Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 2.1e-288 995.0 482 100.0
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 7.1e-273 943.3 480 94.2
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.2e-267 926.0 469 94.9
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 6.2e-261 903.7 480 91.2
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 6.1e-240 833.9 486 82.5
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 7.9e-240 833.6 482 81.7
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 6.7e-239 830.5 480 82.3
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.9e-238 828.9 480 82.3
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 4.2e-233 811.2 495 78.2
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 5.5e-233 810.8 480 79.6
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 7.2e-233 810.4 495 78.2
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 6.1e-232 807.4 488 79.1
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 7.9e-232 807.0 485 80.6
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 1.8e-231 805.8 485 80.4
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 7.4e-230 800.4 480 80.4
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 3.7e-229 798.1 480 79.2
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 1.1e-228 796.6 487 79.1
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 2.4e-228 795.4 480 79.8
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.1e-228 794.7 480 78.5
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 3.4e-227 791.6 485 79.4
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 3.4e-227 791.6 576 68.4
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 7.7e-227 790.4 480 78.1
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.0e-226 790.0 480 78.1
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 1.7e-226 789.3 484 78.3
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.7e-226 789.3 487 77.6
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.8e-226 788.1 480 77.9
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 5.0e-226 787.7 484 78.3
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.0e-226 787.7 480 77.9
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 8.5e-226 786.9 483 78.7
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 1.1e-225 786.6 487 78.0
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 1.4e-225 786.2 487 78.0
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 1.9e-225 785.8 483 77.6
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 4.2e-225 784.6 484 77.9
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 5.5e-225 784.3 484 78.5
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.2e-224 783.1 480 77.7
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 1.2e-224 783.1 491 76.2
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 2.7e-224 781.9 488 77.5
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 2.7e-224 781.9 480 77.1
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.4e-223 779.6 487 77.0
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 2.3e-223 778.9 483 76.8
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 3.9e-223 778.1 509 75.8
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 1.5e-222 776.2 481 76.9
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 5.7e-222 774.2 486 77.6
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.7e-221 772.7 484 77.1
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 2.2e-221 772.3 480 76.9
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 8.2e-221 770.4 485 76.7
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 1.1e-220 770.0 491 75.6
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 1.8e-220 769.2 484 77.1
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 3.1e-220 768.5 482 76.3
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 5.3e-220 767.7 484 77.1
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 9.1e-220 766.9 482 75.9
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.2e-219 766.5 498 75.1
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.2e-219 766.5 480 76.5
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 2.0e-219 765.8 480 76.2
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 7.7e-219 763.8 491 75.2
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 2.9e-218 761.9 461 78.7
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 3.2e-217 758.4 483 75.6
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 5.5e-217 757.7 481 76.9
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 1.2e-216 756.5 482 75.7
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 3.6e-216 755.0 488 74.0
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 3.6e-216 755.0 483 74.7
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 8.0e-216 753.8 480 75.6
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 8.0e-216 753.8 518 71.2
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 1.0e-215 753.4 480 74.8
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 1.8e-215 752.7 482 75.3
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 2.3e-215 752.3 488 74.6
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 6.7e-215 750.7 467 77.7
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 1.2e-214 750.0 572 66.1
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 2.0e-214 749.2 491 72.9
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 5.7e-214 747.7 480 73.8
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 5.7e-214 747.7 480 74.6
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 7.5e-214 747.3 480 73.8
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 1.7e-213 746.1 481 75.7
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 1.7e-213 746.1 480 74.8
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 1.7e-213 746.1 491 73.7
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 2.8e-213 745.3 480 75.0
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 3.7e-213 745.0 480 74.8
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 8.2e-213 743.8 480 74.2
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 1.4e-212 743.0 480 74.6
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 4.1e-212 741.5 480 74.4
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 5.3e-212 741.1 480 74.4
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 7.0e-212 740.7 485 74.0
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.2e-211 740.0 480 74.0
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.2e-211 740.0 480 74.0
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 4.5e-211 738.0 480 74.0
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 1.7e-210 736.1 480 74.2
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 3.8e-210 734.9 480 73.3
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 3.8e-210 734.9 487 73.3
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 5.0e-210 734.6 473 74.4
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 8.5e-210 733.8 564 66.1
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 1.1e-209 733.4 480 73.5
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 1.5e-209 733.0 483 73.1
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 2.1e-208 729.2 485 73.0
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 3.0e-207 725.3 487 73.1
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 5.2e-207 724.5 504 70.4
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 1.1e-204 716.8 480 74.4
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.3e-202 709.1 569 62.7
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 7.2e-201 704.1 411 81.0
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.8e-199 699.5 594 60.1
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 1.8e-196 689.5 489 69.5
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 2.4e-196 689.1 480 69.0
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 1.6e-195 686.4 504 68.3
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.6e-192 676.4 540 63.7
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 2.6e-190 669.1 411 78.3
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.3e-189 666.8 448 73.9
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 1.1e-180 637.1 411 74.7
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 4.7e-176 621.7 375 78.4
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 1.1e-175 620.5 485 62.3
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.8e-175 619.8 429 69.7
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 3.1e-175 619.0 360 82.5
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 2.4e-172 609.4 485 61.9
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 5.4e-172 608.2 492 58.7
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.3e-170 602.8 296 96.3
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 6.8e-167 591.3 373 75.1
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 3.8e-165 585.5 373 74.5
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 2.5e-161 572.8 327 84.1
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 4.7e-160 568.5 327 82.9
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 9.0e-159 564.3 342 78.1
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.5e-158 563.5 481 57.8
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.2e-157 559.7 327 81.3
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 4.6e-147 525.4 328 77.4
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 2.5e-145 519.6 319 78.7
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 3.3e-145 519.2 361 71.5
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 4.3e-145 518.8 333 76.6
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.9e-137 493.4 350 69.4
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 7.9e-131 471.5 327 72.5
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.3e-125 454.1 222 96.8
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 4.8e-96 355.9 210 81.9
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 6.3e-96 355.5 453 42.8
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 9.1e-95 351.7 380 47.6
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 6.3e-88 328.9 159 96.2
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 6.3e-88 328.9 159 96.2
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 9.1e-87 325.1 228 67.5
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 2.3e-85 320.5 434 42.2
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.9e-85 320.1 159 95.0
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.6e-81 307.0 186 80.6
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 2.8e-67 260.4 136 85.3
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 8.3e-56 222.2 415 35.9
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 6.0e-54 216.1 106 97.2
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.1e-46 191.0 94 94.7
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.5e-46 190.3 93 95.7
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 8.1e-43 179.1 106 79.2
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 3.2e-39 167.2 139 57.6
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 4.2e-39 166.8 119 71.4
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 5.3e-34 149.8 91 75.8
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 6.7e-29 132.9 65 96.9
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.2e-22 112.1 67 77.6
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.9e-20 104.8 76 69.7
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 4.3e-20 103.6 69 68.1
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 5.7e-20 103.2 87 57.5
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 3.3e-12 77.4 69 58.0
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 8.5e-08 62.8 33 81.8


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