Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G012270 Citrullus lanatus HOM05D000027 ORTHO05D012163 3.0e-196 688.3 349 100.0
ClCG11G009740 Citrullus lanatus HOM05D000027 ORTHO05D000001 1.8e-71 273.9 341 49.6
ClCG02G009730 Citrullus lanatus HOM05D000006 ORTHO05D000001 1.4e-65 254.2 353 45.0
ClCG08G000880 Citrullus lanatus HOM05D009337 ORTHO05D012163 9.7e-54 214.9 198 60.6
ClCG09G015530 Citrullus lanatus HOM05D000027 ORTHO05D000066 4.3e-46 189.5 303 42.9
ClCG09G014190 Citrullus lanatus HOM05D000006 ORTHO05D000001 6.7e-39 165.6 320 39.4
MELO3C029602.2 Cucumis melo HOM05D000006 ORTHO05D000001 2.6e-30 137.1 228 36.8
ClCG10G007170 Citrullus lanatus HOM05D000006 ORTHO05D000001 2.0e-27 127.5 188 44.7
CANSAT11G1292 Cannabis sativa HOM05D000006 ORTHO05D000001 5.5e-25 119.4 377 27.6
CANSAT80G1908 Cannabis sativa HOM05D000006 ORTHO05D000001 1.0e-23 115.2 304 29.6
CANSAT56G2615 Cannabis sativa HOM05D000006 ORTHO05D000001 2.3e-23 114.0 330 29.1
MELO3C008402.2 Cucumis melo HOM05D000006 ORTHO05D000001 4.0e-23 113.2 303 32.7
CANSAT21G1937 Cannabis sativa HOM05D000006 ORTHO05D000001 2.8e-21 107.1 281 31.7
CANSAT78G0422 Cannabis sativa HOM05D000006 ORTHO05D000001 4.8e-21 106.3 224 33.5
ClCG09G015520 Citrullus lanatus HOM05D000006 ORTHO05D000001 6.3e-21 105.9 231 34.2
CANSAT64G0990 Cannabis sativa HOM05D000003 ORTHO05D000004 8.2e-21 105.5 219 33.3
CANSAT54G1066 Cannabis sativa HOM05D000006 ORTHO05D000001 2.4e-20 104.0 303 29.4
CANSAT56G1815 Cannabis sativa HOM05D000006 ORTHO05D000001 4.1e-20 103.2 322 27.3
Oeu012266.1 Olea europaea HOM05D000006 ORTHO05D000001 5.3e-20 102.8 378 28.0
QL11p020175 Quercus lobata HOM05D011350 ORTHO05D000370 2.7e-19 100.5 322 28.6
CANSAT80G0902 Cannabis sativa HOM05D000006 ORTHO05D000001 1.0e-18 98.6 351 27.4
CANSAT35G0184 Cannabis sativa HOM05D000006 ORTHO05D000001 1.3e-18 98.2 303 28.7
CANSAT56G1128 Cannabis sativa HOM05D000006 ORTHO05D000001 5.0e-18 96.3 330 27.9
CANSAT56G1315 Cannabis sativa HOM05D000006 ORTHO05D000001 4.2e-17 93.2 239 29.7
QL04p020058 Quercus lobata HOM05D011350 ORTHO05D000001 5.5e-17 92.8 294 30.3
ClCG10G005950 Citrullus lanatus HOM05D000027 ORTHO05D012163 2.6e-14 84.0 273 31.1
ClCG05G011150 Citrullus lanatus HOM05D000027 ORTHO05D012163 1.3e-13 81.6 106 43.4
ClCG05G015090 Citrullus lanatus HOM05D000027 ORTHO05D012163 2.8e-13 80.5 63 63.5
MELO3C032096.2 Cucumis melo HOM05D000006 ORTHO05D000001 2.8e-13 80.5 129 41.1
MELO3C028877.2 Cucumis melo HOM05D003454 ORTHO05D000001 3.7e-13 80.1 112 42.0
MELO3C018244.2 Cucumis melo HOM05D000006 ORTHO05D000001 3.1e-12 77.0 190 32.6
THA.LOC104820444 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 3.1e-12 77.0 213 27.7
ClCG10G007850 Citrullus lanatus HOM05D009959 ORTHO05D012163 4.1e-12 76.6 91 44.0
MELO3C033180.2 Cucumis melo HOM05D028375 ORTHO05D000001 7.0e-12 75.9 131 40.5
Psat0s1379g0040 Pisum sativum HOM05D000006 ORTHO05D000001 7.0e-12 75.9 143 37.8
CANSAT11G2589 Cannabis sativa HOM05D000006 ORTHO05D000001 1.6e-11 74.7 111 36.9
