Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G000980 Citrullus lanatus HOM05D001798 ORTHO05D022392 1.7e-153 546.2 324 100.0
MELO3C013791.2 Cucumis melo HOM05D001798 ORTHO05D022392 1.2e-45 188.0 125 84.0
CsaV3_3G001020 Cucumis sativus L. HOM05D001798 ORTHO05D022392 3.0e-33 146.7 273 43.6
Sed0003670 Sechium edule HOM05D001798 ORTHO05D022392 3.7e-31 139.8 127 60.6
ClCG10G000970 Citrullus lanatus HOM05D001798 ORTHO05D022392 4.2e-27 126.3 95 71.6
ClCG10G000950 Citrullus lanatus HOM05D001798 ORTHO05D022392 3.9e-25 119.8 118 66.1
COL.COLO4_19032 Corchorus olitorius HOM05D001798 ORTHO05D005040 2.2e-12 77.4 125 43.2
Manes.16G135500 Manihot esculenta HOM05D001798 ORTHO05D005040 3.2e-11 73.6 126 45.2
Potri.018G006800 Populus trichocarpa HOM05D001798 ORTHO05D005040 5.5e-11 72.8 87 49.4
QL12p025154 Quercus lobata HOM05D001798 ORTHO05D005040 1.2e-10 71.6 127 42.5
FAN11G1762 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.6e-10 71.2 88 50.0
Atru.chr7.2645 Acer truncatum HOM05D001798 ORTHO05D005040 2.7e-10 70.5 121 43.0
FvH4_3g45900 Fragaria vesca HOM05D001798 ORTHO05D005040 6.1e-10 69.3 121 42.1
FvH4_4g09360 Fragaria vesca HOM05D001798 ORTHO05D005040 7.9e-10 68.9 121 43.0
Gohir.D06G107900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.0e-09 68.6 115 43.5
Prupe.1G087800 Prunus persica HOM05D001798 ORTHO05D005040 1.0e-09 68.6 84 48.8
Ciclev10010310m.g Citrus clementina HOM05D001798 ORTHO05D005040 1.4e-09 68.2 123 43.9
FAN22G0641 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.4e-09 68.2 135 39.3
Ciclev10010207m.g Citrus clementina HOM05D001798 ORTHO05D005040 1.8e-09 67.8 123 43.9
MD12G1161200 Malus domestica HOM05D001798 ORTHO05D005040 1.8e-09 67.8 113 38.9
Sabra18G0014500 Salix brachista HOM05D000280 ORTHO05D006100 1.8e-09 67.8 91 49.5
Cpa.g.sc23.17 Carica papaya HOM05D001798 ORTHO05D005040 5.1e-09 66.2 107 43.0
Lalb_Chr12g0199341 Lupinus albus HOM05D001798 ORTHO05D005040 5.1e-09 66.2 100 44.0
Duzib168G0008 Durio zibethinus HOM05D001798 ORTHO05D005040 6.7e-09 65.9 105 44.8
FAN21G0239 Fragaria x ananassa HOM05D001798 ORTHO05D005040 6.7e-09 65.9 88 47.7
Manes.03G004000 Manihot esculenta HOM05D001798 ORTHO05D005040 8.8e-09 65.5 96 47.9
Eucgr.C02285 Eucalyptus grandis HOM05D001798 ORTHO05D005040 1.1e-08 65.1 116 40.5
RcHm_v2.0_Chr4g0402691 Rosa chinensis HOM05D001798 ORTHO05D005040 1.1e-08 65.1 82 47.6
Sopen11g004390 Solanum pennellii HOM05D001798 ORTHO05D005040 1.1e-08 65.1 72 51.4
CiPaw.08G019800 Carya illinoinensis HOM05D001798 ORTHO05D005040 2.0e-08 64.3 121 43.8
MD13G1257600 Malus domestica HOM05D001798 ORTHO05D005040 2.6e-08 63.9 113 37.2
Solyc11g008600.1 Solanum lycopersicum HOM05D001798 ORTHO05D005040 2.6e-08 63.9 63 58.7
Thecc.09G007300 Theobroma cacao HOM05D001798 ORTHO05D005040 2.6e-08 63.9 89 47.2
Gorai.010G122600 Gossypium raimondii HOM05D001798 ORTHO05D005040 3.3e-08 63.5 118 40.7
Potri.006G273500 Populus trichocarpa HOM05D001798 ORTHO05D005040 3.3e-08 63.5 111 40.5
Potri.006G273566 Populus trichocarpa HOM05D001798 ORTHO05D005040 3.3e-08 63.5 111 40.5
SGA_v2.0_scaffold12G06063 Striga asiatica HOM05D001798 ORTHO05D005040 9.7e-08 62.0 125 39.2
Gohir.A06G105500 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.3e-07 61.6 117 40.2
Peaxi162Scf00296g00124 Petunia axillaris HOM05D001798 ORTHO05D005040 1.3e-07 61.6 55 60.0
RcHm_v2.0_Chr4g0402701 Rosa chinensis HOM05D001798 ORTHO05D005040 1.7e-07 61.2 122 38.5
PGSC0003DMG400016261 Solanum tuberosum HOM05D001798 ORTHO05D005040 2.2e-07 60.8 63 55.6
Duzib187G0913 Durio zibethinus HOM05D001798 ORTHO05D005040 3.7e-07 60.1 116 40.5
