Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 7.8e-278 959.9 512 100.0
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 1.4e-231 806.2 512 84.0
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 2.5e-191 672.5 533 71.7
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 2.8e-142 509.6 317 88.0
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 5.3e-117 425.6 543 49.5
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 5.8e-116 422.2 509 51.7
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 4.9e-115 419.1 544 50.0
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 1.1e-114 417.9 543 49.7
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 1.4e-114 417.5 531 49.7
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 7.1e-114 415.2 520 48.1
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 1.6e-113 414.1 500 49.6
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 8.7e-112 408.3 520 49.6
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 1.9e-111 407.1 524 49.6
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 1.9e-111 407.1 505 50.1
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.8e-110 403.3 505 49.9
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 5.3e-109 399.1 540 48.1
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 6.9e-109 398.7 547 48.1
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 9.0e-109 398.3 534 47.8
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.2e-108 397.9 505 49.3
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.6e-108 396.7 503 49.7
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 7.6e-108 395.2 507 50.7
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 1.7e-107 394.0 522 48.5
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 3.2e-106 389.8 524 47.1
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 2.7e-105 386.7 533 46.7
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 2.7e-105 386.7 522 48.1
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 1.3e-104 384.4 527 46.9
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 3.0e-104 383.3 525 47.0
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 3.0e-104 383.3 513 47.2
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 9.7e-103 378.3 493 49.5
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 4.8e-102 375.9 530 46.6
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 6.5e-99 365.5 522 46.0
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 2.5e-98 363.6 516 45.7
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 5.5e-98 362.5 506 48.2
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 4.6e-97 359.4 522 46.9
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 1.5e-95 354.4 550 43.8
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 2.6e-95 353.6 502 44.6
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 1.3e-94 351.3 496 46.6
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 1.1e-93 348.2 512 44.3
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 1.5e-92 344.4 507 44.2
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 7.7e-92 342.0 502 44.2
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 6.5e-91 339.0 515 44.3
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 4.2e-90 336.3 541 40.9
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 4.2e-90 336.3 514 44.0
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 7.2e-90 335.5 525 43.2
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 1.6e-89 334.3 518 44.0
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 2.1e-89 334.0 518 44.2
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 3.6e-89 333.2 511 43.1
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 4.7e-89 332.8 529 41.6
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 6.1e-89 332.4 514 42.4
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 1.8e-88 330.9 515 42.3
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.6e-87 327.0 506 44.7
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 4.4e-87 326.2 506 44.5
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 9.7e-87 325.1 508 43.9
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 1.3e-86 324.7 505 41.8
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 1.7e-86 324.3 503 43.3
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 2.8e-86 323.6 497 42.1
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 4.8e-86 322.8 514 41.8
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 1.8e-85 320.9 424 50.5
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 9.1e-85 318.5 442 47.3
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 2.6e-84 317.0 467 46.9
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 2.6e-84 317.0 505 42.6
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 4.5e-84 316.2 458 46.1
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 2.9e-83 313.5 433 47.8
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 2.7e-81 307.0 541 37.5
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 5.2e-80 302.8 511 41.3
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 5.2e-80 302.8 511 41.3
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 1.7e-78 297.7 516 40.7
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 4.1e-77 293.1 503 41.7
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 1.3e-75 288.1 507 41.2
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 2.2e-75 287.3 256 63.7
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 8.0e-73 278.9 477 40.0
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 4.0e-72 276.6 272 55.5
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 6.3e-70 269.2 320 49.4
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.4e-69 268.1 297 53.9
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 5.0e-67 259.6 335 46.9
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 1.1e-66 258.5 415 43.4
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 7.2e-66 255.8 349 45.8
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 7.2e-66 255.8 297 49.8
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 1.2e-65 255.0 428 40.0
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 3.6e-65 253.4 470 37.7
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 1.0e-64 251.9 419 42.2
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 2.3e-64 250.8 421 42.5
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.5e-63 248.1 240 56.2
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 4.4e-63 246.5 512 35.4
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 7.5e-63 245.7 602 32.4
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 1.8e-61 241.1 313 46.6
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 5.4e-61 239.6 261 54.0
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 4.3e-58 229.9 344 43.0
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 2.3e-56 224.2 262 48.9
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.0e-51 208.8 428 36.0
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 5.0e-51 206.5 147 73.5
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 1.5e-47 194.9 337 39.2
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 2.0e-47 194.5 337 39.5
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 1.3e-46 191.8 587 28.6
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 5.4e-45 186.4 292 41.4
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 1.3e-43 181.8 603 27.2
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 1.2e-36 158.7 241 40.2
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 2.1e-25 121.3 368 30.7
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 4.0e-24 117.1 112 53.6
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 2.1e-20 104.8 89 59.6
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 6.4e-14 83.2 168 39.3
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.9e-13 81.6 81 46.9
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 3.2e-13 80.9 88 42.0
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 5.6e-10 70.1 66 50.0
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 4.8e-09 67.0 60 56.7
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 5.3e-08 63.5 75 52.0


User provided reference genes

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