Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 5.1e-75 284.6 179 100.0
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 4.8e-49 198.4 179 73.2
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 1.0e-46 190.7 180 75.6
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 1.4e-43 180.3 166 71.7
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 1.4e-43 180.3 166 71.7
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 2.0e-42 176.4 186 72.6
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.8e-19 100.1 167 46.7
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 5.2e-19 98.6 170 48.8
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 1.5e-18 97.1 160 48.1
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 9.8e-18 94.4 167 40.7
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 1.3e-17 94.0 150 43.3
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 3.7e-17 92.4 167 47.3
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 1.4e-16 90.5 159 41.5
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 4.1e-16 89.0 167 37.7
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 4.1e-16 89.0 147 42.9
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 7.0e-16 88.2 157 40.8
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 1.6e-15 87.0 149 45.6
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 1.6e-15 87.0 151 41.7
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.3e-14 84.0 165 39.4
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 1.7e-14 83.6 175 39.4
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 2.9e-14 82.8 191 39.3
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 6.5e-14 81.6 175 50.3
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 1.9e-13 80.1 147 49.7
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 5.5e-13 78.6 149 36.9
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 7.2e-13 78.2 178 40.4
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 1.6e-12 77.0 174 47.7
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 1.6e-12 77.0 173 43.4
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 4.7e-12 75.5 174 39.1
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 8.0e-12 74.7 171 40.4
Atru.chr8.2473 Acer truncatum HOM05D007804 ORTHO05D009828 1.0e-11 74.3 181 48.6
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 2.3e-11 73.2 166 36.1
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 2.3e-11 73.2 154 35.7
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 2.3e-11 73.2 172 35.5
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 3.0e-11 72.8 205 42.9
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 4.0e-11 72.4 136 38.2
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 6.8e-11 71.6 158 34.8
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 8.8e-11 71.2 146 39.7
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 1.2e-10 70.9 140 37.9
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.2e-10 70.9 140 37.9
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 1.2e-10 70.9 155 37.4
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 1.5e-10 70.5 177 36.2
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.0e-10 70.1 140 37.1
Lalb_Chr02g0159931 Lupinus albus HOM05D007804 ORTHO05D009828 2.0e-10 70.1 180 41.1
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 2.0e-10 70.1 157 35.0
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 2.6e-10 69.7 156 37.8
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 2.6e-10 69.7 173 33.5
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 3.4e-10 69.3 160 35.6
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 4.4e-10 68.9 145 37.2
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 5.7e-10 68.6 166 34.3
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 7.5e-10 68.2 140 35.7
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 7.5e-10 68.2 160 35.6
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 9.8e-10 67.8 174 42.5
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 1.7e-09 67.0 185 47.0
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 1.4e-08 63.9 186 32.8
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 1.4e-08 63.9 165 35.2
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 1.8e-08 63.5 147 41.5
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 3.1e-08 62.8 145 32.4
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 4.1e-08 62.4 166 31.9
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 4.1e-08 62.4 165 37.6
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 4.1e-08 62.4 141 36.2
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 5.4e-08 62.0 197 30.5
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 5.4e-08 62.0 138 42.8
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 1.6e-07 60.5 170 32.4
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 4.5e-07 58.9 194 29.4
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 4.5e-07 58.9 169 31.4
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 5.9e-07 58.5 186 31.7
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 7.7e-07 58.2 155 34.2
AL5G18030 Arabidopsis lyrata HOM05D007804 ORTHO05D009828 1.7e-06 57.0 192 29.7
Nn4g22964 Nelumbo nucifera HOM05D007804 ORTHO05D009828 2.3e-06 56.6 165 35.8
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 2.9e-06 56.2 157 36.3
Carub.0005s0691 Capsella rubella HOM05D007804 ORTHO05D009828 3.8e-06 55.8 166 32.5
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 5.0e-06 55.5 195 28.7
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 5.0e-06 55.5 195 28.7
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 6.6e-06 55.1 189 29.6
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 6.6e-06 55.1 189 29.6
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 6.6e-06 55.1 189 29.6
Thhalv10004896m.g Eutrema salsugineum HOM05D007804 ORTHO05D009828 6.6e-06 55.1 191 27.2


User provided reference genes

Program Settings