Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.1e-66 254.2 124 100.0
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 9.4e-36 153.7 80 93.8
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 2.1e-35 152.5 80 93.8
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 5.7e-33 144.4 80 85.0
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.5e-30 135.2 79 78.5
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 2.2e-29 132.5 79 74.7
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 3.8e-29 131.7 79 73.4
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 8.5e-29 130.6 79 73.4
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 8.5e-29 130.6 79 72.2
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 8.5e-29 130.6 79 74.7
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 5.5e-28 127.9 79 74.7
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 7.2e-28 127.5 78 71.8
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 7.2e-28 127.5 78 74.4
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 7.2e-28 127.5 78 74.4
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 7.2e-28 127.5 78 74.4
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.1e-27 125.9 78 74.4
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.1e-27 125.9 79 72.2
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 3.6e-27 125.2 79 73.4
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 3.6e-27 125.2 79 68.4
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 8.0e-27 124.0 79 69.6
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 8.0e-27 124.0 79 69.6
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.0e-26 123.6 82 70.7
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.0e-26 123.6 79 68.4
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.0e-26 123.6 79 67.1
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.4e-26 123.2 79 72.2
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.4e-26 123.2 79 69.6
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 1.4e-26 123.2 79 70.9
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.8e-26 122.9 79 65.8
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.8e-26 122.9 80 68.8
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 2.3e-26 122.5 82 69.5
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.0e-26 122.1 78 70.5
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 4.0e-26 121.7 79 67.1
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 4.0e-26 121.7 79 65.8
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 4.0e-26 121.7 82 68.3
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 4.0e-26 121.7 79 68.4
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 4.0e-26 121.7 79 64.6
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.2e-26 121.3 79 67.1
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 5.2e-26 121.3 79 69.6
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 6.7e-26 120.9 79 68.4
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.5e-25 119.8 79 65.8
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.5e-25 119.8 79 65.8
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 2.0e-25 119.4 79 68.4
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 2.0e-25 119.4 79 64.6
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 2.6e-25 119.0 79 68.4
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 2.6e-25 119.0 79 68.4
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.6e-25 119.0 79 68.4
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.3e-25 118.6 79 67.1
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 3.3e-25 118.6 79 67.1
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 5.7e-25 117.9 79 64.6
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.3e-24 116.7 79 63.3
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 2.2e-24 115.9 79 63.3
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 2.8e-24 115.5 82 65.9
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 2.8e-24 115.5 82 65.9
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.8e-24 115.5 79 63.3
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 3.7e-24 115.2 82 65.9
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 3.7e-24 115.2 82 65.9
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 3.7e-24 115.2 79 63.3
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 3.7e-24 115.2 79 63.3
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 4.8e-24 114.8 79 68.4
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.4e-23 113.2 79 63.3
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 1.4e-23 113.2 79 65.8
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.4e-23 113.2 79 63.3
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.8e-23 112.8 82 64.6
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.8e-23 112.8 79 63.3
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.8e-23 112.8 79 64.6
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.4e-23 112.5 79 58.2
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 3.1e-23 112.1 82 64.6
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 3.1e-23 112.1 79 63.3
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 5.3e-23 111.3 79 64.6
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 7.0e-23 110.9 79 64.6
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 7.0e-23 110.9 79 64.6
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.2e-22 110.2 79 60.8
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.6e-22 109.8 79 59.5
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.6e-22 109.8 79 59.5
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 1.6e-22 109.8 79 58.2
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 2.7e-22 109.0 79 59.5
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.7e-22 109.0 79 60.8
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 3.5e-22 108.6 79 63.3
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 3.5e-22 108.6 79 60.8
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 7.7e-22 107.5 79 64.6
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.3e-21 106.7 79 62.0
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 1.7e-21 106.3 79 60.8
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 5.0e-21 104.8 79 59.5
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 6.5e-21 104.4 89 57.3
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 6.5e-21 104.4 79 59.5
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 6.5e-21 104.4 79 53.2
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.1e-20 103.6 79 54.4
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 4.7e-19 98.2 78 59.0
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 6.1e-19 97.8 79 51.9
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 3.0e-18 95.5 78 53.8
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 2.0e-17 92.8 61 68.9
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.4e-15 86.7 86 44.2
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.4e-15 86.7 79 44.3
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.1e-15 85.5 53 71.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 4.1e-15 85.1 59 57.6
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.2e-14 83.6 55 72.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-14 82.8 79 45.6
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.1e-12 77.0 60 55.0
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 8.0e-11 70.9 54 53.7
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 4.4e-09 65.1 41 73.2
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.7e-08 63.2 41 73.2
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 2.2e-08 62.8 48 64.6


User provided reference genes

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