 328.2 385 51.7
Dinv40733 Davidia involucrata HOM05D004411 ORTHO05D005569 4.9e-87 326.2 362 53.6
FvH4_3g22120 Fragaria vesca HOM05D004411 ORTHO05D005569 3.5e-85 320.1 384 51.8
CAN.G337.104 Capsicum annuum HOM05D004411 ORTHO05D005569 7.9e-85 318.9 382 48.2
Eucgr.E01365 Eucalyptus grandis HOM05D004411 ORTHO05D005569 1.8e-84 317.8 389 49.4
Potri.011G136400 Populus trichocarpa HOM05D004411 ORTHO05D005569 5.1e-84 316.2 399 48.6
Actinidia35328 Actinidia chinensis HOM05D004411 ORTHO05D005569 6.7e-84 315.8 391 48.3
Duzib213G0043 Durio zibethinus HOM05D004411 ORTHO05D005569 1.5e-83 314.7 398 49.2
TAR627G0926 Trochodendron aralioides HOM05D004411 ORTHO05D005569 3.3e-83 313.5 396 48.2
Thecc.07G044400 Theobroma cacao HOM05D004411 ORTHO05D005569 5.7e-83 312.8 393 50.4
Medtr3g019330 Medicago truncatula HOM05D004411 ORTHO05D005569 7.4e-83 312.4 410 47.6
Solyc07g064300.3 Solanum lycopersicum HOM05D004411 ORTHO05D005569 9.7e-83 312.0 388 48.2
Cc02_g24710 Coffea canephora HOM05D004411 ORTHO05D005569 2.2e-82 310.8 386 49.0
ECA236G1785 Erigeron canadensis HOM05D004411 ORTHO05D005569 2.8e-82 310.5 380 51.1
MD11G1222400 Malus domestica HOM05D004411 ORTHO05D005569 4.8e-82 309.7 355 54.1
PGR083G2632 Punica granatum HOM05D004411 ORTHO05D005569 4.8e-82 309.7 384 47.4
Sc06g0005160 Simmondsia chinensis HOM05D004411 ORTHO05D005569 7.7e-80 302.4 344 52.0
Peaxi162Scf00450g00868 Petunia axillaris HOM05D004411 ORTHO05D005569 5.0e-79 299.7 385 46.5
Sabra11G0122500 Salix brachista HOM05D004411 ORTHO05D005569 2.5e-78 297.4 415 47.2
THA.LOC104798777 Tarenaya hassleriana HOM05D004411 ORTHO05D005569 2.5e-78 297.4 389 46.3
TWI38G2195 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 2.5e-78 297.4 274 60.9
Hund07317 Selenicereus undatus HOM05D004411 ORTHO05D005569 9.4e-78 295.4 395 46.8
Ca_24447_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 2.7e-77 293.9 416 44.7
Ca_05663_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 3.6e-77 293.5 405 44.7
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.6e-77 293.5 404 49.3
Gorai.002G085400 Gossypium raimondii HOM05D004411 ORTHO05D005569 1.0e-76 292.0 394 46.7
Glyma.08G313000 Glycine max HOM05D004411 ORTHO05D005569 1.4e-76 291.6 346 50.6
Gohir.D01G064500 Gossypium hirsutum HOM05D004411 ORTHO05D005569 1.8e-76 291.2 403 46.2
Nitab4.5_0009551g0010 Nicotiana tabacum HOM05D004411 ORTHO05D005569 1.8e-76 291.2 413 43.8
Lj6g0013350 Lotus japonicus HOM05D004411 ORTHO05D005569 2.3e-76 290.8 343 51.0
Lalb_Chr18g0049751 Lupinus albus HOM05D004411 ORTHO05D005569 3.0e-76 290.4 341 49.9
RcHm_v2.0_Chr1g0330851 Rosa chinensis HOM05D004411 ORTHO05D005569 1.1e-75 288.5 213 69.5
Atru.chr7.1306 Acer truncatum HOM05D004411 ORTHO05D005569 1.5e-75 288.1 262 61.1
Psat5g216880 Pisum sativum HOM05D004411 ORTHO05D005569 2.0e-75 287.7 407 46.4
