Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 0.0e+00 1622.4 844 100.0
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 0.0e+00 1616.3 844 99.6
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 0.0e+00 1497.6 779 99.7
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 0.0e+00 1435.6 844 89.2
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 0.0e+00 1427.5 848 88.4
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 0.0e+00 1383.6 844 85.4
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 4.9e-293 1011.1 847 62.7
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.8e-292 1009.2 847 62.7
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 9.2e-284 980.3 844 61.7
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 4.3e-281 971.5 847 61.0
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 4.4e-278 961.4 846 60.2
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 4.4e-278 961.4 846 59.8
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 1.6e-275 953.0 847 59.0
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 3.0e-274 948.7 821 60.3
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.0e-274 948.7 821 60.3
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 3.6e-272 941.8 821 59.9
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 1.1e-271 940.3 817 61.0
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 4.0e-271 938.3 823 59.8
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.2e-268 928.7 846 59.6
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 2.7e-267 925.6 817 59.2
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 4.6e-267 924.9 845 58.2
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 7.8e-267 924.1 845 58.1
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 1.5e-265 919.8 852 58.0
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 7.3e-265 917.5 822 58.2
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 1.4e-263 913.3 810 57.8
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.8e-263 912.9 838 58.2
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 3.1e-263 912.1 815 58.0
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 7.6e-262 907.5 815 58.7
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 9.9e-262 907.1 850 57.2
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 4.1e-260 901.7 842 57.4
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 2.1e-259 899.4 845 57.3
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 5.1e-258 894.8 842 57.4
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 3.8e-253 878.6 821 56.2
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 7.8e-251 870.9 814 56.9
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 3.0e-250 869.0 815 56.4
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.5e-249 866.7 822 55.4
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 1.5e-249 866.7 816 56.7
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 4.3e-249 865.1 828 55.7
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 5.6e-249 864.8 814 57.1
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 5.6e-249 864.8 816 56.5
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 9.6e-249 864.0 845 55.0
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 9.6e-249 864.0 816 56.2
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 2.4e-247 859.4 809 57.5
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 5.8e-246 854.7 846 54.6
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 1.4e-244 850.1 837 54.8
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.2e-243 847.0 838 54.8
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.0e-242 844.0 814 55.8
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 5.6e-241 838.2 822 54.5
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 7.3e-241 837.8 849 54.3
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 2.1e-240 836.3 811 55.4
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 1.8e-239 833.2 826 53.1
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 2.0e-238 829.7 814 54.7
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 1.7e-237 826.6 826 54.6
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.4e-236 823.5 845 52.3
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.4e-236 822.8 845 52.2
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 2.4e-236 822.8 827 53.9
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 9.6e-233 810.8 848 53.3
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 4.8e-232 808.5 831 52.0
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 6.5e-229 798.1 825 53.0
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 3.2e-228 795.8 824 51.9
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 5.1e-226 788.5 826 51.5
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 1.6e-224 783.5 829 52.2
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 3.4e-222 775.8 819 52.9
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 2.9e-221 772.7 820 50.5
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 5.0e-221 771.9 792 52.1
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 3.2e-220 769.2 835 50.5
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 3.7e-216 755.7 822 52.1
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 1.1e-215 754.2 815 51.8
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 2.4e-215 753.1 812 50.2
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 3.1e-215 752.7 818 50.5
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 5.9e-214 748.4 822 49.9
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 5.9e-214 748.4 781 53.0
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 1.0e-213 747.7 812 50.5
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 4.2e-212 742.3 861 50.8
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 1.6e-211 740.3 818 50.0
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 2.1e-211 740.0 813 49.9
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 1.0e-210 737.6 834 48.9
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.5e-209 733.8 759 52.8
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.0e-209 733.4 759 52.7
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 3.3e-209 732.6 816 49.8
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 6.3e-208 728.4 823 49.0
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 4.1e-207 725.7 840 48.3
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.3e-205 720.7 861 49.0
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 6.7e-202 708.4 835 48.9
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 5.7e-201 705.3 669 57.0
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 3.7e-200 702.6 817 48.6
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 2.6e-198 696.4 811 50.1
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 6.1e-195 685.3 836 47.0
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 2.3e-194 683.3 622 59.5
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 6.7e-194 681.8 624 57.5
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 4.8e-192 675.6 801 44.7
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 7.5e-169 598.6 829 42.2
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.1e-167 594.7 557 58.7
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 1.5e-164 584.3 810 42.7
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.1e-163 580.5 759 47.3
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 7.0e-159 565.5 626 50.0
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 7.3e-148 528.9 565 51.7
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.3e-144 518.1 484 57.6
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 7.3e-140 502.3 422 60.7
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 8.1e-131 472.2 657 41.7
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 9.3e-127 458.8 801 40.6
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.1e-114 418.7 533 46.0
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.4e-111 408.3 353 60.9
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.1e-101 373.2 305 62.0
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 2.8e-91 340.9 928 29.0
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 5.9e-89 333.2 487 46.4
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.0e-85 322.4 886 29.0
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 6.7e-85 319.7 279 58.4
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.4e-82 311.2 305 55.4
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.5e-73 280.8 224 66.1
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 6.1e-70 270.0 843 27.9
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 9.1e-66 256.1 208 59.6
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 5.9e-57 226.9 251 46.2
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 1.7e-56 225.3 371 38.3
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 3.4e-52 211.1 625 31.4
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 7.5e-52 209.9 567 27.3
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.6e-41 175.6 224 46.9
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 6.2e-22 110.5 156 43.6
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 1.5e-20 105.9 71 69.0
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 3.9e-16 91.3 639 19.9


User provided reference genes

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