MELO3C034002.2 Cucumis melo HOM05D000006 ORTHO05D000001 2.0e-11 74.3 102 41.2
ClCG10G008210 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.9e-11 72.8 290 26.2
RcHm_v2.0_Chr3g0456701 Rosa chinensis HOM05D000006 ORTHO05D000001 1.0e-10 72.0 295 25.4
Ca_28328_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.3e-10 71.6 194 27.8
CANSAT35G0160 Cannabis sativa HOM05D000006 ORTHO05D000001 1.7e-10 71.2 297 24.9
Atru.chr12.2495 Acer truncatum HOM05D000006 ORTHO05D000001 2.9e-10 70.5 236 25.8
THA.LOC104813272 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 2.9e-10 70.5 176 28.4
THA.LOC104810656 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 3.8e-10 70.1 176 29.0
Sopen06g005300 Solanum pennellii HOM05D000006 ORTHO05D000001 5.0e-10 69.7 289 24.6
ClCG03G010990 Citrullus lanatus HOM05D000027 ORTHO05D012163 6.5e-10 69.3 308 25.6
Sopen05g011000 Solanum pennellii HOM05D000006 ORTHO05D000001 6.5e-10 69.3 205 28.3
THA.LOC104825683 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 6.5e-10 69.3 140 32.1
Migut.I00401 Erythranthe guttata HOM05D000006 ORTHO05D000001 1.1e-09 68.6 139 30.9
Sopen10g017750 Solanum pennellii HOM05D000006 ORTHO05D000001 1.1e-09 68.6 214 28.5
Sopen03g021670 Solanum pennellii HOM05D000006 ORTHO05D000001 1.9e-09 67.8 209 28.7
CANSAT35G1977 Cannabis sativa HOM05D000003 ORTHO05D000006 3.3e-09 67.0 56 46.4
RcHm_v2.0_Chr3g0462591 Rosa chinensis HOM05D000006 ORTHO05D000001 3.3e-09 67.0 237 25.3
CiPaw.10G102300 Carya illinoinensis HOM05D000006 ORTHO05D000001 4.2e-09 66.6 325 22.8
Ca_07473_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 4.2e-09 66.6 185 27.6
Sopen10g012200 Solanum pennellii HOM05D000006 ORTHO05D000001 4.2e-09 66.6 313 26.2
CsaV3_3G005610 Cucumis sativus L. HOM05D000027 ORTHO05D012163 5.5e-09 66.2 126 33.3
Sopen12g019140 Solanum pennellii HOM05D000006 ORTHO05D000695 5.5e-09 66.2 214 27.6
THA.LOC104807981 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 5.5e-09 66.2 176 27.8
Sopen11g008660 Solanum pennellii HOM05D000006 ORTHO05D000001 7.2e-09 65.9 218 27.1
RcHm_v2.0_Chr7g0183661 Rosa chinensis HOM05D000109 ORTHO05D000001 1.2e-08 65.1 360 25.6
Sopen09g023700 Solanum pennellii HOM05D000006 ORTHO05D000001 2.1e-08 64.3 307 25.7
THA.LOC104825183 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 2.1e-08 64.3 173 29.5
Sopen05g025070 Solanum pennellii HOM05D000006 ORTHO05D000001 2.8e-08 63.9 240 27.1
Sopen10g027990 Solanum pennellii HOM05D000006 ORTHO05D000001 2.8e-08 63.9 262 26.0
CANSAT54G2260 Cannabis sativa HOM05D000006 ORTHO05D000001 3.6e-08 63.5 350 24.6
TWI39G0759 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 3.6e-08 63.5 237 28.7
CiPaw.06G091700 Carya illinoinensis HOM05D000006 ORTHO05D000001 4.7e-08 63.2 215 25.1
Sopen11g019790 Solanum pennellii HOM05D000006 ORTHO05D000001 4.7e-08 63.2 240 27.9
CiPaw.06G149500 Carya illinoinensis HOM05D017580 ORTHO05D000001 6.1e-08 62.8 263 26.6
Sopen06g011460 Solanum pennellii HOM05D000006 ORTHO05D000001 6.1e-08 62.8 317 24.6
