Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G013110 Citrullus lanatus HOM05D004457 ORTHO05D005282 3.3e-83 311.6 151 100.0
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 9.9e-80 300.1 151 95.4
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 1.4e-73 279.6 151 88.1
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 4.0e-57 224.9 150 67.3
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 2.0e-56 222.6 151 66.9
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 3.4e-56 221.9 151 65.6
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 1.9e-54 216.1 150 65.3
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 2.4e-54 215.7 150 66.0
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 9.3e-54 213.8 152 66.4
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 1.6e-53 213.0 151 62.9
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 2.1e-53 212.6 151 62.3
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 2.1e-53 212.6 151 64.9
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 2.7e-53 212.2 151 63.6
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 3.5e-53 211.8 151 65.6
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 7.9e-53 210.7 151 63.6
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 6.7e-52 207.6 152 62.5
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 8.7e-52 207.2 150 64.7
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 1.1e-51 206.8 148 62.8
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 1.5e-51 206.5 151 65.6
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 1.9e-51 206.1 151 60.9
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 1.9e-51 206.1 152 62.5
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 3.3e-51 205.3 151 63.6
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 9.6e-51 203.8 151 62.3
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.3e-50 203.4 148 64.9
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 1.3e-50 203.4 151 60.9
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 1.6e-50 203.0 151 61.6
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 3.7e-50 201.8 151 62.3
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 4.8e-50 201.4 151 62.9
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 4.8e-50 201.4 151 62.9
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 6.2e-50 201.1 151 60.3
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 8.1e-50 200.7 153 63.4
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 8.1e-50 200.7 153 63.4
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.4e-49 199.9 152 61.2
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.4e-49 199.9 152 61.2
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.8e-49 199.5 150 62.7
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 4.0e-49 198.4 151 62.3
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 4.0e-49 198.4 191 53.4
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 5.3e-49 198.0 152 58.6
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 5.3e-49 198.0 152 58.6
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 5.3e-49 198.0 152 61.2
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 6.9e-49 197.6 151 60.9
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 6.9e-49 197.6 151 62.3
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.5e-48 196.4 152 58.6
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 2.0e-48 196.1 151 59.6
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 3.4e-48 195.3 149 61.7
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 7.6e-48 194.1 152 58.6
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 7.6e-48 194.1 153 58.8
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 1.0e-47 193.7 151 60.9
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 1.7e-47 193.0 152 59.9
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 2.2e-47 192.6 152 59.2
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 6.5e-47 191.0 151 57.6
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 6.5e-47 191.0 151 58.9
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 8.4e-47 190.7 152 59.9
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 1.1e-46 190.3 144 59.7
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 1.4e-46 189.9 152 56.6
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 1.9e-46 189.5 169 55.0
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 2.5e-46 189.1 149 59.7
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.5e-46 189.1 145 59.3
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 3.2e-46 188.7 152 57.2
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 5.5e-46 188.0 151 60.9
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 1.2e-45 186.8 153 56.2
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 1.6e-45 186.4 151 56.3
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 1.6e-45 186.4 151 56.3
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 1.6e-45 186.4 152 59.9
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 1.6e-45 186.4 150 57.3
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 2.1e-45 186.0 151 54.3
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 2.7e-45 185.7 149 58.4
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 3.5e-45 185.3 150 56.7
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 4.6e-45 184.9 152 56.6
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 6.0e-45 184.5 152 59.2
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 6.0e-45 184.5 150 57.3
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 7.9e-45 184.1 150 57.3
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 1.0e-44 183.7 153 56.9
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 1.3e-44 183.3 149 57.7
