Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G015660 Citrullus lanatus HOM05D000361 ORTHO05D008190 7.4e-62 240.4 120 100.0
ClCG09G015670 Citrullus lanatus HOM05D000361 ORTHO05D008190 1.2e-43 179.9 87 98.9
CsaV3_7G006750 Cucumis sativus L. HOM05D000361 ORTHO05D008190 1.7e-42 176.0 87 96.6
MELO3C018619.2 Cucumis melo HOM05D000361 ORTHO05D008190 2.2e-42 175.6 87 96.6
Sed0008836 Sechium edule HOM05D000361 ORTHO05D008190 5.0e-42 174.5 87 94.3
Prupe.8G065100 Prunus persica HOM05D000361 ORTHO05D008190 1.1e-41 173.3 87 93.1
CiPaw.05G032700 Carya illinoinensis HOM05D000361 ORTHO05D008190 3.2e-41 171.8 87 89.7
Ciclev10029860m.g Citrus clementina HOM05D000361 ORTHO05D008190 5.5e-41 171.0 87 90.8
RcHm_v2.0_Chr6g0267231 Rosa chinensis HOM05D000361 ORTHO05D008190 5.5e-41 171.0 97 82.5
FAN15G1148 Fragaria x ananassa HOM05D000361 ORTHO05D008190 9.4e-41 170.2 97 80.4
MD05G1047800 Malus domestica HOM05D000361 ORTHO05D008190 1.2e-40 169.9 87 90.8
GSVIVG01022631001 Vitis vinifera HOM05D000361 ORTHO05D008190 1.6e-40 169.5 111 75.7
FvH4_2g10130 Fragaria vesca HOM05D000361 ORTHO05D008190 2.1e-40 169.1 97 80.4
Atru.chr6.1214 Acer truncatum HOM05D000361 ORTHO05D008190 2.7e-40 168.7 87 87.4
Lj9A350G62 Lonicera japonica HOM05D000361 ORTHO05D008190 2.7e-40 168.7 110 75.5
Duzib052G0813 Durio zibethinus HOM05D003001 ORTHO05D008190 3.6e-40 168.3 87 87.4
TWI14G0190 Tripterygium wilfordii HOM05D000361 ORTHO05D008190 4.7e-40 167.9 101 77.2
FAN24G1062 Fragaria x ananassa HOM05D000361 ORTHO05D008190 6.1e-40 167.5 97 79.4
Nitab4.5_0003959g0050 Nicotiana tabacum HOM05D000361 ORTHO05D008190 6.1e-40 167.5 87 88.5
Potri.019G014403 Populus trichocarpa HOM05D000361 ORTHO05D008190 6.1e-40 167.5 101 76.2
Sabra19G0028800 Salix brachista HOM05D000361 ORTHO05D008190 7.9e-40 167.2 101 77.2
MSTRG.20289 Avicennia marina HOM05D000361 ORTHO05D008190 1.0e-39 166.8 106 76.4
Nitab4.5_0000863g0120 Nicotiana tabacum HOM05D000361 ORTHO05D008190 1.0e-39 166.8 87 89.7
Carub.0003s2831 Capsella rubella HOM05D000361 ORTHO05D008190 1.8e-39 166.0 106 74.5
Manes.10G104300 Manihot esculenta HOM05D000361 ORTHO05D008190 1.8e-39 166.0 87 87.4
THA.LOC104819509 Tarenaya hassleriana HOM05D000361 ORTHO05D008190 1.8e-39 166.0 106 72.6
PSO541G0659 Papaver somniferum HOM05D000361 ORTHO05D008190 2.3e-39 165.6 87 85.1
PSO541G1218 Papaver somniferum HOM05D000361 ORTHO05D008190 2.3e-39 165.6 87 85.1
Solyc01g105520.3 Solanum lycopersicum HOM05D000361 ORTHO05D008190 3.0e-39 165.2 87 86.2
Sopen01g047990 Solanum pennellii HOM05D000361 ORTHO05D008190 3.0e-39 165.2 87 86.2
Thecc.02G134000 Theobroma cacao HOM05D000361 ORTHO05D008190 3.0e-39 165.2 87 87.4
COL.COLO4_32315 Corchorus olitorius HOM05D000361 ORTHO05D008190 3.9e-39 164.9 87 86.2
Gohir.A12G016000 Gossypium hirsutum HOM05D000361 ORTHO05D008190 3.9e-39 164.9 87 85.1
SalBow5G3846 Salvia bowleyana HOM05D000361 ORTHO05D008190 6.7e-39 164.1 97 77.3
AT2G14050 Arabidopsis thaliana HOM05D000361 ORTHO05D008190 8.8e-39 163.7 106 74.5
Thhalv10022581m.g Eutrema salsugineum HOM05D000361 ORTHO05D008190 8.8e-39 163.7 106 74.5
