Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 4.6e-82 307.8 146 100.0
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 3.1e-78 295.0 146 95.9
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 2.1e-74 282.3 147 92.5
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 2.3e-65 252.3 145 81.4
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 3.0e-65 251.9 145 80.0
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 3.0e-65 251.9 148 80.4
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 3.9e-65 251.5 148 79.7
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 6.6e-65 250.8 148 79.7
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 6.6e-65 250.8 141 80.9
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 1.9e-64 249.2 151 80.8
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 1.9e-64 249.2 149 78.5
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 5.6e-64 247.7 148 79.7
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 1.3e-63 246.5 148 80.4
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 2.1e-63 245.7 147 78.2
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 2.8e-63 245.4 150 76.0
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 3.6e-63 245.0 147 74.8
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 3.6e-63 245.0 146 78.1
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 4.8e-63 244.6 147 79.6
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 4.8e-63 244.6 149 78.5
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 6.2e-63 244.2 147 76.2
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 6.2e-63 244.2 147 76.2
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 1.1e-62 243.4 147 77.6
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.8e-62 242.7 147 74.1
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 1.8e-62 242.7 147 76.2
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 5.3e-62 241.1 150 75.3
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 5.3e-62 241.1 147 76.2
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 9.0e-62 240.4 142 77.5
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 9.0e-62 240.4 147 74.8
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 9.0e-62 240.4 143 79.7
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.5e-61 239.6 143 79.0
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 1.5e-61 239.6 148 76.4
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 2.0e-61 239.2 139 78.4
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 2.0e-61 239.2 138 81.2
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 2.6e-61 238.8 143 79.0
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 2.6e-61 238.8 142 79.6
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 4.5e-61 238.0 142 76.8
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 4.5e-61 238.0 141 81.6
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 4.5e-61 238.0 142 79.6
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 5.8e-61 237.7 141 79.4
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 5.8e-61 237.7 147 75.5
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 9.9e-61 236.9 148 75.7
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 9.9e-61 236.9 147 72.8
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.3e-60 236.5 145 73.1
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 1.7e-60 236.1 146 74.0
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 1.7e-60 236.1 147 74.8
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 2.2e-60 235.7 140 77.1
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 2.9e-60 235.3 142 78.2
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 2.9e-60 235.3 147 75.5
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.9e-60 234.6 145 72.4
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 6.4e-60 234.2 147 74.1
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 8.4e-60 233.8 144 76.4
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.1e-59 233.4 128 82.8
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.4e-59 233.0 149 73.2
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 2.4e-59 232.3 147 74.8
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 2.4e-59 232.3 145 71.7
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.2e-59 231.9 149 73.2
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.2e-59 231.9 146 74.7
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 5.4e-59 231.1 124 83.1
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 5.4e-59 231.1 150 72.7
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 7.1e-59 230.7 142 73.9
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 1.2e-58 229.9 126 83.3
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 1.2e-58 229.9 141 75.9
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.6e-58 229.6 145 73.1
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.7e-58 228.8 141 74.5
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 3.5e-58 228.4 137 76.6
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 3.5e-58 228.4 130 78.5
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 6.0e-58 227.6 133 75.9
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 1.3e-57 226.5 138 75.4
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 1.8e-57 226.1 148 73.0
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 3.9e-57 224.9 139 74.8
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 6.7e-57 224.2 137 75.9
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 3.3e-56 221.9 141 73.8
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 4.8e-55 218.0 147 69.4
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 4.8e-55 218.0 167 64.1
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 8.1e-55 217.2 144 68.1
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 4.0e-54 214.9 145 67.6
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 4.0e-54 214.9 142 70.4
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 6.9e-54 214.2 146 68.5
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 1.2e-53 213.4 142 70.4
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 1.5e-53 213.0 146 67.8
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 1.5e-53 213.0 146 67.8
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 4.5e-53 211.5 146 65.8
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 4.5e-53 211.5 144 66.7
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 4.5e-53 211.5 168 61.9
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 9.9e-53 210.3 146 65.8
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 9.9e-53 210.3 147 68.0
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 1.3e-52 209.9 146 67.1
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 1.7e-52 209.5 146 66.4
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 1.7e-52 209.5 146 66.4
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 1.7e-52 209.5 146 66.4
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 2.2e-52 209.1 146 67.8
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 2.2e-52 209.1 132 72.0
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 2.2e-52 209.1 132 72.0
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 2.9e-52 208.8 146 65.8
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 4.9e-52 208.0 136 69.9
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 1.1e-51 206.8 208 51.9
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 1.4e-51 206.5 137 67.9
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 1.9e-51 206.1 146 65.8
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 2.4e-51 205.7 147 65.3
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 3.2e-51 205.3 133 70.7
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 4.2e-51 204.9 137 67.9
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 1.6e-50 203.0 128 68.8
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.6e-50 203.0 138 69.6
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 2.7e-50 202.2 101 94.1
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 6.7e-49 197.6 135 68.1
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 2.5e-48 195.7 178 57.9
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 5.6e-48 194.5 133 68.4
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.3e-47 193.4 117 77.8
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 1.3e-47 193.4 120 76.7
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 9.0e-46 187.2 136 61.8
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 2.3e-41 172.6 118 69.5
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 8.7e-41 170.6 94 83.0
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.3e-39 166.8 96 80.2
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 1.6e-39 166.4 93 81.7
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 2.6e-37 159.1 96 79.2
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.0e-36 154.8 97 73.2
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 5.7e-32 141.4 97 70.1
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 1.0e-20 104.0 109 54.1
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 4.7e-18 95.1 66 65.2
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-14 84.0 43 83.7
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 5.3e-14 81.6 50 70.0
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 1.2e-10 70.5 51 56.9
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.0e-09 67.4 35 91.4
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 5.7e-08 61.6 57 57.9


User provided reference genes

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