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 1.8e-44 183.0 151 57.0
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 2.3e-44 182.6 153 55.6
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 3.9e-44 181.8 141 59.6
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 5.1e-44 181.4 153 56.2
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 6.7e-44 181.0 151 56.3
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 6.7e-44 181.0 208 45.7
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 8.7e-44 180.6 166 55.4
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 8.7e-44 180.6 151 58.9
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 8.7e-44 180.6 153 55.6
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 1.1e-43 180.3 152 58.6
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 3.3e-43 178.7 151 57.6
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 3.3e-43 178.7 151 58.3
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 3.3e-43 178.7 150 53.3
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 4.3e-43 178.3 161 52.2
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 4.3e-43 178.3 161 52.2
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 4.3e-43 178.3 150 55.3
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 7.4e-43 177.6 152 57.9
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 9.6e-43 177.2 151 59.6
Dinv29137 Davidia involucrata HOM05D004457 ORTHO05D005282 1.3e-42 176.8 127 65.4
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 1.6e-42 176.4 149 57.7
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 1.6e-42 176.4 152 56.6
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 2.1e-42 176.0 151 55.6
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 2.8e-42 175.6 153 53.6
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 4.8e-42 174.9 161 50.3
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 4.8e-42 174.9 150 52.0
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.1e-41 173.7 152 55.9
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 1.1e-41 173.7 151 55.0
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 1.4e-41 173.3 153 54.9
BolC4t27312H Brassica oleracea HOM05D004457 ORTHO05D005282 5.3e-41 171.4 152 54.6
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 5.3e-41 171.4 151 53.0
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 6.9e-41 171.0 155 54.2
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 6.9e-41 171.0 151 54.3
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 2.0e-40 169.5 151 53.0
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 1.1e-38 163.7 153 51.6
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 1.9e-38 162.9 154 48.7
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 7.2e-38 161.0 111 65.8
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 9.3e-38 160.6 153 49.7
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 6.1e-37 157.9 153 49.0
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 6.1e-37 157.9 153 51.0
Migut.F00937 Erythranthe guttata HOM05D004457 ORTHO05D005282 1.8e-36 156.4 153 49.0
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 3.0e-36 155.6 150 47.3
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 1.5e-35 153.3 191 41.4
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 3.3e-35 152.1 173 45.7
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 1.1e-33 147.1 182 42.9
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.4e-33 146.7 111 64.0
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 4.5e-32 141.7 152 49.3
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 1.1e-30 137.1 150 46.7
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 1.9e-30 136.3 151 45.7
BcaC02g08145 Brassica carinata HOM05D004457 ORTHO05D005282 3.2e-30 135.6 115 55.7
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 4.2e-30 135.2 112 61.6
Sopen03g027940 Solanum pennellii HOM05D004457 ORTHO05D005282 1.0e-28 130.6 120 50.8
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.0e-28 129.0 120 53.3
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 7.4e-27 124.4 148 47.3
ECA233G2641 Erigeron canadensis HOM05D004457 ORTHO05D005282 2.2e-26 122.9 121 52.1
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 4.8e-26 121.7 116 52.6
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 1.7e-18 96.7 77 58.4
C07p33100 Brassica napus HOM05D004457 ORTHO05D005282 2.2e-18 96.3 74 59.5
RcHm_v2.0_Chr7g0241921 Rosa chinensis HOM05D004457 ORTHO05D005282 3.7e-18 95.5 96 55.2
BcaC06g34068 Brassica carinata HOM05D004457 ORTHO05D005282 4.8e-18 95.1 74 59.5
BolC9t54837H Brassica oleracea HOM05D004457 ORTHO05D005282 4.8e-18 95.1 74 59.5
Medtr3g091660 Medicago truncatula HOM05D004457 ORTHO05D005282 4.1e-17 92.0 86 51.2
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 9.1e-17 90.9 81 54.3
CDE02G4136 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 5.9e-16 88.2 77 51.9
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 5.0e-15 85.1 109 38.5
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 3.2e-14 82.4 73 47.9
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 7.2e-14 81.3 142 35.9
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 8.0e-13 77.8 158 34.2
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 8.8e-12 74.3 134 36.6
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 2.0e-11 73.2 106 35.8
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 5.0e-07 58.5 38 63.2
arahy.Tifrunner.gnm1.ann1.G80LMI Arachis hypogaea HOM05D004457 ORTHO05D082520 1.9e-06 56.6 37 64.9
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 5.5e-06 55.1 46 52.2


User provided reference genes

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