Gohir.A01G077000 Gossypium hirsutum HOM05D004411 ORTHO05D005569 3.3e-75 287.0 393 46.8
EL10Ac9g22002 Beta vulgaris HOM05D004411 ORTHO05D005569 1.3e-74 285.0 398 47.0
Phvul.006G038300 Phaseolus vulgaris HOM05D004411 ORTHO05D005569 3.7e-74 283.5 349 51.0
arahy.Tifrunner.gnm1.ann1.01DGNM Arachis hypogaea HOM05D004411 ORTHO05D005569 4.8e-74 283.1 255 58.0
HanXRQChr11g0336281 Helianthus annuus HOM05D004411 ORTHO05D005569 4.8e-74 283.1 375 46.1
TPR.G3855 Trifolium pratense HOM05D004411 ORTHO05D005569 8.2e-74 282.3 441 45.1
Migut.H01843 Erythranthe guttata HOM05D004411 ORTHO05D005569 2.4e-73 280.8 397 43.6
MSTRG.12964 Avicennia marina HOM05D004411 ORTHO05D005569 2.0e-72 277.7 404 42.6
PSO210G7535 Papaver somniferum HOM05D004411 ORTHO05D005569 1.3e-71 275.0 392 43.9
CiPaw.11G186800 Carya illinoinensis HOM05D004411 ORTHO05D005569 2.9e-71 273.9 219 68.0
arahy.Tifrunner.gnm1.ann1.7KL5HB Arachis hypogaea HOM05D004411 ORTHO05D005569 5.0e-71 273.1 368 44.6
Medtr4g088440 Medicago truncatula HOM05D004411 ORTHO05D005569 6.5e-71 272.7 237 60.3
SalBow7G1998 Salvia bowleyana HOM05D004411 ORTHO05D005569 1.4e-70 271.6 416 42.3
PSO210G6597 Papaver somniferum HOM05D004411 ORTHO05D005569 3.2e-70 270.4 395 43.5
Aa31LG10G3320 Aethionema arabicum HOM05D004411 ORTHO05D005569 6.1e-69 266.2 386 44.6
Lsat_1_v5_gn_7_109101 Lactuca sativa HOM05D004411 ORTHO05D005569 1.4e-68 265.0 340 48.8
TAR624G0740 Trochodendron aralioides HOM05D004411 ORTHO05D005569 1.4e-68 265.0 347 48.7
Glyma.08G318600 Glycine max HOM05D004411 ORTHO05D005569 5.1e-68 263.1 246 58.1
Lj2g0018498 Lotus japonicus HOM05D004411 ORTHO05D005569 5.1e-68 263.1 255 57.3
Thhalv10011488m.g Eutrema salsugineum HOM05D004411 ORTHO05D005569 3.3e-67 260.4 440 42.3
FAN21G4008 Fragaria x ananassa HOM05D004411 ORTHO05D005569 4.4e-67 260.0 402 45.3
Oeu021397.1 Olea europaea HOM05D004411 ORTHO05D005569 5.7e-67 259.6 362 42.5
Oeu005458.1 Olea europaea HOM05D004411 ORTHO05D005569 9.7e-67 258.8 415 41.7
AL1G58640 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 1.7e-66 258.1 315 49.5
SGA_v2.0_scaffold9G05058 Striga asiatica HOM05D004411 ORTHO05D005569 4.8e-66 256.5 431 38.7
AT1G50910 Arabidopsis thaliana HOM05D004411 ORTHO05D005569 1.1e-65 255.4 318 49.4
CARHR040960 Cardamine hirsuta HOM05D004411 ORTHO05D005569 1.4e-65 255.0 316 50.0
AUR62000402 Chenopodium quinoa HOM05D004411 ORTHO05D005569 1.8e-65 254.6 388 43.8
DCAR_008678 Daucus carota HOM05D004411 ORTHO05D005569 2.4e-65 254.2 379 44.1
Carub.0001s3986 Capsella rubella HOM05D004411 ORTHO05D005569 3.5e-64 250.4 331 47.1
Sp1g37650 Schrenkiella parvula HOM05D004411 ORTHO05D005569 8.5e-63 245.7 370 44.3
PGSC0003DMG402013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 1.6e-61 241.5 388 39.9
Aqoxy3G00168 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 1.5e-59 235.0 394 40.4
