Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 7.9e-194 680.2 342 100.0
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 2.7e-133 479.2 259 91.5
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 9.3e-126 454.1 262 86.3
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 2.5e-123 446.0 297 78.8
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 5.3e-105 385.2 245 75.1
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 1.2e-104 384.0 245 75.9
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 4.5e-104 382.1 248 73.8
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 2.2e-103 379.8 245 75.1
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 4.9e-103 378.6 244 75.4
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 6.5e-103 378.3 252 71.0
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 8.4e-103 377.9 245 73.1
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 1.1e-102 377.5 245 75.9
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 1.9e-102 376.7 244 73.8
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 1.2e-101 374.0 245 71.8
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 2.1e-101 373.2 245 74.7
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 4.6e-101 372.1 244 71.7
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.8e-100 370.2 255 71.8
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 1.8e-100 370.2 244 73.0
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 1.8e-100 370.2 246 71.5
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 2.3e-100 369.8 249 72.3
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 3.0e-100 369.4 245 71.0
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 3.9e-100 369.0 245 75.1
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 5.1e-100 368.6 246 73.2
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 6.7e-100 368.2 246 70.7
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 6.7e-100 368.2 245 73.5
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 8.7e-100 367.9 245 73.1
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 1.1e-99 367.5 244 73.0
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 2.5e-99 366.3 245 71.8
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 4.3e-99 365.5 244 70.9
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 5.7e-99 365.2 245 73.1
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 7.4e-99 364.8 245 71.0
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 9.7e-99 364.4 246 72.0
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 1.6e-98 363.6 243 71.2
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 2.8e-98 362.8 244 72.5
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 6.9e-97 358.2 245 69.8
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 6.9e-97 358.2 245 71.0
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 1.2e-96 357.5 245 71.0
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 6.5e-95 351.7 239 70.7
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 1.9e-94 350.1 245 67.8
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 3.2e-94 349.4 245 69.8
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 3.2e-94 349.4 244 69.7
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 5.5e-94 348.6 246 67.5
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 2.1e-93 346.7 245 67.3
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 2.1e-93 346.7 243 67.9
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 2.7e-93 346.3 245 69.8
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 7.9e-93 344.7 245 65.7
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 1.4e-92 344.0 243 69.5
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 1.4e-92 344.0 242 67.4
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 1.8e-92 343.6 245 66.9
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.8e-92 343.6 247 66.0
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 3.0e-92 342.8 243 67.9
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 3.9e-92 342.4 239 67.8
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 3.9e-92 342.4 243 68.3
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 1.1e-91 340.9 253 66.0
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 1.9e-91 340.1 243 67.9
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 2.5e-91 339.7 243 67.1
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 5.7e-91 338.6 243 67.9
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 7.4e-91 338.2 243 67.9
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 7.4e-91 338.2 243 66.3
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 7.4e-91 338.2 245 64.9
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 9.7e-91 337.8 245 70.2
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 1.7e-90 337.0 243 68.7
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 1.7e-90 337.0 245 66.1
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 1.7e-90 337.0 243 67.1
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 2.8e-90 336.3 251 65.7
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 3.7e-90 335.9 246 68.3
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 4.8e-90 335.5 270 61.5
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 6.3e-90 335.1 246 65.4
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 4.1e-89 332.4 246 67.5
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 6.9e-89 331.6 245 66.9
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 6.9e-89 331.6 244 65.6
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 2.0e-88 330.1 243 65.8
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 5.9e-88 328.6 242 66.1
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 5.9e-88 328.6 244 67.2
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 7.7e-88 328.2 242 66.1
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 1.0e-87 327.8 218 70.2
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 1.4e-86 323.9 237 66.2
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 2.5e-86 323.2 244 63.9
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 5.5e-86 322.0 202 76.2
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 3.6e-85 319.3 201 75.1
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 6.1e-85 318.5 245 63.7
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 1.4e-84 317.4 245 64.1
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 3.0e-84 316.2 243 64.6
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 6.7e-84 315.1 220 69.1
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 8.2e-82 308.1 260 60.8
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 1.4e-81 307.4 201 73.1
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 4.1e-81 305.8 195 73.3
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 2.9e-79 299.7 216 66.7
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 5.0e-79 298.9 245 62.0
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 6.5e-79 298.5 216 65.7
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 2.5e-78 296.6 217 68.2
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 2.5e-78 296.6 217 67.7
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 3.2e-78 296.2 259 60.2
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 4.2e-78 295.8 196 70.4
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 5.5e-78 295.4 217 67.7
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 7.2e-78 295.0 216 65.7
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 2.7e-77 293.1 217 67.3
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 1.4e-76 290.8 192 69.8
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 1.4e-76 290.8 177 78.5
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 5.7e-75 285.4 193 69.4
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 1.7e-74 283.9 243 60.1
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 1.1e-73 281.2 299 51.8
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.2e-72 277.7 245 53.5
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 1.6e-72 277.3 243 58.0
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.6e-72 276.6 245 53.9
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.0e-71 274.6 247 52.6
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.9e-71 273.1 243 53.9
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 1.2e-69 267.7 235 60.0
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.6e-69 267.3 243 51.4
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 8.0e-69 265.0 245 58.8
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 3.1e-65 253.1 184 66.3
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 5.3e-65 252.3 197 61.4
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 1.2e-64 251.1 166 69.3
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.7e-64 250.0 233 52.4
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 5.9e-64 248.8 164 71.3
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 6.5e-63 245.4 243 59.3
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 5.5e-62 242.3 210 57.6
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 7.2e-62 241.9 241 53.5
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 4.7e-61 239.2 206 60.7
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 4.4e-59 232.6 218 52.8
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-57 227.3 213 52.1
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 1.8e-57 227.3 144 75.0
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 5.0e-55 219.2 196 57.1
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 4.7e-53 212.6 167 64.1
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 2.3e-52 210.3 172 62.2
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 1.2e-51 208.0 215 48.4
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 2.0e-51 207.2 180 58.9
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 2.0e-51 207.2 227 51.5
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 9.2e-49 198.4 194 51.5
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 5.9e-48 195.7 199 52.8
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 8.6e-47 191.8 135 69.6
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 2.8e-45 186.8 237 45.6
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 3.0e-44 183.3 107 81.3
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 1.5e-43 181.0 192 51.6
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 1.2e-40 171.4 261 38.7
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.5e-38 164.5 106 71.7
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 1.2e-37 161.4 105 71.4
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 8.9e-36 155.2 105 73.3
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 1.5e-35 154.5 106 64.2
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 2.7e-32 143.7 215 43.3
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 7.8e-32 142.1 103 66.0
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.6e-29 134.4 158 47.5
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 6.6e-23 112.5 127 46.5
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 1.9e-22 110.9 179 36.9
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 8.4e-18 95.5 67 67.2
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 3.3e-14 83.6 65 61.5
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-14 82.8 81 48.1
FAN24G2452 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.8e-13 80.5 55 63.6
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 2.6e-11 73.9 72 52.8
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 1.3e-10 71.6 110 35.5
SEGI_37983 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 2.9e-10 70.5 82 41.5
FAN16G1285 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.2e-08 65.1 44 65.9


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