Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G020820 Citrullus lanatus HOM05D006851 ORTHO05D008844 3.3e-56 221.5 110 100.0
ClCG09G020830 Citrullus lanatus HOM05D006851 ORTHO05D008844 6.1e-47 190.7 95 97.9
MELO3C014448.2 Cucumis melo HOM05D006851 ORTHO05D008844 3.7e-36 154.8 99 78.8
CsaV3_6G037870 Cucumis sativus L. HOM05D006851 ORTHO05D008844 7.8e-34 147.1 96 77.1
Sed0012320 Sechium edule HOM05D006851 ORTHO05D008844 5.2e-30 134.4 85 75.3
Atru.chr1.3299 Acer truncatum HOM05D006851 ORTHO05D008844 2.7e-18 95.5 106 50.9
Atru.chr6.2752 Acer truncatum HOM05D006851 ORTHO05D008844 2.3e-17 92.4 93 54.8
CiPaw.04G128500 Carya illinoinensis HOM05D006851 ORTHO05D008844 9.6e-16 87.0 88 55.7
Prupe.3G112500 Prunus persica HOM05D006851 ORTHO05D008844 9.6e-16 87.0 95 53.7
FAN14G0067 Fragaria x ananassa HOM05D006851 ORTHO05D008844 1.2e-15 86.7 91 49.5
FAN09G4077 Fragaria x ananassa HOM05D006851 ORTHO05D008844 2.1e-15 85.9 82 53.7
FvH4_6g27820 Fragaria vesca HOM05D006851 ORTHO05D008844 2.8e-15 85.5 91 49.5
RcHm_v2.0_Chr2g0131101 Rosa chinensis HOM05D006851 ORTHO05D008844 1.1e-14 83.6 91 48.4
Cpa.g.sc483.1 Carica papaya HOM05D006851 ORTHO05D008844 2.4e-14 82.4 99 49.5
MD17G1263400 Malus domestica HOM05D006851 ORTHO05D008844 2.4e-14 82.4 85 54.1
Ciclev10016542m.g Citrus clementina HOM05D006851 ORTHO05D008844 1.5e-13 79.7 97 50.5
CANSAT64G1521 Cannabis sativa HOM05D006851 ORTHO05D008844 1.3e-12 76.6 100 53.0
PGR142G1684 Punica granatum HOM05D006851 ORTHO05D008844 2.2e-12 75.9 95 47.4
Haze_13231 Corylus avellana HOM05D006851 ORTHO05D008844 2.9e-12 75.5 88 53.4
MD09G1234300 Malus domestica HOM05D006851 ORTHO05D008844 2.9e-12 75.5 93 48.4
Thecc.01G154800 Theobroma cacao HOM05D006851 ORTHO05D008844 6.4e-12 74.3 91 51.6
Cfa014654 Carpinus fangiana HOM05D006851 ORTHO05D008844 1.9e-11 72.8 88 52.3
Aa31LG1G24530 Aethionema arabicum HOM05D006851 ORTHO05D008844 4.2e-11 71.6 89 50.6
THA.LOC104803044 Tarenaya hassleriana HOM05D006851 ORTHO05D008844 4.2e-11 71.6 92 45.7
PGSC0003DMG400017313 Solanum tuberosum HOM05D006851 ORTHO05D008844 5.4e-11 71.2 78 52.6
Actinidia24403 Actinidia chinensis HOM05D006851 ORTHO05D008844 7.1e-11 70.9 86 48.8
arahy.Tifrunner.gnm1.ann1.WV2S1U Arachis hypogaea HOM05D006851 ORTHO05D008844 1.2e-10 70.1 95 45.3
Dinv06196 Davidia involucrata HOM05D006851 ORTHO05D008844 1.2e-10 70.1 102 48.0
COL.COLO4_33621 Corchorus olitorius HOM05D006851 ORTHO05D008844 1.6e-10 69.7 88 44.3
VMungo1127G1292 Vigna mungo HOM05D006851 ORTHO05D008844 1.6e-10 69.7 76 52.6
Gohir.A12G091300 Gossypium hirsutum HOM05D006851 ORTHO05D008844 2.1e-10 69.3 91 49.5
Gorai.008G099400 Gossypium raimondii HOM05D006851 ORTHO05D008844 2.1e-10 69.3 91 49.5
Lalb_Chr03g0029611 Lupinus albus HOM05D006851 ORTHO05D008844 2.1e-10 69.3 87 49.4
Sopen07g026880 Solanum pennellii HOM05D006851 ORTHO05D008844 3.5e-10 68.6 79 48.1
Dinv00450 Davidia involucrata HOM05D006851 ORTHO05D008844 4.6e-10 68.2 96 47.9
Peaxi162Scf00469g00629 Petunia axillaris HOM05D006851 ORTHO05D008844 6.0e-10 67.8 93 44.1
Phvul.011G124700 Phaseolus vulgaris HOM05D006851 ORTHO05D008844 6.0e-10 67.8 76 52.6