Prupe.1G460000 Prunus persica HOM05D001798 ORTHO05D005040 3.7e-07 60.1 124 33.9
SGA_v2.0_scaffold301G47805 Striga asiatica HOM05D000485 ORTHO05D005040 3.7e-07 60.1 124 36.3
Dinv41255 Davidia involucrata HOM05D001798 ORTHO05D004054 4.8e-07 59.7 111 40.5
COL.COLO4_36848 Corchorus olitorius HOM05D001798 ORTHO05D005040 6.3e-07 59.3 84 41.7
CsaV3_1G031530 Cucumis sativus L. HOM05D001798 ORTHO05D005040 8.2e-07 58.9 119 40.3
Glyma.13G095700 Glycine max HOM05D001798 ORTHO05D005040 1.1e-06 58.5 55 60.0
TWI34G0376 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 1.1e-06 58.5 117 41.9
Haze_19626 Corylus avellana HOM05D001798 ORTHO05D005040 1.4e-06 58.2 114 41.2
Haze_21741 Corylus avellana HOM05D001798 ORTHO05D005040 1.4e-06 58.2 127 40.2
Duzib170G0014 Durio zibethinus HOM05D001798 ORTHO05D005040 1.4e-06 58.2 111 36.0
Lj4g0012331 Lotus japonicus HOM05D001798 ORTHO05D005040 1.4e-06 58.2 105 41.9
Sabra06G0211900 Salix brachista HOM05D001798 ORTHO05D005040 1.4e-06 58.2 124 37.9
MSTRG.26226 Avicennia marina HOM05D001798 ORTHO05D005040 1.8e-06 57.8 75 52.0
Haze_21742 Corylus avellana HOM05D001798 ORTHO05D005040 1.8e-06 57.8 127 40.2
CAN.G321.14 Capsicum annuum HOM05D001798 ORTHO05D005040 2.4e-06 57.4 57 56.1
Cfa013271 Carpinus fangiana HOM05D001798 ORTHO05D005040 2.4e-06 57.4 114 43.0
Phvul.003G146800 Phaseolus vulgaris HOM05D001798 ORTHO05D005040 2.4e-06 57.4 38 73.7
VMungo1215G0796 Vigna mungo HOM05D001798 ORTHO05D005040 2.4e-06 57.4 38 73.7
Cfa016621 Carpinus fangiana HOM05D001798 ORTHO05D005040 3.1e-06 57.0 115 39.1
Haze_21738 Corylus avellana HOM05D001798 ORTHO05D005040 3.1e-06 57.0 109 42.2
MELO3C017469.2 Cucumis melo HOM05D001798 ORTHO05D005040 3.1e-06 57.0 117 40.2
Nitab4.5_0004131g0070 Nicotiana tabacum HOM05D001798 ORTHO05D005040 3.1e-06 57.0 38 71.1
ClCG06G013270 Citrullus lanatus HOM05D001798 ORTHO05D005040 4.1e-06 56.6 119 42.0
Duzib150G1419 Durio zibethinus HOM05D001798 ORTHO05D005040 4.1e-06 56.6 111 36.9
Glyma.17G064300 Glycine max HOM05D001798 ORTHO05D005040 4.1e-06 56.6 38 71.1
Medtr4g128470 Medicago truncatula HOM05D001798 ORTHO05D005040 4.1e-06 56.6 35 80.0
Sabra06G0212200 Salix brachista HOM05D001798 ORTHO05D005040 4.1e-06 56.6 77 48.1
CSS0005198 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 5.3e-06 56.2 39 69.2
CSS0011185 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 5.3e-06 56.2 39 69.2
CSS0019887 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 5.3e-06 56.2 39 69.2
CSS0022506 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 5.3e-06 56.2 39 69.2
Cfa013270 Carpinus fangiana HOM05D001798 ORTHO05D005040 5.3e-06 56.2 108 43.5
Rhsim01G0006100 Rhododendron simsii HOM05D001798 ORTHO05D005040 5.3e-06 56.2 41 65.9
Sabra18G0080900 Salix brachista HOM05D001798 ORTHO05D005040 5.3e-06 56.2 40 67.5
FAN27G0855 Fragaria x ananassa HOM05D001798 ORTHO05D005040 7.0e-06 55.8 81 45.7
SalBow1G2776 Salvia bowleyana HOM05D001798 ORTHO05D005040 7.0e-06 55.8 83 50.6
Thecc.09G171700 Theobroma cacao HOM05D001798 ORTHO05D005040 7.0e-06 55.8 111 35.1
CSS0007301 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 9.1e-06 55.5 39 66.7
Migut.K00248 Erythranthe guttata HOM05D001798 ORTHO05D005040 9.1e-06 55.5 73 42.5
FvH4_2g36750 Fragaria vesca HOM05D001798 ORTHO05D005040 9.1e-06 55.5 81 45.7
Gorai.004G100700 Gossypium raimondii HOM05D001798 ORTHO05D005040 9.1e-06 55.5 114 36.8
RcHm_v2.0_Chr1g0336341 Rosa chinensis HOM05D001798 ORTHO05D005040 9.1e-06 55.5 76 47.4
SGA_v2.0_scaffold69G23263 Striga asiatica HOM05D001798 ORTHO05D005040 9.1e-06 55.5 125 36.0


User provided reference genes

Program Settings