Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 2.1e-95 352.4 185 100.0
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 2.4e-80 302.4 186 87.1
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 1.1e-75 287.0 174 89.1
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 8.4e-65 250.8 184 74.5
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 8.4e-57 224.2 188 67.0
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 7.1e-56 221.1 187 66.8
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 2.7e-55 219.2 188 66.0
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 1.3e-54 216.9 179 65.9
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.5e-53 213.4 183 64.5
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 3.3e-53 212.2 178 67.4
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 3.3e-53 212.2 183 65.0
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 5.7e-53 211.5 178 63.5
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.3e-52 210.3 182 62.6
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 2.1e-52 209.5 191 61.3
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 4.8e-52 208.4 194 61.3
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 6.3e-52 208.0 198 60.6
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 1.1e-51 207.2 178 66.3
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 1.8e-51 206.5 188 62.8
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 5.3e-51 204.9 178 62.4
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 9.0e-51 204.1 178 62.4
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 9.0e-51 204.1 183 61.7
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 1.2e-50 203.8 180 64.4
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 3.4e-50 202.2 195 59.0
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 4.5e-50 201.8 188 63.3
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 7.6e-50 201.1 190 56.8
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 1.3e-49 200.3 190 62.1
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 2.2e-49 199.5 190 62.1
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 3.8e-49 198.7 188 60.1
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 2.5e-48 196.1 183 59.6
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 2.5e-48 196.1 183 61.2
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 3.2e-48 195.7 187 62.0
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 3.2e-48 195.7 187 62.0
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 3.2e-48 195.7 191 60.7
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 7.2e-48 194.5 178 57.9
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 9.3e-48 194.1 169 63.3
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 9.3e-48 194.1 193 63.7
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 2.7e-47 192.6 178 60.7
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 3.6e-47 192.2 179 60.3
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 3.6e-47 192.2 188 61.2
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 3.6e-47 192.2 187 59.9
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 4.6e-47 191.8 170 58.2
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 4.6e-47 191.8 180 60.6
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 6.1e-47 191.4 167 58.7
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 6.1e-47 191.4 167 58.7
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 7.9e-47 191.0 148 63.5
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 7.9e-47 191.0 173 61.8
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 1.8e-46 189.9 167 60.5
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 2.3e-46 189.5 172 58.1
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 3.0e-46 189.1 190 60.5
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 3.0e-46 189.1 179 59.8
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 3.9e-46 188.7 162 61.1
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 3.9e-46 188.7 188 59.0
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 5.1e-46 188.3 171 60.2
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 1.1e-45 187.2 172 59.3
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 1.1e-45 187.2 183 57.9
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.5e-45 186.8 187 62.0
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.9e-45 186.4 194 57.7
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 2.5e-45 186.0 133 68.4
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 3.3e-45 185.7 189 58.2
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 3.3e-45 185.7 206 53.4
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 3.3e-45 185.7 183 59.0
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 4.3e-45 185.3 183 62.3
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 9.7e-45 184.1 195 52.8
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.3e-44 183.7 162 59.3
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 2.8e-44 182.6 175 55.4
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 2.8e-44 182.6 197 56.9
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 4.8e-44 181.8 187 56.7
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 4.8e-44 181.8 157 60.5
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 6.3e-44 181.4 172 61.6
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 2.4e-43 179.5 189 57.1
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 4.1e-43 178.7 170 58.8
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 4.1e-43 178.7 171 55.0
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 5.3e-43 178.3 177 58.8
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 5.3e-43 178.3 187 59.4
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.3e-41 173.7 194 54.1
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 1.3e-41 173.7 172 56.4
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.7e-41 173.3 127 70.1
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 2.2e-41 172.9 181 52.5
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 6.5e-41 171.4 128 67.2
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 8.5e-41 171.0 115 75.7
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 2.5e-40 169.5 173 59.5
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 4.2e-40 168.7 185 53.5
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 4.2e-40 168.7 185 53.5
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 7.2e-40 167.9 127 66.9
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 5.7e-37 158.3 165 51.5
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 1.7e-36 156.8 187 51.9
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 2.2e-36 156.4 193 49.7
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 3.7e-36 155.6 112 71.4
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 4.8e-36 155.2 87 87.4
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 5.3e-35 151.8 188 51.1
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 9.1e-35 151.0 151 52.3
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 4.5e-34 148.7 92 77.2
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.3e-33 147.1 152 52.6
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 2.2e-33 146.4 149 53.0
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 4.7e-31 138.7 154 50.6
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 1.0e-30 137.5 134 52.2
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 4.4e-29 132.1 146 58.2
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 1.8e-27 126.7 194 45.4
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 2.4e-27 126.3 131 48.9
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 1.6e-26 123.6 147 46.3
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 7.7e-26 121.3 135 57.8
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 6.5e-25 118.2 154 50.0
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 1.2e-23 114.0 186 41.9
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 2.8e-20 102.8 133 51.1
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 4.2e-16 89.0 78 55.1
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 8.8e-14 81.3 114 40.4
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 2.2e-12 76.6 108 40.7


User provided reference genes

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