Oeu022079.1 Olea europaea HOM05D000361 ORTHO05D008190 8.8e-39 163.7 87 86.2
Peaxi162Scf01060g00132 Petunia axillaris HOM05D000361 ORTHO05D008190 8.8e-39 163.7 111 73.9
Gohir.D12G016300 Gossypium hirsutum HOM05D000361 ORTHO05D008190 1.1e-38 163.3 87 83.9
Gorai.008G016500 Gossypium raimondii HOM05D000361 ORTHO05D008190 1.1e-38 163.3 87 83.9
Migut.B00581 Erythranthe guttata HOM05D000361 ORTHO05D008190 1.5e-38 162.9 111 72.1
Hma1.2p1_0784F.1_g217170 Hydrangea macrophylla HOM05D000361 ORTHO05D008190 1.5e-38 162.9 111 73.9
Hma1.2p1_0784F.1_g217180 Hydrangea macrophylla HOM05D000361 ORTHO05D008190 1.5e-38 162.9 111 73.9
Phvul.006G204900 Phaseolus vulgaris HOM05D000361 ORTHO05D008190 1.5e-38 162.9 87 85.1
PGSC0003DMG400012572 Solanum tuberosum HOM05D000361 ORTHO05D008190 1.5e-38 162.9 87 85.1
CAN.G523.41 Capsicum annuum HOM05D000361 ORTHO05D008190 2.0e-38 162.5 87 83.9
PSO675G7150 Papaver somniferum HOM05D000361 ORTHO05D008190 2.6e-38 162.2 87 83.9
Actinidia24006 Actinidia chinensis HOM05D000361 ORTHO05D008190 3.3e-38 161.8 111 71.2
AL3G45720 Arabidopsis lyrata HOM05D000361 ORTHO05D008190 3.3e-38 161.8 106 73.6
BcaB08g34549 Brassica carinata HOM05D000361 ORTHO05D008190 3.3e-38 161.8 106 74.5
BcaC01g03107 Brassica carinata HOM05D000361 ORTHO05D008190 3.3e-38 161.8 106 74.5
A03p45130 Brassica napus HOM05D000361 ORTHO05D008190 3.3e-38 161.8 106 74.5
C03p55990 Brassica napus HOM05D000361 ORTHO05D008190 3.3e-38 161.8 106 74.5
BolC3t17883H Brassica oleracea HOM05D000361 ORTHO05D008190 3.3e-38 161.8 106 74.5
BraA03t13648Z Brassica rapa HOM05D000361 ORTHO05D008190 3.3e-38 161.8 106 74.5
TAR376G0717 Trochodendron aralioides HOM05D000361 ORTHO05D008190 4.4e-38 161.4 111 72.1
Cc02_g21180 Coffea canephora HOM05D000361 ORTHO05D008190 5.7e-38 161.0 97 77.3
Lalb_Chr20g0122951 Lupinus albus HOM05D000361 ORTHO05D008190 5.7e-38 161.0 87 86.2
SHI20334 Sapria himalayana HOM05D000361 ORTHO05D008190 5.7e-38 161.0 87 85.1
CARHR104240 Cardamine hirsuta HOM05D000361 ORTHO05D008190 7.4e-38 160.6 106 73.6
Sc08g0003720 Simmondsia chinensis HOM05D000361 ORTHO05D008190 7.4e-38 160.6 111 71.2
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 7.4e-38 160.6 87 85.1
vmacro01841 Vaccinium macrocarpon HOM05D000361 ORTHO05D008190 7.4e-38 160.6 111 70.3
Aa31LG8G12490 Aethionema arabicum HOM05D000361 ORTHO05D008190 9.7e-38 160.2 106 72.6
Hund00081 Selenicereus undatus HOM05D000361 ORTHO05D008190 9.7e-38 160.2 111 70.3
DCAR_021877 Daucus carota HOM05D000361 ORTHO05D008190 1.3e-37 159.8 106 71.7
SGA_v2.0_scaffold83G26335 Striga asiatica HOM05D000361 ORTHO05D008190 1.3e-37 159.8 111 71.2
Eucgr.I02634 Eucalyptus grandis HOM05D000361 ORTHO05D008190 1.7e-37 159.5 101 72.3
Sp3g27310 Schrenkiella parvula HOM05D000361 ORTHO05D008190 1.7e-37 159.5 106 72.6
Haze_10576 Corylus avellana HOM05D000361 ORTHO05D008190 3.7e-37 158.3 94 80.9
RhsimUnG0187700 Rhododendron simsii HOM05D000361 ORTHO05D008190 3.7e-37 158.3 111 70.3
Psat1g215840 Pisum sativum HOM05D000361 ORTHO05D008190 4.8e-37 157.9 87 82.8
