Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G021090 Citrullus lanatus HOM05D004793 ORTHO05D004423 3.8e-61 238.0 125 100.0
CsaV3_7G018540 Cucumis sativus L. HOM05D004793 ORTHO05D004423 3.3e-57 224.9 125 94.4
Sed0007585 Sechium edule HOM05D004793 ORTHO05D004423 6.1e-51 204.1 125 87.2
Sed0024469 Sechium edule HOM05D004793 ORTHO05D004423 5.7e-49 197.6 126 88.1
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.5e-20 103.2 126 48.4
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 3.3e-20 102.1 115 48.7
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 3.3e-20 102.1 115 48.7
CiPaw.12G136200 Carya illinoinensis HOM05D004793 ORTHO05D004423 7.3e-20 100.9 126 49.2
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.1e-19 99.4 116 50.9
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.1e-19 99.4 116 51.7
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 5.2e-18 94.7 126 46.8
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 5.2e-18 94.7 125 47.2
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 1.2e-17 93.6 125 45.6
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 2.0e-17 92.8 125 42.4
Gohir.D13G138400 Gossypium hirsutum HOM05D004793 ORTHO05D004423 3.4e-17 92.0 116 47.4
Gorai.013G155000 Gossypium raimondii HOM05D004793 ORTHO05D004423 3.4e-17 92.0 116 47.4
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 9.8e-17 90.5 125 44.8
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 6.4e-16 87.8 127 44.1
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 8.3e-16 87.4 125 44.8
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 1.4e-15 86.7 116 44.8
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 5.4e-15 84.7 125 43.2
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 3.0e-13 79.0 137 39.4
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 6.6e-13 77.8 128 41.4
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 4.3e-12 75.1 118 40.7
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 7.3e-12 74.3 130 41.5
Ciclev10010582m.g Citrus clementina HOM05D004793 ORTHO05D004423 1.6e-11 73.2 119 42.0
Prupe.4G234900 Prunus persica HOM05D004793 ORTHO05D004423 1.6e-11 73.2 136 42.6
RcHm_v2.0_Chr5g0042781 Rosa chinensis HOM05D017646 ORTHO05D004423 2.1e-11 72.8 121 46.3
CSS0013569 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 3.6e-11 72.0 127 41.7
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 4.7e-11 71.6 131 42.0
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 1.1e-10 70.5 125 37.6
Gorai.002G096900 Gossypium raimondii HOM05D004793 ORTHO05D004423 4.0e-10 68.6 95 43.2
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 8.9e-10 67.4 138 37.7
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 4.4e-09 65.1 131 34.4
Potri.011G086300 Populus trichocarpa HOM05D004793 ORTHO05D004423 5.8e-09 64.7 109 33.9
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 7.5e-09 64.3 138 37.0
FAN16G3200 Fragaria x ananassa HOM05D017646 ORTHO05D004423 2.2e-08 62.8 123 41.5
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 2.9e-08 62.4 126 37.3
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 2.9e-08 62.4 140 34.3
FAN21G3338 Fragaria x ananassa HOM05D017646 ORTHO05D004423 4.9e-08 61.6 132 41.7
FAN25G0781 Fragaria x ananassa HOM05D017646 ORTHO05D004423 8.3e-08 60.8 123 40.7
FAN25G3449 Fragaria x ananassa HOM05D017646 ORTHO05D004423 8.3e-08 60.8 123 40.7
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 8.3e-08 60.8 126 36.5
FvH4_3g24120 Fragaria vesca HOM05D017646 ORTHO05D004423 1.1e-07 60.5 122 41.8
FAN11G0385 Fragaria x ananassa HOM05D017646 ORTHO05D004423 1.1e-07 60.5 122 41.8
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 1.1e-07 60.5 128 37.5
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 1.9e-07 59.7 128 37.5
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 2.4e-07 59.3 136 33.8
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 2.4e-07 59.3 138 32.6
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 2.4e-07 59.3 135 34.8
CiPaw.10G079700 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.2e-07 58.9 143 33.6
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 3.2e-07 58.9 128 37.5
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 3.2e-07 58.9 128 37.5
Thecc.06G236700 Theobroma cacao HOM05D004793 ORTHO05D004423 3.2e-07 58.9 124 37.9
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 4.1e-07 58.5 139 33.1
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 5.4e-07 58.2 132 37.1
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 7.1e-07 57.8 139 36.0
QL05p068371 Quercus lobata HOM05D004793 ORTHO05D004423 7.1e-07 57.8 138 32.6
DCAR_030858 Daucus carota HOM05D004793 ORTHO05D004423 2.7e-06 55.8 128 33.6
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 3.5e-06 55.5 129 35.7
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 4.6e-06 55.1 136 35.3
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 6.0e-06 54.7 118 39.0
Eucgr.K00650 Eucalyptus grandis HOM05D004793 ORTHO05D004423 6.0e-06 54.7 131 33.6
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 6.0e-06 54.7 119 38.7


User provided reference genes

Program Settings