Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 8.0e-53 210.3 105 100.0
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 8.0e-29 130.6 101 75.2
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 8.0e-29 130.6 101 75.2
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 1.0e-28 130.2 101 76.2
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 2.7e-16 89.0 103 56.3
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 2.8e-13 79.0 108 47.2
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 2.8e-13 79.0 108 47.2
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 7.5e-11 70.9 116 44.8
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.3e-10 70.1 113 42.5
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.2e-10 69.3 104 45.2
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.9e-10 68.9 128 42.2
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 4.9e-10 68.2 112 41.1
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 8.3e-10 67.4 129 41.1
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 8.3e-10 67.4 128 41.4
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 5.4e-09 64.7 105 39.0
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 7.1e-09 64.3 108 44.4
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 7.1e-09 64.3 120 40.8
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 9.2e-09 63.9 121 36.4
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 9.2e-09 63.9 122 36.9
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 9.2e-09 63.9 114 42.1
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 2.1e-08 62.8 114 41.2
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 2.7e-08 62.4 93 43.0
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 2.7e-08 62.4 111 38.7
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 6.0e-08 61.2 96 44.8
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 6.0e-08 61.2 126 35.7
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 6.0e-08 61.2 105 38.1
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 7.8e-08 60.8 95 42.1
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 7.8e-08 60.8 116 42.2
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 7.8e-08 60.8 115 43.5
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 1.0e-07 60.5 93 44.1
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 1.0e-07 60.5 113 39.8
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 1.3e-07 60.1 121 42.1
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.3e-07 60.1 121 35.5
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 1.7e-07 59.7 100 39.0
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 2.3e-07 59.3 99 44.4
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 2.3e-07 59.3 103 37.9
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 2.3e-07 59.3 109 43.1
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 3.0e-07 58.9 105 39.0
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 3.9e-07 58.5 106 36.8
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.9e-07 58.5 95 42.1
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 3.9e-07 58.5 105 38.1
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 5.1e-07 58.2 102 38.2
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.1e-06 57.0 121 38.8
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 1.1e-06 57.0 111 41.4
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.5e-06 56.6 97 39.2
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.5e-06 56.6 99 41.4
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 2.5e-06 55.8 105 37.1
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.5e-06 55.8 111 42.3
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 2.5e-06 55.8 110 32.7
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 3.3e-06 55.5 94 44.7
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 3.3e-06 55.5 104 37.5
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 4.3e-06 55.1 128 39.1
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 5.6e-06 54.7 140 33.6
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 5.6e-06 54.7 107 39.3
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 7.3e-06 54.3 120 40.0
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 9.5e-06 53.9 122 34.4
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 9.5e-06 53.9 111 44.1
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 9.5e-06 53.9 103 43.7


User provided reference genes

Program Settings