RhsimUnG0105100 Rhododendron simsii HOM05D000361 ORTHO05D008190 4.8e-37 157.9 111 69.4
CSS0016473 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008190 6.3e-37 157.5 111 69.4
Lsat_1_v5_gn_9_116821 Lactuca sativa HOM05D000361 ORTHO05D008190 6.3e-37 157.5 87 82.8
Nn5g29999 Nelumbo nucifera HOM05D000361 ORTHO05D008190 6.3e-37 157.5 111 69.4
Medtr2g009190 Medicago truncatula HOM05D000361 ORTHO05D008190 8.2e-37 157.1 87 81.6
PGR142G0624 Punica granatum HOM05D000361 ORTHO05D008190 8.2e-37 157.1 87 82.8
Lj6g0015129 Lotus japonicus HOM05D000361 ORTHO05D008190 1.1e-36 156.8 87 82.8
Glyma.15G055000 Glycine max HOM05D000361 ORTHO05D008190 2.4e-36 155.6 87 83.9
Aqoxy6G00715 Aquilegia oxysepala HOM05D000361 ORTHO05D008190 4.1e-36 154.8 98 73.5
arahy.Tifrunner.gnm1.ann1.2R0HNS Arachis hypogaea HOM05D000361 ORTHO05D008190 4.1e-36 154.8 88 83.0
arahy.Tifrunner.gnm1.ann1.E9LA23 Arachis hypogaea HOM05D000361 ORTHO05D008190 4.1e-36 154.8 88 83.0
ECA240G4379 Erigeron canadensis HOM05D000361 ORTHO05D008190 5.3e-36 154.5 97 71.1
Ah.01g010080 Amaranthus hybridus HOM05D000361 ORTHO05D008190 9.1e-36 153.7 97 72.2
EL10Ac9g21521 Beta vulgaris HOM05D000361 ORTHO05D008190 1.2e-35 153.3 111 66.7
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 1.5e-35 152.9 106 67.9
ATR0684G185 Amborella trichopoda HOM05D000361 ORTHO05D008190 2.0e-35 152.5 87 75.9
AUR62013162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 2.0e-35 152.5 111 67.6
FAN27G0220 Fragaria x ananassa HOM05D000361 ORTHO05D008190 2.0e-35 152.5 79 87.3
HanXRQChr03g0067551 Helianthus annuus HOM05D000361 ORTHO05D008190 3.5e-35 151.8 97 70.1
Ca_00146_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008190 4.5e-35 151.4 88 80.7
MBI02_g33224_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D008190 5.9e-35 151.0 123 61.8
AUR62010162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 2.9e-34 148.7 111 67.6
SMO356G0083 Selaginella moellendorffii HOM05D000361 ORTHO05D008190 7.2e-33 144.1 97 66.0
SMO013G0030 Selaginella moellendorffii HOM05D000361 ORTHO05D008190 2.7e-32 142.1 112 60.7
SEGI_16098 Sequoiadendron giganteum HOM05D000361 ORTHO05D008190 1.0e-31 140.2 104 66.3
Pp3c8_2220 Physcomitrium patens HOM05D000361 ORTHO05D008190 3.3e-30 135.2 97 63.9
Zm00001eb279300 Zea mays HOM05D000361 ORTHO05D008190 7.4e-30 134.0 101 65.3
Mapoly0080s0056 Marchantia polymorpha HOM05D000361 ORTHO05D008190 4.8e-29 131.3 97 62.9
CBR_g50446 Chara braunii HOM05D000019 ORTHO05D000048 7.7e-27 124.0 104 56.7
AagrBONN_evm.TU.Sc2ySwM_228.3455 Anthoceros agrestis HOM05D000361 ORTHO05D008190 7.2e-25 117.5 97 55.7
HPP92_004763 Vanilla planifolia HOM05D000361 ORTHO05D008190 1.6e-19 99.8 88 60.2
GSVIVG01022626001 Vitis vinifera HOM05D000361 ORTHO05D008190 2.2e-18 95.9 51 90.2
PRCOL_00004832 Prasinoderma coloniale HOM05D000361 ORTHO05D008190 1.0e-10 70.5 54 61.1
Cre12.g540927 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D008190 2.8e-08 62.4 53 52.8
Zm00001eb284360 Zea mays HOM05D000361 ORTHO05D008294 9.8e-06 53.9 107 33.6


User provided reference genes

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