BcaB07g33532 Brassica carinata HOM05D004411 ORTHO05D005569 9.7e-59 232.3 254 53.9
unitig_0.g2388 Utricularia gibba HOM05D004411 ORTHO05D005569 9.7e-59 232.3 370 40.0
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.3e-58 231.9 429 41.0
BcaC08g43264 Brassica carinata HOM05D004411 ORTHO05D005569 1.7e-58 231.5 254 53.1
C06p06080 Brassica napus HOM05D004411 ORTHO05D005569 1.7e-58 231.5 254 53.1
BolC6t35721H Brassica oleracea HOM05D004411 ORTHO05D005569 1.7e-58 231.5 254 53.1
Manes.03G127300 Manihot esculenta HOM05D004411 ORTHO05D005569 2.8e-58 230.7 375 41.3
Lalb_Chr15g0080391 Lupinus albus HOM05D004411 ORTHO05D005569 1.1e-57 228.8 193 63.7
A06p02820 Brassica napus HOM05D004411 ORTHO05D005569 1.8e-57 228.0 332 45.2
BraA06t23489Z Brassica rapa HOM05D004411 ORTHO05D005569 3.1e-57 227.3 248 54.0
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.6e-56 224.9 372 42.7
Cpa.g.sc12.166 Carica papaya HOM05D004411 ORTHO05D005569 1.7e-55 221.5 387 40.3
SHI31835 Sapria himalayana HOM05D004411 ORTHO05D005569 1.7e-55 221.5 249 51.4
Aqoxy7G03937 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 3.2e-54 217.2 388 39.4
Nitab4.5_0000397g0320 Nicotiana tabacum HOM05D004411 ORTHO05D005569 1.6e-53 214.9 419 35.6
AL8G37460 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 8.0e-53 212.6 316 44.6
AL2G19790 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 4.0e-52 210.3 185 62.2
AUR62006758 Chenopodium quinoa HOM05D004411 ORTHO05D005569 5.2e-52 209.9 406 39.7
ATR0564G530 Amborella trichopoda HOM05D004411 ORTHO05D005569 8.8e-52 209.1 249 47.8
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 7.0e-49 199.5 380 37.9
Zm00001eb253190 Zea mays HOM05D004411 ORTHO05D005569 2.0e-48 198.0 225 46.7
BolC5t32046H Brassica oleracea HOM05D004411 ORTHO05D005569 2.7e-48 197.6 214 53.7
CDE07G0547 Ceratophyllum demersum HOM05D004411 ORTHO05D005569 2.7e-48 197.6 308 39.3
MD03G1208200 Malus domestica HOM05D004411 ORTHO05D005569 2.7e-48 197.6 353 42.2
BcaB06g26197 Brassica carinata HOM05D004411 ORTHO05D005569 4.5e-48 196.8 262 47.7
HPP92_013625 Vanilla planifolia HOM05D004411 ORTHO05D005569 2.9e-47 194.1 385 38.2
Nn1g07099 Nelumbo nucifera HOM05D004411 ORTHO05D005569 3.8e-47 193.7 185 58.4
Zm00001eb317630 Zea mays HOM05D004411 ORTHO05D005569 6.5e-47 193.0 343 38.5
BcaB02g11193 Brassica carinata HOM05D004411 ORTHO05D005569 2.1e-45 188.0 321 41.7
Os09g0504900 Oryza sativa ssp. japonica HOM05D004411 ORTHO05D005569 5.2e-44 183.3 346 38.4
Sopen07g032450 Solanum pennellii HOM05D004411 ORTHO05D005569 6.8e-44 183.0 275 42.9
C05p33200 Brassica napus HOM05D004411 ORTHO05D005569 8.8e-44 182.6 192 55.7
PSO210G0554 Papaver somniferum HOM05D004411 ORTHO05D005569 6.3e-42 176.4 315 41.3
Nitab4.5_0000622g0210 Nicotiana tabacum HOM05D004411 ORTHO05D005569 1.0e-39 169.1 184 53.3