CiPaw.06G068400 Carya illinoinensis HOM05D000006 ORTHO05D000001 8.0e-08 62.4 214 26.2
Rhsim07G0003700 Rhododendron simsii HOM05D000006 ORTHO05D000001 8.0e-08 62.4 162 27.2
Sopen07g017350 Solanum pennellii HOM05D000006 ORTHO05D000001 8.0e-08 62.4 221 27.6
arahy.Tifrunner.gnm1.ann1.4S7TQS Arachis hypogaea HOM05D000006 ORTHO05D000001 1.0e-07 62.0 218 24.8
Oeu042177.1 Olea europaea HOM05D014089 ORTHO05D011268 1.0e-07 62.0 261 26.4
Sopen05g026130 Solanum pennellii HOM05D000006 ORTHO05D000001 1.0e-07 62.0 240 27.5
Atru.chr3.2675 Acer truncatum HOM05D000006 ORTHO05D000001 1.4e-07 61.6 181 29.8
MELO3C031933.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.4e-07 61.6 76 38.2
Potri.012G061333 Populus trichocarpa HOM05D062554 ORTHO05D011268 1.4e-07 61.6 192 27.6
FvH4_4g03991 Fragaria vesca HOM05D000006 ORTHO05D000001 1.8e-07 61.2 279 24.7
Sopen00g003320 Solanum pennellii HOM05D000006 ORTHO05D000001 1.8e-07 61.2 317 25.2
Sopen01g006340 Solanum pennellii HOM05D000006 ORTHO05D000001 1.8e-07 61.2 177 27.1
Sopen11g022180 Solanum pennellii HOM05D000006 ORTHO05D000001 1.8e-07 61.2 240 27.5
QL05p044530 Quercus lobata HOM05D000006 ORTHO05D000001 2.3e-07 60.8 68 45.6
Sopen02g001810 Solanum pennellii HOM05D000006 ORTHO05D000001 2.3e-07 60.8 240 25.4
CiPaw.06G034700 Carya illinoinensis HOM05D000006 ORTHO05D000001 3.0e-07 60.5 209 24.9
Oeu017525.1 Olea europaea HOM05D000006 ORTHO05D000001 4.0e-07 60.1 221 23.1
Oeu032988.1 Olea europaea HOM05D000006 ORTHO05D000001 4.0e-07 60.1 154 29.2
Sopen01g006550 Solanum pennellii HOM05D000006 ORTHO05D000695 4.0e-07 60.1 306 21.9
Sopen04g013130 Solanum pennellii HOM05D000006 ORTHO05D000001 4.0e-07 60.1 218 27.5
Sopen05g026380 Solanum pennellii HOM05D000006 ORTHO05D000001 4.0e-07 60.1 323 24.1
Sopen06g011610 Solanum pennellii HOM05D000006 ORTHO05D000001 4.0e-07 60.1 311 25.4
MELO3C035600.2 Cucumis melo HOM05D002361 ORTHO05D016446 5.2e-07 59.7 111 36.0
FvH4_3g21841 Fragaria vesca HOM05D014123 ORTHO05D000001 5.2e-07 59.7 298 24.2
FvH4_3g37482 Fragaria vesca HOM05D014123 ORTHO05D000001 5.2e-07 59.7 298 24.2
Oeu010499.1 Olea europaea HOM05D000006 ORTHO05D000001 5.2e-07 59.7 222 22.5
Sopen04g018420 Solanum pennellii HOM05D000006 ORTHO05D000001 5.2e-07 59.7 240 27.1
Sopen08g014110 Solanum pennellii HOM05D000006 ORTHO05D000001 5.2e-07 59.7 339 25.1
Sopen12g009970 Solanum pennellii HOM05D000006 ORTHO05D000695 5.2e-07 59.7 216 25.9
Sopen12g020010 Solanum pennellii HOM05D000006 ORTHO05D000001 5.2e-07 59.7 310 25.5
TWI73G1285 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 5.2e-07 59.7 258 26.7
Sopen01g021190 Solanum pennellii HOM05D000006 ORTHO05D000001 6.8e-07 59.3 263 24.7
Sopen01g027580 Solanum pennellii HOM05D000006 ORTHO05D000001 6.8e-07 59.3 250 26.0
Oeu047318.1 Olea europaea HOM05D000006 ORTHO05D000001 8.9e-07 58.9 154 28.6
MELO3C003289.2 Cucumis melo HOM05D000006 ORTHO05D000001 1.2e-06 58.5 105 34.3
