Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 8.0e-266 919.8 458 100.0
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.2e-240 836.3 477 89.1
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 2.7e-237 825.1 459 89.8
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 2.6e-232 808.5 459 88.7
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 4.3e-219 764.6 458 83.4
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.9e-190 669.5 333 100.0
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 3.6e-157 558.9 468 63.9
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 9.1e-153 544.3 467 61.5
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 1.4e-148 530.4 471 59.4
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 6.8e-148 528.1 456 61.6
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 1.0e-143 514.2 499 57.3
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 1.7e-143 513.5 465 60.4
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 4.2e-142 508.8 475 57.5
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 5.5e-142 508.4 463 60.9
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 9.5e-142 507.7 487 59.8
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 8.8e-140 501.1 502 56.4
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 1.2e-139 500.7 504 55.6
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 2.0e-139 500.0 497 56.3
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 2.0e-139 500.0 500 56.0
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 7.5e-139 498.0 503 53.5
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 9.8e-139 497.7 464 58.4
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 1.7e-138 496.9 501 55.1
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 2.4e-137 493.0 498 55.6
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 3.1e-137 492.7 500 56.2
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 5.4e-137 491.9 468 56.0
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 2.0e-136 490.0 456 59.0
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 2.7e-136 489.6 456 59.0
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.0e-135 487.6 458 59.4
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.7e-135 486.9 458 59.0
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 1.7e-135 486.9 506 54.9
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 6.6e-135 485.0 471 58.0
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 8.6e-135 484.6 490 56.9
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 1.2e-133 480.7 468 55.6
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 5.2e-132 475.3 469 56.3
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 6.8e-132 474.9 502 53.0
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 1.3e-130 470.7 465 55.7
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 1.7e-130 470.3 468 54.1
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 8.3e-130 468.0 469 55.4
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 1.4e-129 467.2 482 55.2
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 1.4e-129 467.2 469 55.4
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 9.2e-129 464.5 469 55.2
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 1.2e-128 464.2 467 54.6
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 7.8e-128 461.5 473 54.5
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 2.5e-126 456.4 474 53.0
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 6.2e-125 451.8 472 52.5
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 8.0e-125 451.4 466 55.2
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 2.3e-124 449.9 465 54.0
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 6.8e-124 448.4 462 53.9
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 1.5e-123 447.2 474 53.2
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 4.4e-123 445.7 468 53.8
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 4.4e-123 445.7 476 53.2
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 5.8e-123 445.3 462 55.4
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 5.8e-123 445.3 412 59.0
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 9.8e-123 444.5 463 54.2
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 1.7e-122 443.7 463 55.1
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 1.7e-122 443.7 464 52.4
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 4.9e-122 442.2 477 52.8
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 1.4e-121 440.7 463 52.5
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 1.4e-121 440.7 464 54.5
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 1.9e-121 440.3 462 54.1
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 3.5e-120 436.0 467 51.4
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 3.5e-120 436.0 460 54.3
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 7.8e-120 434.9 460 53.5
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 3.0e-119 433.0 461 50.5
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 3.9e-119 432.6 465 51.4
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 7.3e-118 428.3 463 49.2
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 1.6e-117 427.2 473 50.5
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 1.1e-116 424.5 460 52.6
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 5.2e-116 422.2 452 50.7
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 1.2e-115 421.0 461 51.2
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 2.0e-115 420.2 539 47.5
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 5.8e-115 418.7 462 51.3
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 1.7e-114 417.2 461 51.0
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 2.2e-114 416.8 462 51.5
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 2.9e-114 416.4 475 48.2
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 3.7e-114 416.0 408 53.9
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 6.4e-114 415.2 461 52.5
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 1.6e-112 410.6 470 50.2
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 1.0e-111 407.9 427 53.4
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 2.4e-108 396.7 475 50.1
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 5.2e-108 395.6 493 45.6
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 4.4e-107 392.5 467 49.3
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 8.1e-101 371.7 385 53.5
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 1.2e-99 367.9 395 55.2
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 3.4e-99 366.3 454 46.7
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 3.4e-99 366.3 454 49.1
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 3.5e-96 356.3 459 45.8
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 4.8e-93 345.9 375 52.5
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 5.8e-91 339.0 341 54.5
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 1.7e-90 337.4 408 47.3
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 1.0e-87 328.2 458 43.7
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 2.4e-81 307.0 460 43.3
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 1.6e-80 304.3 470 38.7
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 2.5e-78 297.0 456 40.4
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 3.7e-69 266.5 217 64.5
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 3.1e-68 263.5 215 60.0
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 1.3e-66 258.1 212 63.7
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 7.2e-65 252.3 206 63.6
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 8.8e-63 245.4 329 45.0
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.8e-61 240.4 124 96.8
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 6.9e-60 235.7 287 47.4
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 3.4e-59 233.4 473 33.6
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 1.8e-55 221.1 543 32.2
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 3.9e-55 219.9 265 45.3
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 3.9e-55 219.9 249 52.2
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.8e-52 211.1 199 55.8
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 1.5e-51 208.0 462 33.5
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 1.4e-49 201.4 527 30.0
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 1.4e-47 194.9 124 78.2
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 8.5e-34 149.1 177 43.5
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 1.1e-28 132.1 109 65.1
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 3.6e-24 117.1 69 81.2
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 3.0e-23 114.0 134 49.3
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 2.6e-22 110.9 72 75.0
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 5.4e-20 103.2 96 59.4
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 1.5e-14 85.1 95 54.7
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 4.9e-13 80.1 45 84.4
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 1.4e-12 78.6 153 34.6
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 3.5e-11 73.9 55 67.3
Cre02.g083400 Chlamydomonas reinhardtii HOM05D006388 ORTHO05D008026 1.2e-08 65.5 171 32.7
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 4.7e-08 63.5 47 59.6


User provided reference genes

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