SEGI_26616 Sequoiadendron giganteum HOM05D004411 ORTHO05D005569 4.2e-38 163.7 275 40.4
COL.COLO4_09627 Corchorus olitorius HOM05D004411 ORTHO05D005569 1.8e-36 158.3 281 39.9
Ah.06g195930 Amaranthus hybridus HOM05D004411 ORTHO05D005569 3.0e-36 157.5 274 40.9
PGSC0003DMG401013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 9.8e-35 152.5 197 41.1
ECA236G1239 Erigeron canadensis HOM05D004411 ORTHO05D005569 1.3e-31 142.1 238 45.8
VMungo1383G2244 Vigna mungo HOM05D004411 ORTHO05D005569 1.3e-31 142.1 120 61.7
PSO339G6638 Papaver somniferum HOM05D004411 ORTHO05D005569 1.7e-31 141.7 170 48.2
MELO3C026928.2 Cucumis melo HOM05D004411 ORTHO05D005569 1.0e-28 132.5 102 71.6
Cc09_g02490 Coffea canephora HOM05D004411 ORTHO05D005569 1.4e-25 122.1 93 67.7
Glyma.09G101400 Glycine max HOM05D004411 ORTHO05D005569 1.4e-25 122.1 210 40.5
DCAR_011015 Daucus carota HOM05D004411 ORTHO05D005569 9.2e-25 119.4 195 37.4
VMungo0540G0671 Vigna mungo HOM05D004411 ORTHO05D005569 3.0e-23 114.4 207 39.1
Pp3c25_11530 Physcomitrium patens HOM05D004411 ORTHO05D005569 1.1e-22 112.5 252 34.5
VMungo1383G3213 Vigna mungo HOM05D004411 ORTHO05D005569 1.1e-22 112.5 126 50.0
Cc00_g16970 Coffea canephora HOM05D004411 ORTHO05D005569 5.6e-22 110.2 90 61.1
A05p19860 Brassica napus HOM05D004411 ORTHO05D005569 2.1e-21 108.2 121 50.4
BraA05t20891Z Brassica rapa HOM05D004411 ORTHO05D005569 2.1e-21 108.2 121 50.4
Glyma.09G101500 Glycine max HOM05D004411 ORTHO05D005569 3.6e-21 107.5 82 63.4
Hma1.2p1_3713F.1_g337350 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 1.8e-20 105.1 94 57.4
BcaC05g27378 Brassica carinata HOM05D003430 ORTHO05D004809 5.2e-20 103.6 104 55.8
EL10Ac9g22233 Beta vulgaris HOM05D004411 ORTHO05D005569 5.8e-19 100.1 245 34.3
Cc02_g22100 Coffea canephora HOM05D004411 ORTHO05D005569 7.5e-19 99.8 107 52.3
Oeu034511.1 Olea europaea HOM05D004411 ORTHO05D005569 8.6e-15 86.3 82 52.4
Haze_07158 Corylus avellana HOM05D004411 ORTHO05D005569 1.9e-14 85.1 77 55.8
GSVIVG01036883001 Vitis vinifera HOM05D004411 ORTHO05D005569 7.3e-14 83.2 55 69.1
Mapoly0160s0028 Marchantia polymorpha HOM05D004411 ORTHO05D005569 1.2e-13 82.4 210 30.0
arahy.Tifrunner.gnm1.ann1.ZM7UYF Arachis hypogaea HOM05D004411 ORTHO05D005569 2.3e-12 78.2 81 50.6
MELO3C031858.2 Cucumis melo HOM05D004411 ORTHO05D005569 2.0e-11 75.1 55 72.7
SMO367G0149 Selaginella moellendorffii HOM05D004411 ORTHO05D005569 9.9e-11 72.8 209 29.2
Lalb_Chr15g0080381 Lupinus albus HOM05D004411 ORTHO05D005569 2.4e-09 68.2 110 38.2
MELO3C031645.2 Cucumis melo HOM05D004411 ORTHO05D005569 5.4e-09 67.0 55 67.3
AagrBONN_evm.TU.Sc2ySwM_344.3992 Anthoceros agrestis HOM05D004411 ORTHO05D005569 2.1e-08 65.1 338 27.2
arahy.Tifrunner.gnm1.ann1.H97TV8 Arachis hypogaea HOM05D004411 ORTHO05D005569 3.0e-07 61.2 114 31.6


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