Sopen01g024530 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen01g028850 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen02g010420 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen03g017070 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen03g018080 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen04g008310 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen04g025380 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen05g014820 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen06g009350 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen06g016440 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen06g019150 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen06g032590 Solanum pennellii HOM05D000006 ORTHO05D000695 1.2e-06 58.5 320 22.2
Sopen06g032610 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 320 22.2
Sopen07g008670 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen09g022810 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Sopen12g022930 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-06 58.5 240 26.2
Gorai.006G054400 Gossypium raimondii HOM05D000006 ORTHO05D000001 1.5e-06 58.2 105 34.3
Sopen05g025510 Solanum pennellii HOM05D000006 ORTHO05D000001 1.5e-06 58.2 230 23.9
Sopen12g008580 Solanum pennellii HOM05D000006 ORTHO05D000001 1.5e-06 58.2 205 26.3
CANSAT11G1885 Cannabis sativa HOM05D000006 ORTHO05D000001 2.0e-06 57.8 147 29.3
Ca_18132_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.0e-06 57.8 169 26.6
CANSAT01G1590 Cannabis sativa HOM05D000006 ORTHO05D000001 2.6e-06 57.4 276 23.6
Oeu004969.1 Olea europaea HOM05D000006 ORTHO05D000001 2.6e-06 57.4 222 21.6
THA.LOC104825438 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 2.6e-06 57.4 214 25.7
THA.LOC109117030 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 2.6e-06 57.4 162 27.8
Gorai.004G098500 Gossypium raimondii HOM05D000006 ORTHO05D033577 3.4e-06 57.0 80 42.5
Oeu063054.1 Olea europaea HOM05D000006 ORTHO05D000001 3.4e-06 57.0 154 27.9
arahy.Tifrunner.gnm1.ann1.JNZ3J0 Arachis hypogaea HOM05D000006 ORTHO05D000001 4.4e-06 56.6 145 26.9
Oeu031886.1 Olea europaea HOM05D000006 ORTHO05D000001 4.4e-06 56.6 222 23.0
Oeu062749.1 Olea europaea HOM05D000006 ORTHO05D000001 4.4e-06 56.6 154 27.3
Sopen10g019550 Solanum pennellii HOM05D000006 ORTHO05D000001 4.4e-06 56.6 321 24.3
Manes.12G103911 Manihot esculenta HOM05D000006 ORTHO05D000001 5.7e-06 56.2 312 23.1
CiPaw.01G148100 Carya illinoinensis HOM05D000006 ORTHO05D000001 7.5e-06 55.8 324 24.7
Sopen08g005250 Solanum pennellii HOM05D000006 ORTHO05D000001 7.5e-06 55.8 306 23.5
THA.LOC104825833 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 7.5e-06 55.8 172 26.7
Ca_02816_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 9.8e-06 55.5 227 22.9
Gorai.007G269000 Gossypium raimondii HOM05D000006 ORTHO05D000001 9.8e-06 55.5 56 48.2
Oeu055842.1 Olea europaea HOM05D000006 ORTHO05D000001 9.8e-06 55.5 155 26.5
Oeu057440.1 Olea europaea HOM05D000006 ORTHO05D000001 9.8e-06 55.5 154 26.6


User provided reference genes

Program Settings