Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 1.2e-36 156.0 77 100.0
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 6.3e-22 107.1 57 91.2
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 8.2e-22 106.7 55 92.7
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 8.2e-22 106.7 55 92.7
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 8.2e-22 106.7 55 92.7
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 8.2e-22 106.7 55 92.7
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 8.2e-22 106.7 55 92.7
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 5.3e-21 104.0 57 89.5
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 2.0e-20 102.1 55 89.1
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 2.6e-20 101.7 54 90.7
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 2.6e-20 101.7 54 90.7
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 2.6e-20 101.7 55 89.1
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 3.4e-20 101.3 55 89.1
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 2.9e-19 98.2 55 85.5
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 3.2e-18 94.7 55 81.8
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 5.5e-18 94.0 52 88.5
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 7.9e-17 90.1 55 78.2
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 1.0e-16 89.7 52 84.6
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 1.8e-16 89.0 53 83.0
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 3.0e-16 88.2 54 81.5
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.9e-16 87.8 52 84.6
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.1e-15 86.3 47 89.4
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 1.1e-15 86.3 47 89.4
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.1e-15 86.3 47 89.4
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.1e-15 86.3 47 89.4
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 9.7e-15 83.2 54 77.8
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.3e-14 82.8 52 80.8
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.6e-14 82.4 55 76.4
CSS0015594 Camellia sinensis var. sinensis HOM05D001966 ORTHO05D010986 3.7e-14 81.3 41 92.7
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 9.1e-13 76.6 51 76.5
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 9.1e-13 76.6 51 72.5
Oeu041412.1 Olea europaea HOM05D001966 ORTHO05D010986 4.5e-12 74.3 52 73.1
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 1.0e-11 73.2 44 79.5
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.0e-11 73.2 45 82.2
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 1.3e-11 72.8 43 79.1
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 6.5e-11 70.5 51 70.6
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.9e-10 68.9 35 91.4
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 1.9e-10 68.9 35 91.4
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.9e-10 68.9 35 91.4
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 1.9e-10 68.9 35 91.4
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 1.9e-10 68.9 35 91.4
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 1.9e-10 68.9 35 91.4
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 1.9e-10 68.9 35 91.4
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 1.2e-09 66.2 45 71.1
Nitab4.5_0009355g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.2e-09 66.2 45 80.0
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 2.1e-09 65.5 32 93.8
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 6.1e-09 63.9 49 67.3
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 6.1e-09 63.9 49 67.3
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 6.1e-09 63.9 49 67.3
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 7.9e-09 63.5 33 87.9
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 7.9e-09 63.5 33 87.9
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 7.9e-09 63.5 33 87.9
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 7.9e-09 63.5 33 87.9
arahy.Tifrunner.gnm1.ann1.MCF6CI Arachis hypogaea HOM05D001966 ORTHO05D010986 1.8e-08 62.4 49 65.3
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 2.3e-08 62.0 33 84.8
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.9e-08 61.2 51 64.7
Psat7g093280 Pisum sativum HOM05D001966 ORTHO05D010986 8.8e-08 60.1 53 62.3
Nitab4.5_0007400g0150 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.5e-07 59.3 51 60.8
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 2.6e-07 58.5 33 81.8
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 3.3e-07 58.2 56 60.7
arahy.Tifrunner.gnm1.ann1.X4EL03 Arachis hypogaea HOM05D001966 ORTHO05D010986 2.2e-06 55.5 33 78.8
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 8.2e-06 53.5 28 89.3


User provided reference genes

Program Settings