Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.2e-185 652.1 324 100.0
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 6.9e-163 577.4 304 95.1
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.5e-162 576.2 304 95.1
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 2.3e-158 562.4 304 91.4
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 4.8e-148 528.1 311 83.3
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.4e-147 526.6 306 85.0
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.3e-145 520.0 304 84.2
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.7e-145 519.6 304 84.9
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.1e-141 506.9 304 81.9
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.6e-140 503.1 299 82.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 2.8e-140 502.3 304 82.2
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 8.2e-140 500.7 306 80.1
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.8e-139 499.6 304 82.9
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.2e-138 496.9 304 79.9
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 2.0e-138 496.1 304 79.9
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 3.4e-138 495.4 302 79.8
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 2.2e-137 492.7 304 78.9
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 2.2e-137 492.7 304 81.2
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 2.2e-137 492.7 304 81.6
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.2e-137 492.7 304 79.9
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 3.8e-137 491.9 307 80.5
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 5.0e-137 491.5 299 81.9
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 6.5e-137 491.1 304 80.6
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 8.5e-137 490.7 305 79.0
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 8.5e-137 490.7 305 79.0
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.4e-136 490.0 304 78.0
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 1.9e-136 489.6 304 77.3
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 5.5e-136 488.0 299 81.9
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 7.2e-136 487.6 304 80.6
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 7.2e-136 487.6 304 78.3
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 9.4e-136 487.3 299 81.3
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.2e-135 486.9 304 79.3
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.6e-135 486.5 304 78.0
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.6e-135 486.5 304 78.3
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 2.1e-135 486.1 304 78.3
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 2.1e-135 486.1 304 79.3
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.6e-135 485.3 302 78.1
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 4.6e-135 485.0 304 78.9
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 6.1e-135 484.6 304 79.9
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 1.0e-134 483.8 304 79.9
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.0e-134 483.8 306 77.8
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 2.3e-134 482.6 304 77.0
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 3.9e-134 481.9 304 78.3
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 6.7e-134 481.1 297 79.1
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.1e-133 480.3 304 76.6
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.5e-133 479.9 304 78.9
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 2.0e-133 479.6 304 78.3
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 3.3e-133 478.8 305 76.7
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 4.3e-133 478.4 304 76.3
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 4.3e-133 478.4 304 76.3
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 4.3e-133 478.4 304 78.3
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 4.3e-133 478.4 304 76.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 7.4e-133 477.6 304 76.3
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 2.2e-132 476.1 304 76.3
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 2.8e-132 475.7 304 76.0
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 3.7e-132 475.3 304 76.0
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 4.8e-132 474.9 304 76.3
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.4e-131 473.4 306 76.8
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.4e-131 473.4 306 76.8
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 6.9e-131 471.1 306 76.5
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 9.1e-131 470.7 306 75.8
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 9.1e-131 470.7 306 76.5
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 2.6e-130 469.2 306 76.1
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 2.6e-130 469.2 304 76.3
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.6e-130 469.2 306 75.8
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.4e-130 468.8 306 75.5
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 1.3e-129 466.8 304 75.7
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.1e-128 463.8 304 75.3
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 2.5e-128 462.6 304 75.0
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 5.5e-128 461.5 292 80.1
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 9.4e-128 460.7 300 76.0
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.2e-127 460.3 300 76.0
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 2.1e-127 459.5 310 72.3
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 6.1e-127 458.0 309 74.8
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.0e-126 457.2 304 72.7
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.0e-126 455.7 306 75.5
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 5.1e-126 454.9 306 75.8
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 6.7e-126 454.5 300 76.0
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 6.7e-126 454.5 310 71.9
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.1e-125 453.8 306 75.2
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.5e-125 453.4 306 75.8
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.7e-121 439.9 283 77.4
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.8e-118 429.9 291 71.8
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 7.4e-117 424.5 262 79.8
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 4.1e-115 418.7 299 67.9
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 7.0e-115 417.9 300 68.3
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 5.5e-112 408.3 299 65.6
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.2e-111 407.1 304 66.8
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 4.4e-109 398.7 304 67.4
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.3e-108 397.1 246 80.5
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.4e-107 393.7 270 71.1
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 4.2e-104 382.1 266 72.2
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.5e-96 356.3 242 71.9
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.2e-96 355.5 306 57.8
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 2.0e-93 346.7 264 65.9
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.4e-91 339.7 255 66.7
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.9e-89 332.8 230 71.3
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 3.9e-89 332.4 218 76.6
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 4.3e-88 328.9 295 59.3
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 9.5e-88 327.8 298 56.7
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 6.1e-87 325.1 288 56.6
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 3.4e-85 319.3 299 54.5
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.0e-81 305.4 196 76.0
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.2e-77 294.3 306 55.2
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 3.7e-76 289.3 195 70.8
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.5e-72 277.3 297 50.5
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.9e-67 260.4 310 45.2
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 6.6e-65 251.9 215 61.4
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.1e-55 218.4 143 75.5
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.1e-54 216.5 144 75.7
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.5e-53 214.2 303 43.9
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-52 210.7 144 72.9
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.3e-48 195.3 144 70.8
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.8e-46 190.7 313 39.6
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 3.4e-45 186.4 162 54.9
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.5e-40 170.2 107 76.6
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 7.6e-37 158.7 359 31.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.2e-35 153.3 91 75.8
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.7e-34 150.2 261 41.4
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 4.6e-34 149.4 303 33.7
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 5.8e-29 132.5 335 31.0
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.0e-25 121.7 80 73.8
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.4e-14 84.7 43 88.4


User provided reference genes

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