Solyc07g055340.3 Solanum lycopersicum HOM05D006851 ORTHO05D008844 6.0e-10 67.8 79 46.8
Thhalv10017191m.g Eutrema salsugineum HOM05D006851 ORTHO05D008844 7.8e-10 67.4 88 45.5
Manes.02G088700 Manihot esculenta HOM05D006851 ORTHO05D008844 1.0e-09 67.0 74 51.4
AL4G41380 Arabidopsis lyrata HOM05D006851 ORTHO05D008844 1.7e-09 66.2 89 46.1
Gohir.D12G091800 Gossypium hirsutum HOM05D006851 ORTHO05D008844 2.3e-09 65.9 91 48.4
Nitab4.5_0000249g0050 Nicotiana tabacum HOM05D006851 ORTHO05D008844 3.0e-09 65.5 86 46.5
CAN.G1360.8 Capsicum annuum HOM05D006851 ORTHO05D008844 5.1e-09 64.7 83 47.0
Eucgr.K01172 Eucalyptus grandis HOM05D006851 ORTHO05D008844 5.1e-09 64.7 93 47.3
Lsat_1_v5_gn_4_64780 Lactuca sativa HOM05D006851 ORTHO05D008844 1.1e-08 63.5 91 46.2
TWI59G1351 Tripterygium wilfordii HOM05D006851 ORTHO05D008844 1.9e-08 62.8 76 46.1
CARHR137850 Cardamine hirsuta HOM05D006851 ORTHO05D008844 2.5e-08 62.4 89 43.8
Hma1.2p1_0178F.1_g078440 Hydrangea macrophylla HOM05D006851 ORTHO05D008844 2.5e-08 62.4 85 44.7
Nitab4.5_0005922g0060 Nicotiana tabacum HOM05D006851 ORTHO05D008844 2.5e-08 62.4 86 45.3
HanXRQChr14g0455141 Helianthus annuus HOM05D006851 ORTHO05D008844 3.3e-08 62.0 102 47.1
QL08p039990 Quercus lobata HOM05D006851 ORTHO05D008844 3.3e-08 62.0 84 45.2
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 3.3e-08 62.0 100 47.0
GSVIVG01020766001 Vitis vinifera HOM05D006851 ORTHO05D008844 3.3e-08 62.0 82 46.3
SalBow7G2485 Salvia bowleyana HOM05D006851 ORTHO05D008844 4.3e-08 61.6 68 48.5
Sabra10G0010500 Salix brachista HOM05D006851 ORTHO05D008844 1.3e-07 60.1 87 41.4
TPR.G9347 Trifolium pratense HOM05D006851 ORTHO05D008844 1.3e-07 60.1 78 46.2
Aqoxy4G00244 Aquilegia oxysepala HOM05D006851 ORTHO05D008844 1.6e-07 59.7 72 48.6
Lj1A675G56 Lonicera japonica HOM05D006851 ORTHO05D008844 2.1e-07 59.3 100 42.0
Duzib187G0166 Durio zibethinus HOM05D006851 ORTHO05D008844 2.8e-07 58.9 91 47.3
Migut.M00236 Erythranthe guttata HOM05D006851 ORTHO05D008844 2.8e-07 58.9 92 43.5
Oeu020925.1 Olea europaea HOM05D006851 ORTHO05D008844 2.8e-07 58.9 74 51.4
Medtr4g078760 Medicago truncatula HOM05D006851 ORTHO05D008844 4.8e-07 58.2 105 41.0
Nn3g21095 Nelumbo nucifera HOM05D006851 ORTHO05D008844 6.2e-07 57.8 78 46.2
Psat7g167960 Pisum sativum HOM05D006851 ORTHO05D008844 6.2e-07 57.8 105 41.0
AT2G42770 Arabidopsis thaliana HOM05D006851 ORTHO05D008844 8.1e-07 57.4 90 43.3
PSO170G1219 Papaver somniferum HOM05D006851 ORTHO05D008844 8.1e-07 57.4 77 46.8
C04p69910 Brassica napus HOM05D006851 ORTHO05D008844 1.1e-06 57.0 95 38.9
BolC4t28490H Brassica oleracea HOM05D006851 ORTHO05D008844 1.1e-06 57.0 95 38.9
A04p32390 Brassica napus HOM05D006851 ORTHO05D008844 1.4e-06 56.6 95 38.9
Ca_18924_v3 Cicer arietinum L. HOM05D006851 ORTHO05D008844 3.1e-06 55.5 100 39.0
BraA04t18692Z Brassica rapa HOM05D006851 ORTHO05D008844 5.3e-06 54.7 95 37.9
BcaC02g07219 Brassica carinata HOM05D000115 ORTHO05D005317 6.9e-06 54.3 95 37.9
Cc05_g08670 Coffea canephora HOM05D006851 ORTHO05D008844 9.0e-06 53.9 78 46.2


User provided reference genes

Program Settings