Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G014900 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.4e-81 306.2 150 100.0
CsaV3_2G024670 Cucumis sativus L. HOM05D000004 ORTHO05D000002 7.1e-30 134.4 189 45.0
CsaV3_UNG222510 Cucumis sativus L. HOM05D000004 ORTHO05D000002 3.0e-28 129.0 189 45.0
CsaV3_UNG239520 Cucumis sativus L. HOM05D000004 ORTHO05D000002 1.3e-26 123.6 189 42.3
ClCG11G012200 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.8e-24 114.8 172 41.9
Sed0013504 Sechium edule HOM05D000004 ORTHO05D000002 2.8e-18 95.9 147 41.5
ClCG03G011760 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.5e-16 90.1 160 38.8
ECA240G1063 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-15 85.1 139 37.4
ClCG05G011000 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.5e-14 81.6 134 44.0
ClCG11G000910 Citrullus lanatus HOM05D000004 ORTHO05D000002 7.2e-14 81.3 144 39.6
THA.LOC104814705 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.0e-12 77.4 189 30.2
ClCG02G008780 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.3e-12 76.3 137 36.5
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 8.8e-12 74.3 179 32.4
ClCG08G000510 Citrullus lanatus HOM05D000004 ORTHO05D000002 8.8e-12 74.3 135 39.3
ECA234G0188 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.8e-12 74.3 137 35.0
ClCG05G011900 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.1e-11 73.9 116 40.5
ECA234G4858 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.5e-11 73.6 182 31.9
ECA248G1389 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-11 71.2 135 32.6
ECA233G0465 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-10 70.5 134 33.6
Sp4g07510 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.3e-10 68.2 87 44.8
ECA236G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-09 67.0 135 34.1
FvH4_2g19791 Fragaria vesca HOM05D000004 ORTHO05D000002 4.1e-09 65.5 185 30.8
CANSAT01G0003 Cannabis sativa HOM05D000004 ORTHO05D000002 1.2e-08 63.9 138 31.2
THA.LOC104821586 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.2e-08 63.9 153 30.1
CANSAT80G2866 Cannabis sativa HOM05D000004 ORTHO05D000002 2.0e-08 63.2 140 33.6
Manes.04G037351 Manihot esculenta HOM05D000004 ORTHO05D000002 2.0e-08 63.2 190 28.9
Manes.10G090351 Manihot esculenta HOM05D000004 ORTHO05D000002 2.0e-08 63.2 190 29.5
ClCG02G009630 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.5e-08 62.0 110 38.2
ClCG05G016400 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.5e-08 62.0 186 29.6
Lalb_Chr06g0164571 Lupinus albus HOM05D000004 ORTHO05D000002 4.5e-08 62.0 186 30.1
Sopen03g037800 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-08 62.0 140 31.4
Manes.07G081075 Manihot esculenta HOM05D000004 ORTHO05D000002 5.9e-08 61.6 103 38.8
CSS0026486 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.7e-08 61.2 186 29.0
Sopen11g008450 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-07 60.8 135 33.3
ECA233G0504 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-07 60.5 142 33.8
ECA233G0770 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-07 60.5 102 36.3
RcHm_v2.0_Chr6g0250891 Rosa chinensis HOM05D000004 ORTHO05D000002 1.3e-07 60.5 186 29.0
Sopen08g020120 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-07 60.5 140 32.9
FvH4_3g30934 Fragaria vesca HOM05D000004 ORTHO05D000002 2.9e-07 59.3 191 29.8
Manes.02G187850 Manihot esculenta HOM05D000004 ORTHO05D000002 2.9e-07 59.3 139 30.9
MELO3C031499.2 Cucumis melo HOM05D000004 ORTHO05D000002 3.8e-07 58.9 147 32.0
PSO675G6456 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-07 58.5 183 28.4
ECA232G1905 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-07 58.2 167 30.5
Sopen05g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-07 58.2 87 40.2
FvH4_5g24911 Fragaria vesca HOM05D000004 ORTHO05D000002 8.5e-07 57.8 114 36.0
Lalb_Chr12g0204591 Lupinus albus HOM05D000004 ORTHO05D000002 8.5e-07 57.8 189 27.5
SEGI_20098 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 8.5e-07 57.8 111 36.9
Sopen06g014260 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-07 57.8 140 30.0
ClCG11G007890 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.1e-06 57.4 105 33.3
Sopen11g019720 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.4 140 32.1
Rhsim07G0103000 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.4e-06 57.0 102 33.3
RcHm_v2.0_Chr3g0473251 Rosa chinensis HOM05D000004 ORTHO05D000002 1.4e-06 57.0 187 30.5
TPR.G31865 Trifolium pratense HOM05D000004 ORTHO05D000002 1.4e-06 57.0 105 34.3
Ca_05075_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.9e-06 56.6 149 28.2
MELO3C035148.2 Cucumis melo HOM05D000004 ORTHO05D000002 1.9e-06 56.6 112 33.9
FvH4_3g31635 Fragaria vesca HOM05D000004 ORTHO05D000002 1.9e-06 56.6 140 30.7
FvH4_7g29724 Fragaria vesca HOM05D000004 ORTHO05D000002 3.2e-06 55.8 184 27.7
PSO591G0506 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-06 55.8 152 32.9
RcHm_v2.0_Chr1g0339801 Rosa chinensis HOM05D000004 ORTHO05D000002 3.2e-06 55.8 186 26.9
RcHm_v2.0_Chr2g0098581 Rosa chinensis HOM05D000004 ORTHO05D000002 3.2e-06 55.8 177 28.8
ECA248G3468 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-06 55.5 90 37.8
PSO063G5209 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-06 55.5 140 32.1
RcHm_v2.0_Chr2g0090701 Rosa chinensis HOM05D000004 ORTHO05D000002 4.2e-06 55.5 86 41.9
RcHm_v2.0_Chr5g0053791 Rosa chinensis HOM05D000004 ORTHO05D000002 4.2e-06 55.5 86 41.9
SHI03815 Sapria himalayana HOM05D000004 ORTHO05D000002 4.2e-06 55.5 135 31.9
Sopen04g007630 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-06 55.5 135 30.4
Manes.16G001601 Manihot esculenta HOM05D000004 ORTHO05D000002 5.5e-06 55.1 177 28.2
PSO541G5761 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-06 55.1 144 28.5
RcHm_v2.0_Chr2g0109491 Rosa chinensis HOM05D000004 ORTHO05D000002 5.5e-06 55.1 86 40.7
RcHm_v2.0_Chr3g0457081 Rosa chinensis HOM05D000004 ORTHO05D000002 5.5e-06 55.1 86 40.7
Sopen01g025150 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-06 55.1 135 30.4
PSO541G5600 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-06 54.7 175 29.1
Ca_27450_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.4e-06 54.3 136 30.9
RcHm_v2.0_Chr4g0401391 Rosa chinensis HOM05D000004 ORTHO05D000002 9.4e-06 54.3 87 39.1
Sopen01g013800 Solanum pennellii HOM05D000004 ORTHO05D000002 9.4e-06 54.3 135 30.4


User provided reference genes

Program Settings